RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C CDC48P25694 835 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C ZUO1P32527 433 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C YKL100CP34248 587 aa3.66□□□□□ -1.82
TRS120YDR407C STB4P50104 949 aa3.66□□□□□ -1.82
TRS120YDR407C ALT2P52892 507 aa3.66□□□□□ -1.82
TRS120YDR407C HOP2P53187 214 aa3.66□□□□□ -1.82
TRS120YDR407C YLH47Q06493 454 aa3.66□□□□□ -1.82
TRS120YDR407C GPM2Q12008 311 aa3.66□□□□□ -1.82
TRS120YDR407C ATG11Q12527 1178 aa3.66□□□□□ -1.82
TRS120YDR407C HSP60P19882 572 aaKnown RBP3.66□□□□□ -1.82
TRS120YDR407C SWE1P32944 819 aa3.66□□□□□ -1.82
TRS120YDR407C HSP78P33416 811 aa3.66□□□□□ -1.82
TRS120YDR407C LHS1P36016 881 aa3.66□□□□□ -1.82
TRS120YDR407C ALY1P36117 915 aa3.66□□□□□ -1.82
TRS120YDR407C MXR1P40029 184 aa3.66□□□□□ -1.82
TRS120YDR407C NCS6P53088 359 aa3.66□□□□□ -1.82
TRS120YDR407C TOF2Q02208 771 aa3.66□□□□□ -1.82
TRS120YDR407C SND1Q04007 877 aa3.66□□□□□ -1.82
TRS120YDR407C FMP25Q08023 583 aa3.66□□□□□ -1.82
TRS120YDR407C PEX15Q08215 383 aa3.66□□□□□ -1.82
TRS120YDR407C JLP1Q12358 412 aa3.66□□□□□ -1.82
TRS120YDR407C GFD2P25370 566 aaKnown RBP3.65□□□□□ -1.82
TRS120YDR407C BUD23P25627 275 aaPredicted RBP3.65□□□□□ -1.82
TRS120YDR407C URA10P30402 227 aa3.65□□□□□ -1.82
TRS120YDR407C HXT3P32466 567 aaKnown RBP3.65□□□□□ -1.82
TRS120YDR407C RRN6P32786 894 aa3.65□□□□□ -1.82
TRS120YDR407C SMY2P32909 740 aaKnown RBP3.65□□□□□ -1.82
TRS120YDR407C PHO89P38361 574 aa3.65□□□□□ -1.82
TRS120YDR407C STN1P38960 494 aa3.65□□□□□ -1.82
TRS120YDR407C ERV46P39727 415 aa3.65□□□□□ -1.82
TRS120YDR407C RMR1P53060 241 aa3.65□□□□□ -1.82
TRS120YDR407C NOP13P53883 403 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
TRS120YDR407C YNL011CP53980 444 aa3.65□□□□□ -1.82
TRS120YDR407C SDH1Q00711 640 aa3.65□□□□□ -1.82
TRS120YDR407C TRM44Q02648 567 aaKnown RBP3.65□□□□□ -1.82
TRS120YDR407C PFA5Q03289 374 aa3.65□□□□□ -1.82
TRS120YDR407C MDM38Q08179 573 aa3.65□□□□□ -1.82
TRS120YDR407C GPB1Q08886 897 aa3.65□□□□□ -1.82
TRS120YDR407C MLH3Q12083 715 aa3.65□□□□□ -1.82
TRS120YDR407C TY4A-HQ6Q5P6 413 aa3.65□□□□□ -1.82
TRS120YDR407C MIS1P09440 975 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C SWI6P09959 803 aa3.65□□□□□ -1.83
TRS120YDR407C RPL4AP10664 362 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C MRP13P12686 339 aa3.65□□□□□ -1.83
TRS120YDR407C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
TRS120YDR407C PHA2P32452 334 aa3.65□□□□□ -1.83
TRS120YDR407C RGT1P32862 1170 aa3.65□□□□□ -1.83
TRS120YDR407C FSH1P38777 243 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C SFB3P38810 929 aa3.65□□□□□ -1.83
TRS120YDR407C NUP60P39705 539 aa3.65□□□□□ -1.83
TRS120YDR407C VAB2P40003 282 aa3.65□□□□□ -1.83
TRS120YDR407C PTR3P43606 678 aa3.65□□□□□ -1.83
TRS120YDR407C DAN4P47179 1161 aa3.65□□□□□ -1.83
TRS120YDR407C RPL4BP49626 362 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C RRT6P53117 311 aaPredicted RBP3.65□□□□□ -1.83
TRS120YDR407C GPD1Q00055 391 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C SED5Q01590 340 aa3.65□□□□□ -1.83
TRS120YDR407C PEX29Q03370 554 aa3.65□□□□□ -1.83
TRS120YDR407C TAF11Q04226 346 aa3.65□□□□□ -1.83
TRS120YDR407C NPP1P25353 742 aa3.65□□□□□ -1.83
TRS120YDR407C ECM8P38246 354 aa3.65□□□□□ -1.83
TRS120YDR407C FRT2P39734 528 aa3.65□□□□□ -1.83
TRS120YDR407C EAF5P39995 279 aa3.65□□□□□ -1.83
TRS120YDR407C BUD13P46947 266 aaPredicted RBP3.65□□□□□ -1.83
TRS120YDR407C SET2P46995 733 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C ALT1P52893 592 aa3.65□□□□□ -1.83
TRS120YDR407C ARO8P53090 500 aaKnown RBP3.65□□□□□ -1.83
TRS120YDR407C YGR283CP53336 341 aaPredicted RBP3.65□□□□□ -1.83
TRS120YDR407C YKU80Q04437 629 aa3.65□□□□□ -1.83
TRS120YDR407C CDD1Q06549 142 aa3.65□□□□□ -1.83
TRS120YDR407C MET4P32389 672 aa3.64□□□□□ -1.83
TRS120YDR407C POA1P38218 177 aa3.64□□□□□ -1.83
TRS120YDR407C GIP1P38229 639 aa3.64□□□□□ -1.83
TRS120YDR407C YBR053CP38235 358 aa3.64□□□□□ -1.83
TRS120YDR407C VID24P38263 362 aa3.64□□□□□ -1.83
TRS120YDR407C YHL008CP38750 627 aa3.64□□□□□ -1.83
TRS120YDR407C MRM2P53123 320 aa3.64□□□□□ -1.83
TRS120YDR407C NOP19P53317 196 aaPredicted RBP3.64□□□□□ -1.83
TRS120YDR407C ASI1P54074 624 aa3.64□□□□□ -1.83
TRS120YDR407C SPO19Q03029 223 aa3.64□□□□□ -1.83
TRS120YDR407C YDR124WQ04608 324 aa3.64□□□□□ -1.83
TRS120YDR407C NOC3Q07896 663 aaPredicted RBP3.64□□□□□ -1.83
TRS120YDR407C BUD20Q08004 166 aaPredicted RBP3.64□□□□□ -1.83
TRS120YDR407C BSC1Q12140 328 aa3.64□□□□□ -1.83
TRS120YDR407C YPL247CQ12523 523 aa3.64□□□□□ -1.83
TRS120YDR407C AI5_ALPHAQ9ZZX1 630 aa3.64□□□□□ -1.83
TRS120YDR407C CCP1P00431 361 aa3.64□□□□□ -1.83
TRS120YDR407C HMG2P12684 1045 aa3.64□□□□□ -1.83
TRS120YDR407C SNT1P25357 1226 aa3.64□□□□□ -1.83
TRS120YDR407C HRR25P29295 494 aaKnown RBP3.64□□□□□ -1.83
TRS120YDR407C MRPL6P32904 214 aa3.64□□□□□ -1.83
TRS120YDR407C PDX3P38075 228 aaKnown RBP3.64□□□□□ -1.83
TRS120YDR407C AGP2P38090 596 aa3.64□□□□□ -1.83
TRS120YDR407C YHR112CP38716 378 aa3.64□□□□□ -1.83
TRS120YDR407C YIL089WP40500 205 aa3.64□□□□□ -1.83
TRS120YDR407C STB1P42845 420 aa3.64□□□□□ -1.83
TRS120YDR407C NUP85P46673 744 aa3.64□□□□□ -1.83
TRS120YDR407C YDR132CQ03900 495 aa3.64□□□□□ -1.83
TRS120YDR407C HFD1Q04458 532 aa3.64□□□□□ -1.83
TRS120YDR407C SSQ1Q05931 657 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms