RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A YNR071CP53757 342 aa2.42□□□□□ -2.02
VMA9YCL005W-A SQS1P53866 767 aaKnown RBP2.42□□□□□ -2.02
VMA9YCL005W-A YNL144CP53907 740 aa2.42□□□□□ -2.02
VMA9YCL005W-A GTR1Q00582 310 aa2.42□□□□□ -2.02
VMA9YCL005W-A CIK1Q01649 594 aa2.42□□□□□ -2.02
VMA9YCL005W-A FDC1Q03034 503 aa2.42□□□□□ -2.02
VMA9YCL005W-A CEF1Q03654 590 aaPredicted RBP2.42□□□□□ -2.02
VMA9YCL005W-A FAR8Q05040 523 aa2.42□□□□□ -2.02
VMA9YCL005W-A YDR341CQ05506 607 aaKnown RBP2.42□□□□□ -2.02
VMA9YCL005W-A FUS2Q05670 677 aa2.42□□□□□ -2.02
VMA9YCL005W-A MRD1Q06106 887 aaKnown RBP2.42□□□□□ -2.02
VMA9YCL005W-A IRC10Q08118 586 aa2.42□□□□□ -2.02
VMA9YCL005W-A PSK2Q08217 1101 aa2.42□□□□□ -2.02
VMA9YCL005W-A ABP140Q08641 628 aaKnown RBP2.42□□□□□ -2.02
VMA9YCL005W-A VIK1Q12045 647 aa2.42□□□□□ -2.02
VMA9YCL005W-A SGT2Q12118 346 aaKnown RBP2.42□□□□□ -2.02
VMA9YCL005W-A TAF3Q12297 353 aa2.42□□□□□ -2.02
VMA9YCL005W-A NOT5Q12514 560 aaPredicted RBP2.42□□□□□ -2.02
VMA9YCL005W-A LSO2Q3E772 92 aaKnown RBP2.42□□□□□ -2.02
VMA9YCL005W-A ESP1Q03018 1630 aa2.42□□□□□ -2.02
VMA9YCL005W-A BPT1P14772 1559 aa2.41□□□□□ -2.02
VMA9YCL005W-A SSK2P53599 1579 aa2.41□□□□□ -2.02
VMA9YCL005W-A GEA2P39993 1459 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A YOR1P53049 1477 aa2.41□□□□□ -2.02
VMA9YCL005W-A SIR4P11978 1358 aa2.41□□□□□ -2.02
VMA9YCL005W-A ROM2P51862 1356 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A PHO5P00635 467 aa2.41□□□□□ -2.02
VMA9YCL005W-A REP1P03871 373 aa2.41□□□□□ -2.02
VMA9YCL005W-A GAL1P04385 528 aa2.41□□□□□ -2.02
VMA9YCL005W-A RPL6BP05739 176 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A MSS116P15424 664 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A SEN2P16658 377 aa2.41□□□□□ -2.02
VMA9YCL005W-A CLN1P20437 546 aa2.41□□□□□ -2.02
VMA9YCL005W-A KIN3P22209 435 aa2.41□□□□□ -2.02
VMA9YCL005W-A PHO3P24031 467 aa2.41□□□□□ -2.02
VMA9YCL005W-A KCC4P25389 1037 aa2.41□□□□□ -2.02
VMA9YCL005W-A YCR016WP25617 290 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A VPH2P32341 215 aa2.41□□□□□ -2.02
VMA9YCL005W-A CBF2P32504 956 aa2.41□□□□□ -2.02
VMA9YCL005W-A SMI1P32566 505 aa2.41□□□□□ -2.02
VMA9YCL005W-A SRB4P32569 687 aa2.41□□□□□ -2.02
VMA9YCL005W-A SSE1P32589 693 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A NPL6P32832 435 aa2.41□□□□□ -2.02
VMA9YCL005W-A SEC66P33754 206 aa2.41□□□□□ -2.02
VMA9YCL005W-A NIC96P34077 839 aa2.41□□□□□ -2.02
VMA9YCL005W-A PTH2P34222 208 aa2.41□□□□□ -2.02
VMA9YCL005W-A PEX5P35056 612 aa2.41□□□□□ -2.02
VMA9YCL005W-A NUP120P35729 1037 aa2.41□□□□□ -2.02
VMA9YCL005W-A YMC2P38087 329 aa2.41□□□□□ -2.02
VMA9YCL005W-A FZO1P38297 855 aa2.41□□□□□ -2.02
VMA9YCL005W-A KAP123P40069 1113 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A EMP65P40085 556 aa2.41□□□□□ -2.02
VMA9YCL005W-A VID27P40157 782 aa2.41□□□□□ -2.02
VMA9YCL005W-A ARG2P40360 574 aa2.41□□□□□ -2.02
VMA9YCL005W-A UTP18P40362 594 aaPredicted RBP2.41□□□□□ -2.02
VMA9YCL005W-A GVP36P40531 326 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A INA22P40576 216 aa2.41□□□□□ -2.02
VMA9YCL005W-A PHB1P40961 287 aa2.41□□□□□ -2.02
VMA9YCL005W-A LAM5P43560 674 aa2.41□□□□□ -2.02
VMA9YCL005W-A FYV8P46949 817 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A TAH11P47112 604 aa2.41□□□□□ -2.02
VMA9YCL005W-A CTR1P49573 406 aa2.41□□□□□ -2.02
VMA9YCL005W-A VPS73P53142 486 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A PEF1P53238 335 aa2.41□□□□□ -2.02
VMA9YCL005W-A HOL1P53389 586 aa2.41□□□□□ -2.02
VMA9YCL005W-A BET4Q00618 327 aa2.41□□□□□ -2.02
VMA9YCL005W-A ACS1Q01574 713 aa2.41□□□□□ -2.02
VMA9YCL005W-A MET14Q02196 202 aa2.41□□□□□ -2.02
VMA9YCL005W-A GIR2Q03768 265 aaPredicted RBP2.41□□□□□ -2.02
VMA9YCL005W-A KRE28Q04431 385 aa2.41□□□□□ -2.02
VMA9YCL005W-A YKU80Q04437 629 aa2.41□□□□□ -2.02
VMA9YCL005W-A SPC24Q04477 213 aa2.41□□□□□ -2.02
VMA9YCL005W-A HCR1Q05775 265 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A NKP2Q06162 153 aa2.41□□□□□ -2.02
VMA9YCL005W-A ARR3Q06598 404 aa2.41□□□□□ -2.02
VMA9YCL005W-A RIX7Q07844 837 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A MSH5Q12175 901 aa2.41□□□□□ -2.02
VMA9YCL005W-A MSL5Q12186 476 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
VMA9YCL005W-A RUP1Q12242 671 aa2.41□□□□□ -2.02
VMA9YCL005W-A CLF1Q12309 687 aaPredicted RBP2.41□□□□□ -2.02
VMA9YCL005W-A DBP10Q12389 995 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A HIR3P47171 1648 aa2.41□□□□□ -2.02
VMA9YCL005W-A PDR5P33302 1511 aaKnown RBP2.41□□□□□ -2.02
VMA9YCL005W-A HSL1P34244 1518 aa2.41□□□□□ -2.02
VMA9YCL005W-A VPS15P22219 1454 aa2.4□□□□□ -2.02
VMA9YCL005W-A SSC1P0CS90 654 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A STE12P13574 688 aa2.4□□□□□ -2.03
VMA9YCL005W-A NMT1P14743 455 aa2.4□□□□□ -2.03
VMA9YCL005W-A KRS1P15180 591 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A PRP16P15938 1071 aaPredicted RBP2.4□□□□□ -2.03
VMA9YCL005W-A APA1P16550 321 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A SPE2P21182 396 aa2.4□□□□□ -2.03
VMA9YCL005W-A VMA8P32610 256 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A UBC6P33296 250 aaPredicted RBP2.4□□□□□ -2.03
VMA9YCL005W-A LOS1P33418 1100 aaPredicted RBP2.4□□□□□ -2.03
VMA9YCL005W-A GLG1P36143 616 aa2.4□□□□□ -2.03
VMA9YCL005W-A YNG2P38806 282 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A TDA11P38854 504 aa2.4□□□□□ -2.03
VMA9YCL005W-A SPC72P39723 622 aa2.4□□□□□ -2.03
VMA9YCL005W-A LRO1P40345 661 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms