RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YDL242WQ07746 117 aa9.15□□□□□ -0.94
NME1NME1 FUM1P08417 488 aaKnown RBP9.14□□□□□ -0.95
NME1NME1 GDA1P32621 518 aa9.14□□□□□ -0.95
NME1NME1 RPF2P36160 344 aaKnown RBP9.14□□□□□ -0.95
NME1NME1 DPH1P40487 425 aaKnown RBP9.14□□□□□ -0.95
NME1NME1 YML119WQ03208 357 aa9.14□□□□□ -0.95
NME1NME1 WAR1Q03631 944 aa9.14□□□□□ -0.95
NME1NME1 ATG23Q06671 453 aa9.14□□□□□ -0.95
NME1NME1 IRC10Q08118 586 aa9.14□□□□□ -0.95
NME1NME1 SWT1Q12104 458 aa9.14□□□□□ -0.95
NME1NME1 NBP2Q12163 236 aa9.14□□□□□ -0.95
NME1NME1 RPN13O13563 156 aa9.13□□□□□ -0.95
NME1NME1 FUN12P39730 1002 aaKnown RBP9.13□□□□□ -0.95
NME1NME1 BUD16P39988 312 aa9.13□□□□□ -0.95
NME1NME1 YGR079WP53249 370 aa9.13□□□□□ -0.95
NME1NME1 ERG27Q12452 347 aaKnown RBP9.13□□□□□ -0.95
NME1NME1 ENT1Q12518 454 aa9.13□□□□□ -0.95
NME1NME1 TDP1P38319 544 aa9.12□□□□□ -0.95
NME1NME1 VPS8P39702 1274 aa9.12□□□□□ -0.95
NME1NME1 IMO32P53219 342 aa9.12□□□□□ -0.95
NME1NME1 MRI1Q06489 411 aaKnown RBP9.12□□□□□ -0.95
NME1NME1 TMA16Q08687 178 aa9.12□□□□□ -0.95
NME1NME1 RPL7AP05737 244 aaKnown RBP9.11□□□□□ -0.95
NME1NME1 LRE1P25579 583 aaKnown RBP9.11□□□□□ -0.95
NME1NME1 MUD2P36084 527 aaKnown RBP9.11□□□□□ -0.95
NME1NME1 OPT1P40897 799 aa9.11□□□□□ -0.95
NME1NME1 STU2P46675 888 aa9.11□□□□□ -0.95
NME1NME1 REG1Q00816 1014 aa9.11□□□□□ -0.95
NME1NME1 AAT1Q01802 451 aa9.11□□□□□ -0.95
NME1NME1 RPL7BQ12213 244 aaKnown RBP9.11□□□□□ -0.95
NME1NME1 LCB4Q12246 624 aa9.11□□□□□ -0.95
NME1NME1 AHA1Q12449 350 aaKnown RBP9.11□□□□□ -0.95
NME1NME1 RPA135P22138 1203 aaKnown RBP9.1□□□□□ -0.95
NME1NME1 SAT4P25333 603 aaKnown RBP9.1□□□□□ -0.95
NME1NME1 EMP70P32802 667 aa9.1□□□□□ -0.95
NME1NME1 YEL068CP39977 110 aa9.1□□□□□ -0.95
NME1NME1 YML053CQ04978 212 aa9.1□□□□□ -0.95
NME1NME1 PCL8Q08966 492 aa9.1□□□□□ -0.95
NME1NME1 PMA2P19657 947 aa9.09□□□□□ -0.95
NME1NME1 UGP1P32861 499 aaKnown RBP9.09□□□□□ -0.95
NME1NME1 YEL020CP39994 560 aa9.09□□□□□ -0.95
NME1NME1 YFL015CP43578 164 aa9.09□□□□□ -0.95
NME1NME1 UBX6P47049 396 aa9.09□□□□□ -0.95
NME1NME1 BSC5P53755 489 aa9.09□□□□□ -0.95
NME1NME1 MSL5Q12186 476 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
NME1NME1 PRS5Q12265 496 aaKnown RBP9.09□□□□□ -0.95
NME1NME1 YMR084WA2P2R3 262 aa9.08□□□□□ -0.96
NME1NME1 HSC82P15108 705 aaKnown RBP9.08□□□□□ -0.96
NME1NME1 PAH1P32567 862 aa9.08□□□□□ -0.96
NME1NME1 YIL166CP40445 542 aa9.08□□□□□ -0.96
NME1NME1 DJP1P40564 432 aa9.08□□□□□ -0.96
NME1NME1 VPS4P52917 437 aa9.08□□□□□ -0.96
NME1NME1 GIS1Q03833 894 aa9.08□□□□□ -0.96
NME1NME1 RCO1Q04779 684 aa9.08□□□□□ -0.96
NME1NME1 NUS1Q12063 375 aa9.08□□□□□ -0.96
NME1NME1 SKM1Q12469 655 aa9.08□□□□□ -0.96
NME1NME1 SPO11P23179 398 aa9.07□□□□□ -0.96
NME1NME1 ERC1P38767 581 aa9.07□□□□□ -0.96
NME1NME1 YJR061WP40355 935 aa9.07□□□□□ -0.96
NME1NME1 NPA3P47122 385 aa9.07□□□□□ -0.96
NME1NME1 RAD33Q04231 177 aa9.07□□□□□ -0.96
NME1NME1 PLM2Q04383 521 aa9.07□□□□□ -0.96
NME1NME1 ARG7Q04728 441 aa9.07□□□□□ -0.96
NME1NME1 ULA1Q12059 462 aa9.07□□□□□ -0.96
NME1NME1 CDC16P09798 840 aa9.06□□□□□ -0.96
NME1NME1 YML003WP0CF16 290 aa9.06□□□□□ -0.96
NME1NME1 SAN1P22470 610 aa9.06□□□□□ -0.96
NME1NME1 ERG8P24521 451 aa9.06□□□□□ -0.96
NME1NME1 IMP2'P32351 346 aa9.06□□□□□ -0.96
NME1NME1 MRP20P32387 263 aa9.06□□□□□ -0.96
NME1NME1 NOP16P40007 231 aaKnown RBP9.06□□□□□ -0.96
NME1NME1 PFK26P40433 827 aaKnown RBP9.06□□□□□ -0.96
NME1NME1 MRK1P50873 501 aa9.06□□□□□ -0.96
NME1NME1 APM1Q00776 475 aaPredicted RBP9.06□□□□□ -0.96
NME1NME1 YPL191CQ08930 360 aa9.06□□□□□ -0.96
NME1NME1 COX1P00401 534 aa9.05□□□□□ -0.96
NME1NME1 RPB2P08518 1224 aaKnown RBP9.05□□□□□ -0.96
NME1NME1 RFA2P26754 273 aaKnown RBP9.05□□□□□ -0.96
NME1NME1 TFC3P34111 1160 aa9.05□□□□□ -0.96
NME1NME1 SAP1P39955 897 aaKnown RBP9.05□□□□□ -0.96
NME1NME1 VCX1Q99385 411 aa9.05□□□□□ -0.96
NME1NME1 AI5_ALPHAQ9ZZX1 630 aa9.05□□□□□ -0.96
NME1NME1 RRP43P25359 394 aaPredicted RBP9.04□□□□□ -0.96
NME1NME1 AAD3P25612 363 aa9.04□□□□□ -0.96
NME1NME1 HES1P35843 434 aa9.04□□□□□ -0.96
NME1NME1 GEX2P36173 615 aa9.04□□□□□ -0.96
NME1NME1 PSD1P39006 500 aa9.04□□□□□ -0.96
NME1NME1 UBP7P40453 1071 aa9.04□□□□□ -0.96
NME1NME1 BAG7Q12128 409 aa9.04□□□□□ -0.96
NME1NME1 ADE5,7P07244 802 aaKnown RBP9.03□□□□□ -0.96
NME1NME1 HEM1P09950 548 aaPredicted RBP9.03□□□□□ -0.96
NME1NME1 LAC1P28496 418 aa9.03□□□□□ -0.96
NME1NME1 VBA2P38358 474 aaKnown RBP9.03□□□□□ -0.96
NME1NME1 Q0010Q9ZZX9 128 aa9.03□□□□□ -0.96
NME1NME1 YMC1P32331 307 aa9.02□□□□□ -0.97
NME1NME1 TDA10P42938 290 aa9.02□□□□□ -0.97
NME1NME1 ARC1P46672 376 aaKnown RBP9.02□□□□□ -0.97
NME1NME1 YDR109CQ04585 715 aa9.02□□□□□ -0.97
NME1NME1 SEM1O94742 89 aa9.01□□□□□ -0.97
NME1NME1 AAC3P18238 307 aa9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms