RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 NbdyA0A0N4SUI7 68 aa12.8□□□□□ -0.36
Trim9-208ENSMUST00000221370 Adm2Q7TNK8 150 aa12.73□□□□□ -0.37
Trim9-208ENSMUST00000221370 Defb39Q70KL3 74 aa12.72□□□□□ -0.37
Trim9-208ENSMUST00000221370 PlecQ9QXS1 4691 aaKnown RBP12.71□□□□□ -0.37
Trim9-208ENSMUST00000221370 Gm10643Q3URG9 111 aa12.71□□□□□ -0.37
Trim9-208ENSMUST00000221370 Gm20661K7N787 53 aa12.71□□□□□ -0.38
Trim9-208ENSMUST00000221370 Ccdc179J3QM76 67 aa12.7□□□□□ -0.38
Trim9-208ENSMUST00000221370 Defb38Q7TNV7 63 aa12.69□□□□□ -0.38
Trim9-208ENSMUST00000221370 PrkdcP97313 4128 aa12.68□□□□□ -0.38
Trim9-208ENSMUST00000221370 Tnp2P11378 117 aa12.66□□□□□ -0.38
Trim9-208ENSMUST00000221370 Anapc11Q9CPX9 84 aa12.66□□□□□ -0.38
Trim9-208ENSMUST00000221370 Gpr15lA0A0B4J1N3 78 aa12.64□□□□□ -0.39
Trim9-208ENSMUST00000221370 Ndufb1P0DN34 57 aa12.63□□□□□ -0.39
Trim9-208ENSMUST00000221370 Sec61gP60060 68 aa12.6□□□□□ -0.39
Trim9-208ENSMUST00000221370 SptssbQ925E8 76 aa12.56□□□□□ -0.4
Trim9-208ENSMUST00000221370 1600014C23RikQ9DAX4 101 aa12.55□□□□□ -0.4
Trim9-208ENSMUST00000221370 Pkd1l1Q8R526 2615 aa12.54□□□□□ -0.4
Trim9-208ENSMUST00000221370 Gm9507D3Z5T3 223 aa12.54□□□□□ -0.4
Trim9-208ENSMUST00000221370 Gm9918Q8BUR5 174 aa12.54□□□□□ -0.4
Trim9-208ENSMUST00000221370 Krtap14O08640 167 aa12.53□□□□□ -0.4
Trim9-208ENSMUST00000221370 Gm21798J3QNU5 87 aa12.52□□□□□ -0.4
Trim9-208ENSMUST00000221370 Defb13Q8R2I4 64 aa12.51□□□□□ -0.41
Trim9-208ENSMUST00000221370 Cypt15B1AXS0 87 aa12.49□□□□□ -0.41
Trim9-208ENSMUST00000221370 Limd2Q8BGB5 128 aa12.49□□□□□ -0.41
Trim9-208ENSMUST00000221370 Hectd4E9Q2E4 4418 aa12.46□□□□□ -0.41
Trim9-208ENSMUST00000221370 Uqcr11Q9CPX8 56 aa12.45□□□□□ -0.42
Trim9-208ENSMUST00000221370 Dnah7cA0A087WR13 4024 aa12.45□□□□□ -0.42
Trim9-208ENSMUST00000221370 Dnah5Q8VHE6 4621 aa12.43□□□□□ -0.42
Trim9-208ENSMUST00000221370 Gm3646F6S692 53 aa12.4□□□□□ -0.42
Trim9-208ENSMUST00000221370 2310050C09RikG5E8Z3 280 aa12.39□□□□□ -0.43
Trim9-208ENSMUST00000221370 9230102O04RikA2ASX7 82 aa12.37□□□□□ -0.43
Trim9-208ENSMUST00000221370 Dnah2P0C6F1 4456 aa12.34□□□□□ -0.43
Trim9-208ENSMUST00000221370 Gm26620Q9CY65 116 aa12.34□□□□□ -0.43
Trim9-208ENSMUST00000221370 1700042G07RikB1AUF7 90 aa12.33□□□□□ -0.44
Trim9-208ENSMUST00000221370 Spaca4Q80ZQ0 127 aa12.33□□□□□ -0.44
Trim9-208ENSMUST00000221370 Vps13dB1ART2 4390 aa12.32□□□□□ -0.44
Trim9-208ENSMUST00000221370 Ly6g6cQ9Z1Q4 126 aa12.31□□□□□ -0.44
Trim9-208ENSMUST00000221370 Dnah7aE9Q0T8 4024 aa12.25□□□□□ -0.45
Trim9-208ENSMUST00000221370 Gm10999F6Q4M4 69 aa12.22□□□□□ -0.45
Trim9-208ENSMUST00000221370 ApobE9Q414 4505 aa12.22□□□□□ -0.45
Trim9-208ENSMUST00000221370 Defb11Q8R2I7 77 aa12.21□□□□□ -0.45
Trim9-208ENSMUST00000221370 Pkd1O08852 4293 aa12.2□□□□□ -0.46
Trim9-208ENSMUST00000221370 Stard9Q80TF6 4561 aa12.16□□□□□ -0.46
Trim9-208ENSMUST00000221370 Krtap13O88375 197 aa12.16□□□□□ -0.46
Trim9-208ENSMUST00000221370 2310034C09RikQ9D746 214 aa12.15□□□□□ -0.46
Trim9-208ENSMUST00000221370 Wfdc3Q14AE4 130 aa12.14□□□□□ -0.47
Trim9-208ENSMUST00000221370 Q8BGJ3 129 aa12.13□□□□□ -0.47
Trim9-208ENSMUST00000221370 Krtap10-4Q08EG8 221 aa12.13□□□□□ -0.47
Trim9-208ENSMUST00000221370 2310079G19RikQ9D6L6 185 aa12.12□□□□□ -0.47
Trim9-208ENSMUST00000221370 Lrp1bQ9JI18 4599 aa12.1□□□□□ -0.47
Trim9-208ENSMUST00000221370 Krtap3-2Q9D638 99 aa12.05□□□□□ -0.48
Trim9-208ENSMUST00000221370 Krtap3-3Q9D7P0 99 aa12.05□□□□□ -0.48
Trim9-208ENSMUST00000221370 A930033H14RikG5E8X6 103 aa12.01□□□□□ -0.49
Trim9-208ENSMUST00000221370 Ndufs5Q99LY9 106 aa12.01□□□□□ -0.49
Trim9-208ENSMUST00000221370 FcgbpE9Q0B5 2583 aa11.99□□□□□ -0.49
Trim9-208ENSMUST00000221370 4930507D05RikQ8C9C9 103 aa11.96□□□□□ -0.5
Trim9-208ENSMUST00000221370 Pkhd1E9PZ36 4059 aa11.94□□□□□ -0.5
Trim9-208ENSMUST00000221370 Defb1P56386 69 aa11.91□□□□□ -0.5
Trim9-208ENSMUST00000221370 Rps29P62274 56 aa11.85□□□□□ -0.51
Trim9-208ENSMUST00000221370 D6Ertd527eA0A0N4SWI3 464 aa11.83□□□□□ -0.52
Trim9-208ENSMUST00000221370 SacsQ9JLC8 4582 aa11.81□□□□□ -0.52
Trim9-208ENSMUST00000221370 Gm4491E0CX42 125 aa11.79□□□□□ -0.52
Trim9-208ENSMUST00000221370 Krtap10-10A0A1W2P7T6 217 aa11.77□□□□□ -0.52
Trim9-208ENSMUST00000221370 Gm9821Q8K076 103 aa11.77□□□□□ -0.53
Trim9-208ENSMUST00000221370 Fat2Q5F226 4351 aa11.76□□□□□ -0.53
Trim9-208ENSMUST00000221370 Gm2696A0A1W2P709 240 aa11.72□□□□□ -0.53
Trim9-208ENSMUST00000221370 Pla2g10Q9QXX3 151 aa11.71□□□□□ -0.53
Trim9-208ENSMUST00000221370 Gm11939A2A592 99 aa11.69□□□□□ -0.54
Trim9-208ENSMUST00000221370 OxtP35454 125 aa11.67□□□□□ -0.54
Trim9-208ENSMUST00000221370 Fat1A0A1L1SQU7 4645 aa11.65□□□□□ -0.54
Trim9-208ENSMUST00000221370 Dync1h1Q9JHU4 4644 aaKnown RBP11.6□□□□□ -0.55
Trim9-208ENSMUST00000221370 Cox6b2Q80ZN9 88 aa11.5□□□□□ -0.57
Trim9-208ENSMUST00000221370 RetnlbQ99P86 105 aa11.5□□□□□ -0.57
Trim9-208ENSMUST00000221370 Pkhd1l1Q80ZA4 4249 aa11.44□□□□□ -0.58
Trim9-208ENSMUST00000221370 Vps13bQ80TY5 3993 aa11.44□□□□□ -0.58
Trim9-208ENSMUST00000221370 Gm20537G3UYK7 97 aa11.4□□□□□ -0.58
Trim9-208ENSMUST00000221370 Gm5767A0A0J9YTU8 78 aa11.33□□□□□ -0.6
Trim9-208ENSMUST00000221370 Gm12216A0A1W2P827 62 aa11.23□□□□□ -0.61
Trim9-208ENSMUST00000221370 Gm3880A0A1B0GSB3 72 aa11.22□□□□□ -0.61
Trim9-208ENSMUST00000221370 Gm9955Q8CEJ8 102 aa11.17□□□□□ -0.62
Trim9-208ENSMUST00000221370 Ryr3A2AGL3 4863 aa11.16□□□□□ -0.62
Trim9-208ENSMUST00000221370 Lrp1Q91ZX7 4545 aaKnown RBP11.12□□□□□ -0.63
Trim9-208ENSMUST00000221370 Rnase13Q5GAM7 153 aa11.07□□□□□ -0.64
Trim9-208ENSMUST00000221370 Gm17606F6ZL36 78 aa11.06□□□□□ -0.64
Trim9-208ENSMUST00000221370 Gm10382Q3V0T5 144 aa11.03□□□□□ -0.64
Trim9-208ENSMUST00000221370 Rpl37Q9D823 97 aa11.01□□□□□ -0.65
Trim9-208ENSMUST00000221370 Krtap19-5O08632 62 aa11□□□□□ -0.65
Trim9-208ENSMUST00000221370 Fat3Q8BNA6 4555 aa10.92□□□□□ -0.66
Trim9-208ENSMUST00000221370 Kmt2cQ8BRH4 4903 aa10.92□□□□□ -0.66
Trim9-208ENSMUST00000221370 Gm17416Q30KP4 66 aa10.91□□□□□ -0.66
Trim9-208ENSMUST00000221370 Krtap15-1Q9QZU5 150 aa10.9□□□□□ -0.66
Trim9-208ENSMUST00000221370 Gm9736A0A1W2P7N1 277 aa10.86□□□□□ -0.67
Trim9-208ENSMUST00000221370 Gm5965D3Z724 196 aa10.86□□□□□ -0.67
Trim9-208ENSMUST00000221370 Krtap3-1A2A591 98 aa10.81□□□□□ -0.68
Trim9-208ENSMUST00000221370 Ryr2E9Q401 4966 aaKnown RBP10.81□□□□□ -0.68
Trim9-208ENSMUST00000221370 Romo1P60603 79 aa10.81□□□□□ -0.68
Trim9-208ENSMUST00000221370 Mycbp2Q7TPH6 4711 aa10.8□□□□□ -0.68
Trim9-208ENSMUST00000221370 CriptO70333 101 aa10.7□□□□□ -0.7
Trim9-208ENSMUST00000221370 2210017I01RikA0A0A6YVV1 95 aa10.67□□□□□ -0.7
Trim9-208ENSMUST00000221370 Dnah8Q91XQ0 4731 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 8 ms