Protein–RNA interactions for Protein: Q9JI18

Lrp1b, Low-density lipoprotein receptor-related protein 1B, mousemouse

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp1bQ9JI18 Gm25239-201ENSMUST00000174915 86 ntBASIC23.93■■□□□ 1.42
Lrp1bQ9JI18 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp1bQ9JI18 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lrp1bQ9JI18 Gm24109-201ENSMUST00000175489 103 ntBASIC20.97■□□□□ 0.95
Lrp1bQ9JI18 Gm15042-201ENSMUST00000120212 883 ntBASIC20.64■□□□□ 0.89
Lrp1bQ9JI18 Gm15045-201ENSMUST00000117359 883 ntBASIC20.36■□□□□ 0.85
Lrp1bQ9JI18 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrp1bQ9JI18 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrp1bQ9JI18 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrp1bQ9JI18 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lrp1bQ9JI18 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lrp1bQ9JI18 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrp1bQ9JI18 Gm23366-201ENSMUST00000175022 89 ntBASIC19.74■□□□□ 0.75
Lrp1bQ9JI18 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.58■□□□□ 0.73
Lrp1bQ9JI18 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.56■□□□□ 0.72
Lrp1bQ9JI18 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrp1bQ9JI18 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrp1bQ9JI18 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lrp1bQ9JI18 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrp1bQ9JI18 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Lrp1bQ9JI18 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lrp1bQ9JI18 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lrp1bQ9JI18 Gm25238-201ENSMUST00000174914 89 ntBASIC19.07■□□□□ 0.64
Lrp1bQ9JI18 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.06■□□□□ 0.64
Lrp1bQ9JI18 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrp1bQ9JI18 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrp1bQ9JI18 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrp1bQ9JI18 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrp1bQ9JI18 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.87■□□□□ 0.61
Lrp1bQ9JI18 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrp1bQ9JI18 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrp1bQ9JI18 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrp1bQ9JI18 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.69■□□□□ 0.58
Lrp1bQ9JI18 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrp1bQ9JI18 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Lrp1bQ9JI18 Psd-208ENSMUST00000224556 2034 ntBASIC18.54■□□□□ 0.56
Lrp1bQ9JI18 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrp1bQ9JI18 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrp1bQ9JI18 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Lrp1bQ9JI18 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrp1bQ9JI18 Gm25262-201ENSMUST00000174934 133 ntBASIC18.34■□□□□ 0.53
Lrp1bQ9JI18 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.26■□□□□ 0.51
Lrp1bQ9JI18 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.26■□□□□ 0.51
Lrp1bQ9JI18 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lrp1bQ9JI18 Gm27325-201ENSMUST00000175467 74 ntBASIC18.2■□□□□ 0.5
Lrp1bQ9JI18 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrp1bQ9JI18 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrp1bQ9JI18 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.11■□□□□ 0.49
Lrp1bQ9JI18 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrp1bQ9JI18 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrp1bQ9JI18 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrp1bQ9JI18 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.05■□□□□ 0.48
Lrp1bQ9JI18 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.03■□□□□ 0.48
Lrp1bQ9JI18 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.99■□□□□ 0.47
Lrp1bQ9JI18 Gm26115-201ENSMUST00000175605 87 ntBASIC17.98■□□□□ 0.47
Lrp1bQ9JI18 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.94■□□□□ 0.46
Lrp1bQ9JI18 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrp1bQ9JI18 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lrp1bQ9JI18 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Lrp1bQ9JI18 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.89■□□□□ 0.45
Lrp1bQ9JI18 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrp1bQ9JI18 Rab21-202ENSMUST00000218831 843 ntBASIC17.88■□□□□ 0.45
Lrp1bQ9JI18 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrp1bQ9JI18 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrp1bQ9JI18 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrp1bQ9JI18 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.79■□□□□ 0.44
Lrp1bQ9JI18 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.78■□□□□ 0.44
Lrp1bQ9JI18 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.77■□□□□ 0.43
Lrp1bQ9JI18 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrp1bQ9JI18 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrp1bQ9JI18 Gm8109-201ENSMUST00000194076 746 ntBASIC17.75■□□□□ 0.43
Lrp1bQ9JI18 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrp1bQ9JI18 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrp1bQ9JI18 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrp1bQ9JI18 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.6■□□□□ 0.41
Lrp1bQ9JI18 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.6■□□□□ 0.41
Lrp1bQ9JI18 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrp1bQ9JI18 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrp1bQ9JI18 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Lrp1bQ9JI18 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrp1bQ9JI18 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrp1bQ9JI18 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrp1bQ9JI18 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrp1bQ9JI18 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lrp1bQ9JI18 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrp1bQ9JI18 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrp1bQ9JI18 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.41■□□□□ 0.38
Lrp1bQ9JI18 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrp1bQ9JI18 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrp1bQ9JI18 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrp1bQ9JI18 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrp1bQ9JI18 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrp1bQ9JI18 Gm24804-201ENSMUST00000174982 85 ntBASIC17.38■□□□□ 0.37
Lrp1bQ9JI18 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrp1bQ9JI18 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrp1bQ9JI18 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lrp1bQ9JI18 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.32■□□□□ 0.36
Lrp1bQ9JI18 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrp1bQ9JI18 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.27■□□□□ 0.36
Lrp1bQ9JI18 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms