Protein–RNA interactions for Protein: Q9JI18

Lrp1b, Low-density lipoprotein receptor-related protein 1B, mousemouse

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp1bQ9JI18 Gm25239-201ENSMUST00000174915 86 ntBASIC23,93■■□□□ 1,42
Lrp1bQ9JI18 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22,17■■□□□ 1,14
Lrp1bQ9JI18 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Lrp1bQ9JI18 Gm24109-201ENSMUST00000175489 103 ntBASIC20,97■□□□□ 0,95
Lrp1bQ9JI18 Gm15042-201ENSMUST00000120212 883 ntBASIC20,64■□□□□ 0,89
Lrp1bQ9JI18 Gm15045-201ENSMUST00000117359 883 ntBASIC20,36■□□□□ 0,85
Lrp1bQ9JI18 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20,25■□□□□ 0,83
Lrp1bQ9JI18 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20,2■□□□□ 0,82
Lrp1bQ9JI18 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20,2■□□□□ 0,82
Lrp1bQ9JI18 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Lrp1bQ9JI18 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19,83■□□□□ 0,76
Lrp1bQ9JI18 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Lrp1bQ9JI18 Gm23366-201ENSMUST00000175022 89 ntBASIC19,74■□□□□ 0,75
Lrp1bQ9JI18 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19,58■□□□□ 0,73
Lrp1bQ9JI18 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19,56■□□□□ 0,72
Lrp1bQ9JI18 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Lrp1bQ9JI18 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Lrp1bQ9JI18 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19,36■□□□□ 0,69
Lrp1bQ9JI18 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19,35■□□□□ 0,69
Lrp1bQ9JI18 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19,35■□□□□ 0,69
Lrp1bQ9JI18 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19,14■□□□□ 0,65
Lrp1bQ9JI18 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,65
Lrp1bQ9JI18 Gm25238-201ENSMUST00000174914 89 ntBASIC19,07■□□□□ 0,64
Lrp1bQ9JI18 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19,06■□□□□ 0,64
Lrp1bQ9JI18 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19,04■□□□□ 0,64
Lrp1bQ9JI18 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18,98■□□□□ 0,63
Lrp1bQ9JI18 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Lrp1bQ9JI18 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18,9■□□□□ 0,62
Lrp1bQ9JI18 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18,87■□□□□ 0,61
Lrp1bQ9JI18 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18,84■□□□□ 0,61
Lrp1bQ9JI18 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18,8■□□□□ 0,6
Lrp1bQ9JI18 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Lrp1bQ9JI18 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18,69■□□□□ 0,58
Lrp1bQ9JI18 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18,63■□□□□ 0,57
Lrp1bQ9JI18 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18,59■□□□□ 0,57
Lrp1bQ9JI18 Psd-208ENSMUST00000224556 2034 ntBASIC18,54■□□□□ 0,56
Lrp1bQ9JI18 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,56
Lrp1bQ9JI18 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18,52■□□□□ 0,55
Lrp1bQ9JI18 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18,47■□□□□ 0,55
Lrp1bQ9JI18 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18,47■□□□□ 0,55
Lrp1bQ9JI18 Gm25262-201ENSMUST00000174934 133 ntBASIC18,34■□□□□ 0,53
Lrp1bQ9JI18 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18,26■□□□□ 0,51
Lrp1bQ9JI18 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18,26■□□□□ 0,51
Lrp1bQ9JI18 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18,23■□□□□ 0,51
Lrp1bQ9JI18 Gm27325-201ENSMUST00000175467 74 ntBASIC18,2■□□□□ 0,5
Lrp1bQ9JI18 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18,16■□□□□ 0,5
Lrp1bQ9JI18 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Lrp1bQ9JI18 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18,11■□□□□ 0,49
Lrp1bQ9JI18 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,48
Lrp1bQ9JI18 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,05■□□□□ 0,48
Lrp1bQ9JI18 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,05■□□□□ 0,48
Lrp1bQ9JI18 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18,05■□□□□ 0,48
Lrp1bQ9JI18 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18,03■□□□□ 0,48
Lrp1bQ9JI18 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17,99■□□□□ 0,47
Lrp1bQ9JI18 Gm26115-201ENSMUST00000175605 87 ntBASIC17,98■□□□□ 0,47
Lrp1bQ9JI18 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17,94■□□□□ 0,46
Lrp1bQ9JI18 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17,94■□□□□ 0,46
Lrp1bQ9JI18 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17,93■□□□□ 0,46
Lrp1bQ9JI18 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17,91■□□□□ 0,46
Lrp1bQ9JI18 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17,89■□□□□ 0,45
Lrp1bQ9JI18 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17,89■□□□□ 0,45
Lrp1bQ9JI18 Rab21-202ENSMUST00000218831 843 ntBASIC17,88■□□□□ 0,45
Lrp1bQ9JI18 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17,87■□□□□ 0,45
Lrp1bQ9JI18 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17,85■□□□□ 0,45
Lrp1bQ9JI18 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17,8■□□□□ 0,44
Lrp1bQ9JI18 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17,79■□□□□ 0,44
Lrp1bQ9JI18 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17,78■□□□□ 0,44
Lrp1bQ9JI18 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17,77■□□□□ 0,43
Lrp1bQ9JI18 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17,76■□□□□ 0,43
Lrp1bQ9JI18 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17,75■□□□□ 0,43
Lrp1bQ9JI18 Gm8109-201ENSMUST00000194076 746 ntBASIC17,75■□□□□ 0,43
Lrp1bQ9JI18 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17,69■□□□□ 0,42
Lrp1bQ9JI18 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17,69■□□□□ 0,42
Lrp1bQ9JI18 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17,67■□□□□ 0,42
Lrp1bQ9JI18 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17,6■□□□□ 0,41
Lrp1bQ9JI18 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17,6■□□□□ 0,41
Lrp1bQ9JI18 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17,59■□□□□ 0,41
Lrp1bQ9JI18 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17,58■□□□□ 0,4
Lrp1bQ9JI18 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17,56■□□□□ 0,4
Lrp1bQ9JI18 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17,53■□□□□ 0,4
Lrp1bQ9JI18 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17,52■□□□□ 0,4
Lrp1bQ9JI18 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17,47■□□□□ 0,39
Lrp1bQ9JI18 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17,47■□□□□ 0,39
Lrp1bQ9JI18 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17,45■□□□□ 0,38
Lrp1bQ9JI18 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17,43■□□□□ 0,38
Lrp1bQ9JI18 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17,42■□□□□ 0,38
Lrp1bQ9JI18 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17,41■□□□□ 0,38
Lrp1bQ9JI18 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17,39■□□□□ 0,37
Lrp1bQ9JI18 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17,39■□□□□ 0,37
Lrp1bQ9JI18 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17,39■□□□□ 0,37
Lrp1bQ9JI18 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17,39■□□□□ 0,37
Lrp1bQ9JI18 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17,38■□□□□ 0,37
Lrp1bQ9JI18 Gm24804-201ENSMUST00000174982 85 ntBASIC17,38■□□□□ 0,37
Lrp1bQ9JI18 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17,34■□□□□ 0,37
Lrp1bQ9JI18 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17,33■□□□□ 0,37
Lrp1bQ9JI18 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17,33■□□□□ 0,36
Lrp1bQ9JI18 Gm17082-201ENSMUST00000166043 1091 ntBASIC17,32■□□□□ 0,36
Lrp1bQ9JI18 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17,29■□□□□ 0,36
Lrp1bQ9JI18 Gm42596-201ENSMUST00000196305 1958 ntBASIC17,27■□□□□ 0,36
Lrp1bQ9JI18 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17,27■□□□□ 0,36
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms