Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm25239-201ENSMUST00000174915 86 ntBASIC26,37■■□□□ 1,81
Pkd1O08852 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,4■■□□□ 1,5
Pkd1O08852 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Pkd1O08852 Gm24109-201ENSMUST00000175489 103 ntBASIC23,06■■□□□ 1,28
Pkd1O08852 Gm15042-201ENSMUST00000120212 883 ntBASIC22,6■■□□□ 1,21
Pkd1O08852 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,33■■□□□ 1,17
Pkd1O08852 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Pkd1O08852 Gm15045-201ENSMUST00000117359 883 ntBASIC22,21■■□□□ 1,15
Pkd1O08852 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,91■■□□□ 1,1
Pkd1O08852 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Pkd1O08852 Gm23366-201ENSMUST00000175022 89 ntBASIC21,79■■□□□ 1,08
Pkd1O08852 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,52■■□□□ 1,04
Pkd1O08852 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,52■■□□□ 1,04
Pkd1O08852 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Pkd1O08852 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,29■■□□□ 1
Pkd1O08852 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Pkd1O08852 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Pkd1O08852 Gm25238-201ENSMUST00000174914 89 ntBASIC20,98■□□□□ 0,95
Pkd1O08852 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20,97■□□□□ 0,95
Pkd1O08852 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20,9■□□□□ 0,94
Pkd1O08852 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20,84■□□□□ 0,93
Pkd1O08852 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Pkd1O08852 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20,57■□□□□ 0,88
Pkd1O08852 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20,51■□□□□ 0,87
Pkd1O08852 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20,39■□□□□ 0,85
Pkd1O08852 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20,36■□□□□ 0,85
Pkd1O08852 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20,34■□□□□ 0,85
Pkd1O08852 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20,33■□□□□ 0,84
Pkd1O08852 Gm25262-201ENSMUST00000174934 133 ntBASIC20,17■□□□□ 0,82
Pkd1O08852 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20,16■□□□□ 0,82
Pkd1O08852 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20,15■□□□□ 0,82
Pkd1O08852 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20,07■□□□□ 0,8
Pkd1O08852 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20,07■□□□□ 0,8
Pkd1O08852 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20,06■□□□□ 0,8
Pkd1O08852 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20,04■□□□□ 0,8
Pkd1O08852 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0,79
Pkd1O08852 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19,94■□□□□ 0,78
Pkd1O08852 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Pkd1O08852 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19,88■□□□□ 0,77
Pkd1O08852 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19,85■□□□□ 0,77
Pkd1O08852 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19,85■□□□□ 0,77
Pkd1O08852 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19,84■□□□□ 0,77
Pkd1O08852 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,77
Pkd1O08852 Gm27325-201ENSMUST00000175467 74 ntBASIC19,83■□□□□ 0,76
Pkd1O08852 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19,81■□□□□ 0,76
Pkd1O08852 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19,8■□□□□ 0,76
Pkd1O08852 Gm26115-201ENSMUST00000175605 87 ntBASIC19,79■□□□□ 0,76
Pkd1O08852 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Pkd1O08852 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19,73■□□□□ 0,75
Pkd1O08852 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Pkd1O08852 Rab21-202ENSMUST00000218831 843 ntBASIC19,65■□□□□ 0,74
Pkd1O08852 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19,61■□□□□ 0,73
Pkd1O08852 Gm8109-201ENSMUST00000194076 746 ntBASIC19,61■□□□□ 0,73
Pkd1O08852 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19,56■□□□□ 0,72
Pkd1O08852 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19,52■□□□□ 0,72
Pkd1O08852 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19,5■□□□□ 0,71
Pkd1O08852 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19,49■□□□□ 0,71
Pkd1O08852 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19,45■□□□□ 0,7
Pkd1O08852 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19,4■□□□□ 0,7
Pkd1O08852 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19,39■□□□□ 0,69
Pkd1O08852 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19,35■□□□□ 0,69
Pkd1O08852 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19,32■□□□□ 0,68
Pkd1O08852 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Pkd1O08852 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19,26■□□□□ 0,67
Pkd1O08852 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Pkd1O08852 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,2■□□□□ 0,66
Pkd1O08852 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19,15■□□□□ 0,66
Pkd1O08852 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19,13■□□□□ 0,65
Pkd1O08852 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19,11■□□□□ 0,65
Pkd1O08852 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Pkd1O08852 Gm17082-201ENSMUST00000166043 1091 ntBASIC19,1■□□□□ 0,65
Pkd1O08852 Gm24804-201ENSMUST00000174982 85 ntBASIC19,1■□□□□ 0,65
Pkd1O08852 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Pkd1O08852 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19,06■□□□□ 0,64
Pkd1O08852 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19,03■□□□□ 0,64
Pkd1O08852 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18,95■□□□□ 0,62
Pkd1O08852 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18,93■□□□□ 0,62
Pkd1O08852 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18,92■□□□□ 0,62
Pkd1O08852 Psd-208ENSMUST00000224556 2034 ntBASIC18,83■□□□□ 0,61
Pkd1O08852 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18,83■□□□□ 0,61
Pkd1O08852 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18,83■□□□□ 0,6
Pkd1O08852 Gm27322-201ENSMUST00000184007 104 ntBASIC18,82■□□□□ 0,6
Pkd1O08852 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18,82■□□□□ 0,6
Pkd1O08852 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,82■□□□□ 0,6
Pkd1O08852 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18,8■□□□□ 0,6
Pkd1O08852 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18,8■□□□□ 0,6
Pkd1O08852 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18,8■□□□□ 0,6
Pkd1O08852 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18,79■□□□□ 0,6
Pkd1O08852 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18,78■□□□□ 0,6
Pkd1O08852 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18,78■□□□□ 0,6
Pkd1O08852 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18,76■□□□□ 0,59
Pkd1O08852 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18,75■□□□□ 0,59
Pkd1O08852 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18,74■□□□□ 0,59
Pkd1O08852 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18,73■□□□□ 0,59
Pkd1O08852 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,72■□□□□ 0,59
Pkd1O08852 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Pkd1O08852 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Pkd1O08852 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Pkd1O08852 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18,69■□□□□ 0,58
Pkd1O08852 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18,67■□□□□ 0,58
Retrieved 100 of 76,532 protein–RNA pairs in 9,9 ms