Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Gm25239-201ENSMUST00000174915 86 ntBASIC24.84■■□□□ 1.57
Vps13bQ80TY5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vps13bQ80TY5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vps13bQ80TY5 Gm24109-201ENSMUST00000175489 103 ntBASIC21.86■■□□□ 1.09
Vps13bQ80TY5 Gm15042-201ENSMUST00000120212 883 ntBASIC21.26■□□□□ 0.99
Vps13bQ80TY5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps13bQ80TY5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps13bQ80TY5 Gm15045-201ENSMUST00000117359 883 ntBASIC20.95■□□□□ 0.94
Vps13bQ80TY5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps13bQ80TY5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13bQ80TY5 Gm23366-201ENSMUST00000175022 89 ntBASIC20.54■□□□□ 0.88
Vps13bQ80TY5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.32■□□□□ 0.84
Vps13bQ80TY5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.27■□□□□ 0.83
Vps13bQ80TY5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13bQ80TY5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Vps13bQ80TY5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13bQ80TY5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps13bQ80TY5 Gm25238-201ENSMUST00000174914 89 ntBASIC19.77■□□□□ 0.76
Vps13bQ80TY5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps13bQ80TY5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.69■□□□□ 0.74
Vps13bQ80TY5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vps13bQ80TY5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps13bQ80TY5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13bQ80TY5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Vps13bQ80TY5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps13bQ80TY5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Vps13bQ80TY5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps13bQ80TY5 Gm25262-201ENSMUST00000174934 133 ntBASIC19.11■□□□□ 0.65
Vps13bQ80TY5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps13bQ80TY5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps13bQ80TY5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps13bQ80TY5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.94■□□□□ 0.62
Vps13bQ80TY5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13bQ80TY5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.9■□□□□ 0.62
Vps13bQ80TY5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13bQ80TY5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.81■□□□□ 0.6
Vps13bQ80TY5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13bQ80TY5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps13bQ80TY5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13bQ80TY5 Gm26115-201ENSMUST00000175605 87 ntBASIC18.7■□□□□ 0.58
Vps13bQ80TY5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.7■□□□□ 0.58
Vps13bQ80TY5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Vps13bQ80TY5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.69■□□□□ 0.58
Vps13bQ80TY5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps13bQ80TY5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps13bQ80TY5 Gm27325-201ENSMUST00000175467 74 ntBASIC18.64■□□□□ 0.57
Vps13bQ80TY5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps13bQ80TY5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vps13bQ80TY5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps13bQ80TY5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13bQ80TY5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps13bQ80TY5 Gm8109-201ENSMUST00000194076 746 ntBASIC18.52■□□□□ 0.56
Vps13bQ80TY5 Rab21-202ENSMUST00000218831 843 ntBASIC18.49■□□□□ 0.55
Vps13bQ80TY5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13bQ80TY5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.36■□□□□ 0.53
Vps13bQ80TY5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps13bQ80TY5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps13bQ80TY5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps13bQ80TY5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13bQ80TY5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps13bQ80TY5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13bQ80TY5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps13bQ80TY5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps13bQ80TY5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps13bQ80TY5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps13bQ80TY5 Gm24804-201ENSMUST00000174982 85 ntBASIC18.06■□□□□ 0.48
Vps13bQ80TY5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps13bQ80TY5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps13bQ80TY5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps13bQ80TY5 Gm17082-201ENSMUST00000166043 1091 ntBASIC18■□□□□ 0.47
Vps13bQ80TY5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13bQ80TY5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13bQ80TY5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps13bQ80TY5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps13bQ80TY5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps13bQ80TY5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps13bQ80TY5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps13bQ80TY5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps13bQ80TY5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps13bQ80TY5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps13bQ80TY5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.79■□□□□ 0.44
Vps13bQ80TY5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.78■□□□□ 0.44
Vps13bQ80TY5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.77■□□□□ 0.44
Vps13bQ80TY5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps13bQ80TY5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.73■□□□□ 0.43
Vps13bQ80TY5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps13bQ80TY5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps13bQ80TY5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps13bQ80TY5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps13bQ80TY5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Vps13bQ80TY5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps13bQ80TY5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.67■□□□□ 0.42
Vps13bQ80TY5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps13bQ80TY5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.66■□□□□ 0.42
Vps13bQ80TY5 Gm27322-201ENSMUST00000184007 104 ntBASIC17.66■□□□□ 0.42
Vps13bQ80TY5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.66■□□□□ 0.42
Vps13bQ80TY5 Psd-208ENSMUST00000224556 2034 ntBASIC17.61■□□□□ 0.41
Vps13bQ80TY5 Zfp131-205ENSMUST00000223812 663 ntBASIC17.61■□□□□ 0.41
Vps13bQ80TY5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vps13bQ80TY5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms