RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Defb12Q8K4N3 78 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 4930535I16RikQ9CUI2 172 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 HrnrQ8VHD8 2496 aa7.28□□□□□ -1.24
Trim50-202ENSMUST00000111180 Gm16253D3Z167 63 aa7.27□□□□□ -1.25
Trim50-202ENSMUST00000111180 Ush2AQ2QI47 5193 aa7.27□□□□□ -1.25
Trim50-202ENSMUST00000111180 C130032M10RikQ8C888 123 aa7.26□□□□□ -1.25
Trim50-202ENSMUST00000111180 Gm21886J3QJU9 214 aa7.25□□□□□ -1.25
Trim50-202ENSMUST00000111180 4932415D10RikA0A1W2P6U8 4986 aa7.25□□□□□ -1.25
Trim50-202ENSMUST00000111180 Gm9736A0A1W2P7N1 277 aa7.24□□□□□ -1.25
Trim50-202ENSMUST00000111180 A930033H14RikG5E8X6 103 aa7.24□□□□□ -1.25
Trim50-202ENSMUST00000111180 Gm17689B3GLJ4 109 aa7.21□□□□□ -1.26
Trim50-202ENSMUST00000111180 Spaca4Q80ZQ0 127 aa7.21□□□□□ -1.26
Trim50-202ENSMUST00000111180 Gm9789Q8BIG3 52 aa7.21□□□□□ -1.26
Trim50-202ENSMUST00000111180 Atp5eP56382 52 aa7.2□□□□□ -1.26
Trim50-202ENSMUST00000111180 Dph3Q8K0W9 82 aa7.19□□□□□ -1.26
Trim50-202ENSMUST00000111180 Hist1h4aP62806 103 aaKnown RBP7.17□□□□□ -1.26
Trim50-202ENSMUST00000111180 Reg3aO09037 175 aa7.16□□□□□ -1.26
Trim50-202ENSMUST00000111180 Rps29P62274 56 aa7.16□□□□□ -1.26
Trim50-202ENSMUST00000111180 Igkv8-19A0A0G2JFN8 121 aa7.15□□□□□ -1.27
Trim50-202ENSMUST00000111180 Gm2310J3QNJ2 377 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 GhrhP16043 103 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 Hmcn2A2AJ76 5100 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 Ubr4A2AN08 5180 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 Defa21Q8C1P2 93 aa7.11□□□□□ -1.27
Trim50-202ENSMUST00000111180 Prr15lQ8JZM2 100 aa7.09□□□□□ -1.27
Trim50-202ENSMUST00000111180 Ndufc1Q9CQY9 76 aa7.08□□□□□ -1.28
Trim50-202ENSMUST00000111180 Anapc13Q8R034 74 aa7.07□□□□□ -1.28
Trim50-202ENSMUST00000111180 Igkv3-3A0A140T8Q0 119 aa7.06□□□□□ -1.28
Trim50-202ENSMUST00000111180 Cypt15B1AXS0 87 aa7.05□□□□□ -1.28
Trim50-202ENSMUST00000111180 Cystm1Q8K353 104 aa7.02□□□□□ -1.29
Trim50-202ENSMUST00000111180 Samd13D3YUG0 102 aa7.01□□□□□ -1.29
Trim50-202ENSMUST00000111180 A0A286YE49 62 aa7□□□□□ -1.29
Trim50-202ENSMUST00000111180 BikO70337 150 aa6.98□□□□□ -1.29
Trim50-202ENSMUST00000111180 Fam229bQ8CF36 80 aa6.97□□□□□ -1.29
Trim50-202ENSMUST00000111180 Spink8Q09TK9 105 aa6.96□□□□□ -1.3
Trim50-202ENSMUST00000111180 Naa38Q9D2U5 125 aa6.94□□□□□ -1.3
Trim50-202ENSMUST00000111180 4930518I15RikQ3V2W7 57 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 7530416G11RikJ3QJX6 159 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 Serp2Q6TAW2 65 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 Gm26620Q9CY65 116 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 Gm5965D3Z724 196 aa6.91□□□□□ -1.3
Trim50-202ENSMUST00000111180 Defb13Q8R2I4 64 aa6.91□□□□□ -1.3
Trim50-202ENSMUST00000111180 Scgb1b2O35176 93 aa6.88□□□□□ -1.31
Trim50-202ENSMUST00000111180 Gm10267M0QWD8 85 aa6.86□□□□□ -1.31
Trim50-202ENSMUST00000111180 1700074P13RikQ9D9G7 251 aa6.86□□□□□ -1.31
Trim50-202ENSMUST00000111180 Gm11939A2A592 99 aa6.85□□□□□ -1.31
Trim50-202ENSMUST00000111180 Gm5767A0A0J9YTU8 78 aa6.84□□□□□ -1.31
Trim50-202ENSMUST00000111180 B230307C23RikQ8BLB2 64 aa6.8□□□□□ -1.32
Trim50-202ENSMUST00000111180 Atox1O08997 68 aaKnown RBP6.79□□□□□ -1.32
Trim50-202ENSMUST00000111180 Krtap17-1A2A5X6 109 aa6.76□□□□□ -1.33
Trim50-202ENSMUST00000111180 Apoc4Q61268 124 aa6.75□□□□□ -1.33
Trim50-202ENSMUST00000111180 Coa6Q8BGD8 79 aa6.75□□□□□ -1.33
Trim50-202ENSMUST00000111180 Spint4Q9D263 159 aa6.73□□□□□ -1.33
Trim50-202ENSMUST00000111180 Krtap1-3A2A588 173 aa6.7□□□□□ -1.34
Trim50-202ENSMUST00000111180 Gm9821Q8K076 103 aa6.7□□□□□ -1.34
Trim50-202ENSMUST00000111180 ZanO88799 5376 aa6.68□□□□□ -1.34
Trim50-202ENSMUST00000111180 Prr13Q9CQJ5 137 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 Krtap3-2Q9D638 99 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 2310057N15RikQ9D6T8 200 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 Krtap3-3Q9D7P0 99 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 Rpl37Q9D823 97 aa6.66□□□□□ -1.34
Trim50-202ENSMUST00000111180 Smlr1J3QMJ4 66 aa6.65□□□□□ -1.35
Trim50-202ENSMUST00000111180 Krtap15-1Q9QZU5 150 aa6.65□□□□□ -1.35
Trim50-202ENSMUST00000111180 Fat4Q2PZL6 4981 aa6.63□□□□□ -1.35
Trim50-202ENSMUST00000111180 Chtf8P0CG14 533 aa6.63□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm28539A0A087WSL9 92 aa6.62□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm10160F6Y577 67 aa6.61□□□□□ -1.35
Trim50-202ENSMUST00000111180 Tmem258P61166 79 aa6.61□□□□□ -1.35
Trim50-202ENSMUST00000111180 Crct1Q6PAI5 102 aa6.61□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm4491E0CX42 125 aa6.6□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm10999F6Q4M4 69 aa6.59□□□□□ -1.36
Trim50-202ENSMUST00000111180 Sec61bQ9CQS8 96 aaKnown RBP6.59□□□□□ -1.36
Trim50-202ENSMUST00000111180 Q8BGJ3 129 aa6.58□□□□□ -1.36
Trim50-202ENSMUST00000111180 LorP18165 486 aa6.57□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm10643Q3URG9 111 aa6.56□□□□□ -1.36
Trim50-202ENSMUST00000111180 Rnase13Q5GAM7 153 aa6.56□□□□□ -1.36
Trim50-202ENSMUST00000111180 Defb38Q7TNV7 63 aa6.56□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm19402J3QJV4 266 aa6.55□□□□□ -1.36
Trim50-202ENSMUST00000111180 Coa5Q99M07 74 aa6.55□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm19935A0A1B0GSF9 52 aa6.54□□□□□ -1.36
Trim50-202ENSMUST00000111180 Pet100P0DJE0 76 aa6.53□□□□□ -1.36
Trim50-202ENSMUST00000111180 9230102O04RikA2ASX7 82 aa6.53□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm11562A0PK51 136 aa6.52□□□□□ -1.37
Trim50-202ENSMUST00000111180 Gm21798J3QNU5 87 aa6.52□□□□□ -1.37
Trim50-202ENSMUST00000111180 4930507D05RikQ8C9C9 103 aa6.51□□□□□ -1.37
Trim50-202ENSMUST00000111180 2310034C09RikQ9D746 214 aa6.51□□□□□ -1.37
Trim50-202ENSMUST00000111180 SnurfQ9WU12 71 aa6.47□□□□□ -1.37
Trim50-202ENSMUST00000111180 2310079G19RikQ9D6L6 185 aa6.46□□□□□ -1.38
Trim50-202ENSMUST00000111180 SmcpP15265 143 aa6.43□□□□□ -1.38
Trim50-202ENSMUST00000111180 Rnf213E9Q555 5152 aaKnown RBP6.42□□□□□ -1.38
Trim50-202ENSMUST00000111180 Gm17416Q30KP4 66 aa6.41□□□□□ -1.38
Trim50-202ENSMUST00000111180 Cdc42se1Q8BHL7 80 aa6.41□□□□□ -1.38
Trim50-202ENSMUST00000111180 Gm10061D3Z714 54 aa6.4□□□□□ -1.39
Trim50-202ENSMUST00000111180 Serp1Q9Z1W5 66 aa6.38□□□□□ -1.39
Trim50-202ENSMUST00000111180 Gm10318A0A1W2P728 225 aa6.37□□□□□ -1.39
Trim50-202ENSMUST00000111180 Smim20D3Z7Q2 69 aa6.36□□□□□ -1.39
Trim50-202ENSMUST00000111180 SptssbQ925E8 76 aa6.34□□□□□ -1.4
Trim50-202ENSMUST00000111180 Krtap4-2B1AQ85 167 aa6.33□□□□□ -1.4
Trim50-202ENSMUST00000111180 Rps28P62858 69 aaKnown RBP6.33□□□□□ -1.4
Trim50-202ENSMUST00000111180 Brk1Q91VR8 75 aa6.33□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 184.2 ms