RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Prr15lQ8JZM2 100 aa11.06□□□□□ -0.64
Sqstm1-202ENSMUST00000102774 Defa21Q8C1P2 93 aa11.04□□□□□ -0.64
Sqstm1-202ENSMUST00000102774 Herc2Q4U2R1 4836 aa11□□□□□ -0.65
Sqstm1-202ENSMUST00000102774 Fam229bQ8CF36 80 aa10.99□□□□□ -0.65
Sqstm1-202ENSMUST00000102774 Gm2310J3QNJ2 377 aa10.98□□□□□ -0.65
Sqstm1-202ENSMUST00000102774 Birc6O88738 4882 aa10.97□□□□□ -0.65
Sqstm1-202ENSMUST00000102774 Dnhd1D3Z2X2 4750 aa10.93□□□□□ -0.66
Sqstm1-202ENSMUST00000102774 Ndufc1Q9CQY9 76 aa10.92□□□□□ -0.66
Sqstm1-202ENSMUST00000102774 D6Ertd527eA0A0N4SWI3 464 aa10.91□□□□□ -0.66
Sqstm1-202ENSMUST00000102774 Cypt15B1AXS0 87 aa10.91□□□□□ -0.66
Sqstm1-202ENSMUST00000102774 Kiaa1109A2AAE1 5005 aa10.91□□□□□ -0.66
Sqstm1-202ENSMUST00000102774 Rps29P62274 56 aa10.91□□□□□ -0.66
Sqstm1-202ENSMUST00000102774 Igkv3-3A0A140T8Q0 119 aa10.89□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 Spink8Q09TK9 105 aa10.89□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 Samd13D3YUG0 102 aa10.87□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 A530084C06RikQ3UTW2 186 aa10.86□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 7530416G11RikJ3QJX6 159 aa10.85□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 A0A286YE49 62 aa10.85□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 Naa38Q9D2U5 125 aa10.85□□□□□ -0.67
Sqstm1-202ENSMUST00000102774 Gm9736A0A1W2P7N1 277 aa10.82□□□□□ -0.68
Sqstm1-202ENSMUST00000102774 4930518I15RikQ3V2W7 57 aa10.82□□□□□ -0.68
Sqstm1-202ENSMUST00000102774 Mycbp2Q7TPH6 4711 aa10.78□□□□□ -0.68
Sqstm1-202ENSMUST00000102774 Serp2Q6TAW2 65 aa10.77□□□□□ -0.69
Sqstm1-202ENSMUST00000102774 BikO70337 150 aa10.74□□□□□ -0.69
Sqstm1-202ENSMUST00000102774 Defb13Q8R2I4 64 aa10.72□□□□□ -0.69
Sqstm1-202ENSMUST00000102774 Gm10267M0QWD8 85 aa10.72□□□□□ -0.69
Sqstm1-202ENSMUST00000102774 HydinQ80W93 5154 aa10.71□□□□□ -0.69
Sqstm1-202ENSMUST00000102774 1700074P13RikQ9D9G7 251 aa10.68□□□□□ -0.7
Sqstm1-202ENSMUST00000102774 Gm11939A2A592 99 aa10.65□□□□□ -0.71
Sqstm1-202ENSMUST00000102774 Gm26620Q9CY65 116 aa10.65□□□□□ -0.71
Sqstm1-202ENSMUST00000102774 B230307C23RikQ8BLB2 64 aa10.64□□□□□ -0.71
Sqstm1-202ENSMUST00000102774 GhrhP16043 103 aa10.63□□□□□ -0.71
Sqstm1-202ENSMUST00000102774 Apoc4Q61268 124 aa10.61□□□□□ -0.71
Sqstm1-202ENSMUST00000102774 Prr13Q9CQJ5 137 aa10.56□□□□□ -0.72
Sqstm1-202ENSMUST00000102774 Gm5965D3Z724 196 aa10.55□□□□□ -0.72
Sqstm1-202ENSMUST00000102774 PcloQ9QYX7 5068 aa10.53□□□□□ -0.72
Sqstm1-202ENSMUST00000102774 Gm5767A0A0J9YTU8 78 aa10.51□□□□□ -0.73
Sqstm1-202ENSMUST00000102774 Scgb1b2O35176 93 aa10.51□□□□□ -0.73
Sqstm1-202ENSMUST00000102774 Atox1O08997 68 aaKnown RBP10.5□□□□□ -0.73
Sqstm1-202ENSMUST00000102774 Coa6Q8BGD8 79 aa10.47□□□□□ -0.73
Sqstm1-202ENSMUST00000102774 Spint4Q9D263 159 aa10.45□□□□□ -0.74
Sqstm1-202ENSMUST00000102774 Lrp2A2ARV4 4660 aa10.42□□□□□ -0.74
Sqstm1-202ENSMUST00000102774 Krtap3-2Q9D638 99 aa10.4□□□□□ -0.75
Sqstm1-202ENSMUST00000102774 Krtap3-3Q9D7P0 99 aa10.4□□□□□ -0.75
Sqstm1-202ENSMUST00000102774 Chtf8P0CG14 533 aa10.38□□□□□ -0.75
Sqstm1-202ENSMUST00000102774 Lce1mQ9CR91 182 aa10.38□□□□□ -0.75
Sqstm1-202ENSMUST00000102774 Gm28539A0A087WSL9 92 aa10.35□□□□□ -0.75
Sqstm1-202ENSMUST00000102774 Defb38Q7TNV7 63 aa10.35□□□□□ -0.75
Sqstm1-202ENSMUST00000102774 Krtap15-1Q9QZU5 150 aa10.32□□□□□ -0.76
Sqstm1-202ENSMUST00000102774 Gm10160F6Y577 67 aa10.28□□□□□ -0.76
Sqstm1-202ENSMUST00000102774 Tmem258P61166 79 aa10.26□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Gm9821Q8K076 103 aa10.25□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Gm10999F6Q4M4 69 aa10.24□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Smlr1J3QMJ4 66 aa10.24□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Rpl37Q9D823 97 aa10.24□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Gm4491E0CX42 125 aa10.23□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Q8BGJ3 129 aa10.22□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Coa5Q99M07 74 aa10.22□□□□□ -0.77
Sqstm1-202ENSMUST00000102774 Gm21798J3QNU5 87 aa10.19□□□□□ -0.78
Sqstm1-202ENSMUST00000102774 SnurfQ9WU12 71 aa10.18□□□□□ -0.78
Sqstm1-202ENSMUST00000102774 Herc1E9PZP8 4859 aa10.18□□□□□ -0.78
Sqstm1-202ENSMUST00000102774 A930033H14RikG5E8X6 103 aa10.17□□□□□ -0.78
Sqstm1-202ENSMUST00000102774 Gm19935A0A1B0GSF9 52 aa10.17□□□□□ -0.78
Sqstm1-202ENSMUST00000102774 Pet100P0DJE0 76 aa10.15□□□□□ -0.78
Sqstm1-202ENSMUST00000102774 SmcpP15265 143 aa10.14□□□□□ -0.79
Sqstm1-202ENSMUST00000102774 2310034C09RikQ9D746 214 aa10.11□□□□□ -0.79
Sqstm1-202ENSMUST00000102774 Rnase13Q5GAM7 153 aa10.1□□□□□ -0.79
Sqstm1-202ENSMUST00000102774 Gm10643Q3URG9 111 aa10.07□□□□□ -0.8
Sqstm1-202ENSMUST00000102774 2310079G19RikQ9D6L6 185 aa10.04□□□□□ -0.8
Sqstm1-202ENSMUST00000102774 4930507D05RikQ8C9C9 103 aa10.02□□□□□ -0.81
Sqstm1-202ENSMUST00000102774 Smim20D3Z7Q2 69 aa10□□□□□ -0.81
Sqstm1-202ENSMUST00000102774 Cdc42se1Q8BHL7 80 aa9.96□□□□□ -0.81
Sqstm1-202ENSMUST00000102774 Gm18596A0A1W2P860 280 aa9.95□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 Brk1Q91VR8 75 aa9.94□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 Serp1Q9Z1W5 66 aa9.94□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 Sec61bQ9CQS8 96 aaKnown RBP9.93□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 9230102O04RikA2ASX7 82 aa9.92□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 2310057N15RikQ9D6T8 200 aa9.91□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 Pcp4P63054 62 aa9.9□□□□□ -0.82
Sqstm1-202ENSMUST00000102774 Rps28P62858 69 aaKnown RBP9.88□□□□□ -0.83
Sqstm1-202ENSMUST00000102774 Gm17416Q30KP4 66 aa9.85□□□□□ -0.83
Sqstm1-202ENSMUST00000102774 Gm10197F6QEY5 67 aa9.84□□□□□ -0.83
Sqstm1-202ENSMUST00000102774 Defb1P56386 69 aa9.84□□□□□ -0.83
Sqstm1-202ENSMUST00000102774 Ush2AQ2QI47 5193 aa9.8□□□□□ -0.84
Sqstm1-202ENSMUST00000102774 Gm20661K7N787 53 aa9.8□□□□□ -0.84
Sqstm1-202ENSMUST00000102774 SptssbQ925E8 76 aa9.73□□□□□ -0.85
Sqstm1-202ENSMUST00000102774 Phxr4P15974 95 aa9.72□□□□□ -0.85
Sqstm1-202ENSMUST00000102774 H2al1aQ5M8Q2 105 aa9.72□□□□□ -0.85
Sqstm1-202ENSMUST00000102774 H2al1eQ810S6 105 aa9.72□□□□□ -0.85
Sqstm1-202ENSMUST00000102774 Hmcn2A2AJ76 5100 aa9.69□□□□□ -0.86
Sqstm1-202ENSMUST00000102774 Prm1P02319 51 aa9.66□□□□□ -0.86
Sqstm1-202ENSMUST00000102774 Gm9789Q8BIG3 52 aa9.66□□□□□ -0.86
Sqstm1-202ENSMUST00000102774 Gm7735D3YX18 52 aa9.6□□□□□ -0.87
Sqstm1-202ENSMUST00000102774 Cox6b2Q80ZN9 88 aa9.6□□□□□ -0.87
Sqstm1-202ENSMUST00000102774 SvipQ3UZP4 77 aa9.6□□□□□ -0.87
Sqstm1-202ENSMUST00000102774 Crct1Q6PAI5 102 aa9.59□□□□□ -0.87
Sqstm1-202ENSMUST00000102774 H2al1bA0A087WP11 105 aa9.58□□□□□ -0.88
Sqstm1-202ENSMUST00000102774 2210017I01RikA0A0A6YVV1 95 aa9.56□□□□□ -0.88
Sqstm1-202ENSMUST00000102774 Ubr4A2AN08 5180 aa9.55□□□□□ -0.88
Sqstm1-202ENSMUST00000102774 Krtap16-3Q8C1I6 86 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms