Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm25239-201ENSMUST00000174915 86 ntBASIC25,62■■□□□ 1,69
Herc2Q4U2R1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,83■■□□□ 1,41
Herc2Q4U2R1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Herc2Q4U2R1 Gm24109-201ENSMUST00000175489 103 ntBASIC22,64■■□□□ 1,22
Herc2Q4U2R1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
Herc2Q4U2R1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,65■■□□□ 1,06
Herc2Q4U2R1 Gm15042-201ENSMUST00000120212 883 ntBASIC21,58■■□□□ 1,05
Herc2Q4U2R1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Herc2Q4U2R1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Herc2Q4U2R1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Herc2Q4U2R1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,17■□□□□ 0,98
Herc2Q4U2R1 Gm23366-201ENSMUST00000175022 89 ntBASIC21,14■□□□□ 0,97
Herc2Q4U2R1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,11■□□□□ 0,97
Herc2Q4U2R1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Herc2Q4U2R1 Gm15045-201ENSMUST00000117359 883 ntBASIC21,06■□□□□ 0,96
Herc2Q4U2R1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,02■□□□□ 0,96
Herc2Q4U2R1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
Herc2Q4U2R1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20,47■□□□□ 0,87
Herc2Q4U2R1 Gm25238-201ENSMUST00000174914 89 ntBASIC20,45■□□□□ 0,86
Herc2Q4U2R1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20,33■□□□□ 0,85
Herc2Q4U2R1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20,26■□□□□ 0,83
Herc2Q4U2R1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20,1■□□□□ 0,81
Herc2Q4U2R1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0,79
Herc2Q4U2R1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0,79
Herc2Q4U2R1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19,95■□□□□ 0,78
Herc2Q4U2R1 Gm25262-201ENSMUST00000174934 133 ntBASIC19,93■□□□□ 0,78
Herc2Q4U2R1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19,88■□□□□ 0,77
Herc2Q4U2R1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19,75■□□□□ 0,75
Herc2Q4U2R1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19,68■□□□□ 0,74
Herc2Q4U2R1 Gm26115-201ENSMUST00000175605 87 ntBASIC19,65■□□□□ 0,74
Herc2Q4U2R1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19,61■□□□□ 0,73
Herc2Q4U2R1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19,61■□□□□ 0,73
Herc2Q4U2R1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19,44■□□□□ 0,7
Herc2Q4U2R1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Herc2Q4U2R1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19,39■□□□□ 0,69
Herc2Q4U2R1 Gm8109-201ENSMUST00000194076 746 ntBASIC19,36■□□□□ 0,69
Herc2Q4U2R1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19,3■□□□□ 0,68
Herc2Q4U2R1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19,3■□□□□ 0,68
Herc2Q4U2R1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19,21■□□□□ 0,67
Herc2Q4U2R1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19,08■□□□□ 0,64
Herc2Q4U2R1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19,01■□□□□ 0,63
Herc2Q4U2R1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18,99■□□□□ 0,63
Herc2Q4U2R1 Rab21-202ENSMUST00000218831 843 ntBASIC18,96■□□□□ 0,63
Herc2Q4U2R1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Herc2Q4U2R1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Herc2Q4U2R1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18,88■□□□□ 0,61
Herc2Q4U2R1 Gm24804-201ENSMUST00000174982 85 ntBASIC18,85■□□□□ 0,61
Herc2Q4U2R1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18,83■□□□□ 0,61
Herc2Q4U2R1 Gm27325-201ENSMUST00000175467 74 ntBASIC18,8■□□□□ 0,6
Herc2Q4U2R1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Herc2Q4U2R1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Herc2Q4U2R1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18,75■□□□□ 0,59
Herc2Q4U2R1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18,75■□□□□ 0,59
Herc2Q4U2R1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18,74■□□□□ 0,59
Herc2Q4U2R1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18,71■□□□□ 0,59
Herc2Q4U2R1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18,69■□□□□ 0,58
Herc2Q4U2R1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18,65■□□□□ 0,58
Herc2Q4U2R1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Herc2Q4U2R1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Herc2Q4U2R1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18,59■□□□□ 0,57
Herc2Q4U2R1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18,56■□□□□ 0,56
Herc2Q4U2R1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18,53■□□□□ 0,56
Herc2Q4U2R1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,56
Herc2Q4U2R1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Herc2Q4U2R1 Gm17082-201ENSMUST00000166043 1091 ntBASIC18,51■□□□□ 0,55
Herc2Q4U2R1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18,47■□□□□ 0,55
Herc2Q4U2R1 Zfp131-205ENSMUST00000223812 663 ntBASIC18,47■□□□□ 0,55
Herc2Q4U2R1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18,46■□□□□ 0,55
Herc2Q4U2R1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18,46■□□□□ 0,55
Herc2Q4U2R1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18,45■□□□□ 0,54
Herc2Q4U2R1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18,4■□□□□ 0,54
Herc2Q4U2R1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18,39■□□□□ 0,53
Herc2Q4U2R1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18,39■□□□□ 0,53
Herc2Q4U2R1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Herc2Q4U2R1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Herc2Q4U2R1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18,32■□□□□ 0,52
Herc2Q4U2R1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Herc2Q4U2R1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Herc2Q4U2R1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18,26■□□□□ 0,51
Herc2Q4U2R1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18,26■□□□□ 0,51
Herc2Q4U2R1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18,25■□□□□ 0,51
Herc2Q4U2R1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Herc2Q4U2R1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18,23■□□□□ 0,51
Herc2Q4U2R1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18,21■□□□□ 0,51
Herc2Q4U2R1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Herc2Q4U2R1 Gm27322-201ENSMUST00000184007 104 ntBASIC18,18■□□□□ 0,5
Herc2Q4U2R1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18,15■□□□□ 0,5
Herc2Q4U2R1 Gm5987-201ENSMUST00000196433 1151 ntBASIC18,15■□□□□ 0,5
Herc2Q4U2R1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18,14■□□□□ 0,5
Herc2Q4U2R1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18,11■□□□□ 0,49
Herc2Q4U2R1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18,09■□□□□ 0,49
Herc2Q4U2R1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18,07■□□□□ 0,48
Herc2Q4U2R1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18,07■□□□□ 0,48
Herc2Q4U2R1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18,05■□□□□ 0,48
Herc2Q4U2R1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18,03■□□□□ 0,48
Herc2Q4U2R1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18,01■□□□□ 0,47
Herc2Q4U2R1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18,01■□□□□ 0,47
Herc2Q4U2R1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18,01■□□□□ 0,47
Herc2Q4U2R1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0,47
Herc2Q4U2R1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17,99■□□□□ 0,47
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms