RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Gm35339A0A140LHH9 1649 aa40.57■■■■■ 4.09
Sqstm1-202ENSMUST00000102774 NischQ80TM9 1593 aa40.52■■■■■ 4.08
Sqstm1-202ENSMUST00000102774 Abcc9P70170 1546 aa39.31■■■■□ 3.88
Sqstm1-202ENSMUST00000102774 Abcc8B2RUS7 1588 aa38.83■■■■□ 3.81
Sqstm1-202ENSMUST00000102774 ScribQ80U72 1612 aa36.86■■■■□ 3.49
Sqstm1-202ENSMUST00000102774 Rhox8Q6VSS7 320 aa36.1■■■■□ 3.37
Sqstm1-202ENSMUST00000102774 Dcaf1Q80TR8 1506 aa36.03■■■■□ 3.36
Sqstm1-202ENSMUST00000102774 Kdm5dQ62240 1548 aa35.88■■■■□ 3.33
Sqstm1-202ENSMUST00000102774 NacadQ5SWP3 1504 aa35.79■■■■□ 3.32
Sqstm1-202ENSMUST00000102774 Rb1cc1Q9ESK9 1588 aa35.43■■■■□ 3.26
Sqstm1-202ENSMUST00000102774 Ccdc180J3QNE4 1664 aa35.12■■■■□ 3.21
Sqstm1-202ENSMUST00000102774 Sycp2Q9CUU3 1500 aa35.04■■■■□ 3.2
Sqstm1-202ENSMUST00000102774 Baz1aO88379 1555 aa34.98■■■■□ 3.19
Sqstm1-202ENSMUST00000102774 Rtl1Q7M732 1744 aa34.68■■■■□ 3.14
Sqstm1-202ENSMUST00000102774 Crybg2B7ZCC2 1516 aa34.6■■■■□ 3.13
Sqstm1-202ENSMUST00000102774 BicraF8VPZ9 1578 aa34.41■■■■□ 3.1
Sqstm1-202ENSMUST00000102774 Zcchc6Q5BLK4 1491 aaKnown RBP34.31■■■■□ 3.08
Sqstm1-202ENSMUST00000102774 Smarca2Q6DIC0 1577 aa34.07■■■■□ 3.05
Sqstm1-202ENSMUST00000102774 Ccdc136Q3TVA9 1136 aa33.62■■■□□ 2.97
Sqstm1-202ENSMUST00000102774 Cecr2E9Q2Z1 1453 aa33.52■■■□□ 2.96
Sqstm1-202ENSMUST00000102774 Smarca4Q3TKT4 1613 aaKnown RBP33.28■■■□□ 2.92
Sqstm1-202ENSMUST00000102774 Pds5bQ4VA53 1446 aaKnown RBP33.16■■■□□ 2.9
Sqstm1-202ENSMUST00000102774 Brd4Q9ESU6 1400 aaKnown RBP33.15■■■□□ 2.9
Sqstm1-202ENSMUST00000102774 Trim41Q5NCC3 630 aa33.09■■■□□ 2.89
Sqstm1-202ENSMUST00000102774 Atad2bE9Q166 1460 aaKnown RBP33.08■■■□□ 2.89
Sqstm1-202ENSMUST00000102774 Synj1Q8CHC4 1574 aa33.03■■■□□ 2.88
Sqstm1-202ENSMUST00000102774 Iqgap2Q3UQ44 1575 aa32.96■■■□□ 2.87
Sqstm1-202ENSMUST00000102774 CftrP26361 1476 aa32.94■■■□□ 2.86
Sqstm1-202ENSMUST00000102774 Cttnbp2B9EJA2 1648 aa32.92■■■□□ 2.86
Sqstm1-202ENSMUST00000102774 Ercc6F8VPZ5 1481 aa32.54■■■□□ 2.8
Sqstm1-202ENSMUST00000102774 Thoc2B1AZI6 1594 aaKnown RBP32.52■■■□□ 2.8
Sqstm1-202ENSMUST00000102774 Wdr62Q3U3T8 1523 aa32.49■■■□□ 2.79
Sqstm1-202ENSMUST00000102774 Esf1Q3V1V3 845 aaKnown RBP32.47■■■□□ 2.79
Sqstm1-202ENSMUST00000102774 Frmpd1A2AKB4 1549 aa32.44■■■□□ 2.78
Sqstm1-202ENSMUST00000102774 Golga3P55937 1487 aa32.38■■■□□ 2.77
Sqstm1-202ENSMUST00000102774 Cngb1E1AZ71 1325 aa32.3■■■□□ 2.76
Sqstm1-202ENSMUST00000102774 Top2bQ64511 1612 aa32.25■■■□□ 2.75
Sqstm1-202ENSMUST00000102774 HrcG5E8J6 738 aa32.19■■■□□ 2.74
Sqstm1-202ENSMUST00000102774 Unc13aQ4KUS2 1712 aa32.16■■■□□ 2.74
Sqstm1-202ENSMUST00000102774 Cc2d2aQ8CFW7 1633 aa32.1■■■□□ 2.73
Sqstm1-202ENSMUST00000102774 Fam135aQ6NS59 1506 aa32■■■□□ 2.71
Sqstm1-202ENSMUST00000102774 Phldb1Q6PDH0 1371 aaKnown RBP31.97■■■□□ 2.71
Sqstm1-202ENSMUST00000102774 Dnajc5bQ9CQ94 199 aa31.87■■■□□ 2.69
Sqstm1-202ENSMUST00000102774 Rsf1E9PWW9 1441 aaKnown RBP31.86■■■□□ 2.69
Sqstm1-202ENSMUST00000102774 Ccdc88bQ4QRL3 1481 aa31.83■■■□□ 2.69
Sqstm1-202ENSMUST00000102774 Fmn1Q05860 1466 aa31.8■■■□□ 2.68
Sqstm1-202ENSMUST00000102774 Lamc3Q9R0B6 1581 aa31.74■■■□□ 2.67
Sqstm1-202ENSMUST00000102774 Chic1Q8CBW7 227 aa31.73■■■□□ 2.67
Sqstm1-202ENSMUST00000102774 Cep164Q5DU05 1446 aa31.72■■■□□ 2.67
Sqstm1-202ENSMUST00000102774 TnnQ80Z71 1560 aa31.72■■■□□ 2.67
Sqstm1-202ENSMUST00000102774 Ubl4bQ9CQ84 188 aa31.66■■■□□ 2.66
Sqstm1-202ENSMUST00000102774 Kif15Q6P9L6 1387 aa31.65■■■□□ 2.66
Sqstm1-202ENSMUST00000102774 Baz1bQ9Z277 1479 aa31.53■■■□□ 2.64
Sqstm1-202ENSMUST00000102774 Top2aQ01320 1528 aaKnown RBP31.43■■■□□ 2.62
Sqstm1-202ENSMUST00000102774 Cux2P70298 1426 aa31.38■■■□□ 2.61
Sqstm1-202ENSMUST00000102774 Camsap1A2AHC3 1581 aa31.32■■■□□ 2.6
Sqstm1-202ENSMUST00000102774 Ccdc18Q640L5 1455 aa31.26■■■□□ 2.6
Sqstm1-202ENSMUST00000102774 Mrc2Q64449 1479 aa31.26■■■□□ 2.59
Sqstm1-202ENSMUST00000102774 Il27Q8K3I6 234 aa31.2■■■□□ 2.58
Sqstm1-202ENSMUST00000102774 Gab3Q8BSM5 595 aa31.19■■■□□ 2.58
Sqstm1-202ENSMUST00000102774 Npm1Q61937 292 aaKnown RBP31.12■■■□□ 2.57
Sqstm1-202ENSMUST00000102774 Grin2bQ01097 1482 aa30.97■■■□□ 2.55
Sqstm1-202ENSMUST00000102774 Kif21aQ9QXL2 1672 aa30.97■■■□□ 2.55
Sqstm1-202ENSMUST00000102774 Rapgef2Q8CHG7 1496 aa30.92■■■□□ 2.54
Sqstm1-202ENSMUST00000102774 LrpprcQ6PB66 1392 aaKnown RBP30.91■■■□□ 2.54
Sqstm1-202ENSMUST00000102774 NrkQ9R0G8 1455 aa30.89■■■□□ 2.53
Sqstm1-202ENSMUST00000102774 PogzQ8BZH4 1409 aaKnown RBP30.82■■■□□ 2.52
Sqstm1-202ENSMUST00000102774 PtprkP35822 1457 aa30.82■■■□□ 2.52
Sqstm1-202ENSMUST00000102774 Shroom4Q1W617 1475 aa30.82■■■□□ 2.52
Sqstm1-202ENSMUST00000102774 Dhx29Q6PGC1 1365 aaKnown RBP30.79■■■□□ 2.52
Sqstm1-202ENSMUST00000102774 Npm2Q80W85 207 aa30.76■■■□□ 2.52
Sqstm1-202ENSMUST00000102774 Duox2A2AQ99 1517 aa30.73■■■□□ 2.51
Sqstm1-202ENSMUST00000102774 Crocc2F6XLV1 1638 aa30.71■■■□□ 2.51
Sqstm1-202ENSMUST00000102774 Cep162Q6ZQ06 1403 aa30.68■■■□□ 2.5
Sqstm1-202ENSMUST00000102774 Efcab5A0JP43 1406 aa30.67■■■□□ 2.5
Sqstm1-202ENSMUST00000102774 Eif4g1Q6NZJ6 1600 aaKnown RBP30.65■■■□□ 2.5
Sqstm1-202ENSMUST00000102774 Lrriq1Q0P5X1 1673 aa30.57■■■□□ 2.48
Sqstm1-202ENSMUST00000102774 Samd9lQ69Z37 1561 aa30.54■■■□□ 2.48
Sqstm1-202ENSMUST00000102774 Arhgap35Q91YM2 1499 aa30.53■■■□□ 2.48
Sqstm1-202ENSMUST00000102774 Plb1Q3TTY0 1478 aa30.48■■■□□ 2.47
Sqstm1-202ENSMUST00000102774 Urb2E9Q7L1 1524 aaKnown RBP30.47■■■□□ 2.47
Sqstm1-202ENSMUST00000102774 Mroh2bQ7M6Y6 1581 aa30.45■■■□□ 2.47
Sqstm1-202ENSMUST00000102774 Myt1lP97500 1187 aa30.43■■■□□ 2.46
Sqstm1-202ENSMUST00000102774 Zeb1Q64318 1117 aa30.43■■■□□ 2.46
Sqstm1-202ENSMUST00000102774 Map3k1P53349 1493 aa30.43■■■□□ 2.46
Sqstm1-202ENSMUST00000102774 SynmQ70IV5 1561 aa30.35■■■□□ 2.45
Sqstm1-202ENSMUST00000102774 Rad54l2Q99NG0 1466 aa30.3■■■□□ 2.44
Sqstm1-202ENSMUST00000102774 AqrQ8CFQ3 1481 aaKnown RBP30.26■■■□□ 2.43
Sqstm1-202ENSMUST00000102774 Ift140E9PY46 1464 aa30.26■■■□□ 2.43
Sqstm1-202ENSMUST00000102774 Disp1Q3TDN0 1521 aa30.23■■■□□ 2.43
Sqstm1-202ENSMUST00000102774 Clip1Q922J3 1391 aa30.21■■■□□ 2.43
Sqstm1-202ENSMUST00000102774 Setd1bQ8CFT2 1985 aa30.18■■■□□ 2.42
Sqstm1-202ENSMUST00000102774 Magi3Q9EQJ9 1476 aa30.17■■■□□ 2.42
Sqstm1-202ENSMUST00000102774 Pbrm1Q8BSQ9 1634 aaKnown RBP30.16■■■□□ 2.42
Sqstm1-202ENSMUST00000102774 Carmil1Q6EDY6 1374 aa30.16■■■□□ 2.42
Sqstm1-202ENSMUST00000102774 Grin2aP35436 1464 aa30.13■■■□□ 2.41
Sqstm1-202ENSMUST00000102774 Pla2r1Q62028 1487 aa30.11■■■□□ 2.41
Sqstm1-202ENSMUST00000102774 Ehmt2Q9Z148 1263 aaKnown RBP30.11■■■□□ 2.41
Sqstm1-202ENSMUST00000102774 Eif4g3Q80XI3 1579 aaKnown RBP30.11■■■□□ 2.41
Sqstm1-202ENSMUST00000102774 Nup160Q9Z0W3 1402 aaKnown RBP30.05■■■□□ 2.4
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms