RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 MplkipQ9D011 178 aa8.34□□□□□ -1.07
Ercc1-201ENSMUST00000003645 Gm45213A0A0U1RNZ6 101 aa8.31□□□□□ -1.08
Ercc1-201ENSMUST00000003645 Reg3aO09037 175 aa8.28□□□□□ -1.08
Ercc1-201ENSMUST00000003645 Tmem254aP0DN89 123 aa8.26□□□□□ -1.09
Ercc1-201ENSMUST00000003645 Tmem254bP0DN90 123 aa8.26□□□□□ -1.09
Ercc1-201ENSMUST00000003645 Tmem254cP0DN91 123 aa8.26□□□□□ -1.09
Ercc1-201ENSMUST00000003645 Cypt15B1AXS0 87 aa8.25□□□□□ -1.09
Ercc1-201ENSMUST00000003645 Trav3-1Q5R1I8 114 aa8.24□□□□□ -1.09
Ercc1-201ENSMUST00000003645 Igkv8-19A0A0G2JFN8 121 aa8.23□□□□□ -1.09
Ercc1-201ENSMUST00000003645 Gm11939A2A592 99 aa8.21□□□□□ -1.1
Ercc1-201ENSMUST00000003645 Defa21Q8C1P2 93 aa8.21□□□□□ -1.1
Ercc1-201ENSMUST00000003645 Gm5965D3Z724 196 aa8.19□□□□□ -1.1
Ercc1-201ENSMUST00000003645 Cystm1Q8K353 104 aa8.19□□□□□ -1.1
Ercc1-201ENSMUST00000003645 Igkv3-3A0A140T8Q0 119 aa8.17□□□□□ -1.1
Ercc1-201ENSMUST00000003645 Lrp2A2ARV4 4660 aa8.17□□□□□ -1.1
Ercc1-201ENSMUST00000003645 GhrhP16043 103 aa8.13□□□□□ -1.11
Ercc1-201ENSMUST00000003645 Gm5767A0A0J9YTU8 78 aa8.12□□□□□ -1.11
Ercc1-201ENSMUST00000003645 BatfO35284 125 aa8.11□□□□□ -1.11
Ercc1-201ENSMUST00000003645 Hist1h4aP62806 103 aaKnown RBP8.11□□□□□ -1.11
Ercc1-201ENSMUST00000003645 Prr15lQ8JZM2 100 aa8.11□□□□□ -1.11
Ercc1-201ENSMUST00000003645 Gm26620Q9CY65 116 aa8.11□□□□□ -1.11
Ercc1-201ENSMUST00000003645 Gm18596A0A1W2P860 280 aa8.1□□□□□ -1.11
Ercc1-201ENSMUST00000003645 A930033H14RikG5E8X6 103 aa8.08□□□□□ -1.12
Ercc1-201ENSMUST00000003645 Herc1E9PZP8 4859 aa8.07□□□□□ -1.12
Ercc1-201ENSMUST00000003645 BikO70337 150 aa8.04□□□□□ -1.12
Ercc1-201ENSMUST00000003645 Defb13Q8R2I4 64 aa8.02□□□□□ -1.13
Ercc1-201ENSMUST00000003645 Gm10267M0QWD8 85 aa8.01□□□□□ -1.13
Ercc1-201ENSMUST00000003645 Fam229bQ8CF36 80 aa8.01□□□□□ -1.13
Ercc1-201ENSMUST00000003645 A0A286YE49 62 aa8□□□□□ -1.13
Ercc1-201ENSMUST00000003645 Atp5eP56382 52 aa7.98□□□□□ -1.13
Ercc1-201ENSMUST00000003645 Spink8Q09TK9 105 aa7.97□□□□□ -1.13
Ercc1-201ENSMUST00000003645 Samd13D3YUG0 102 aa7.97□□□□□ -1.13
Ercc1-201ENSMUST00000003645 Ndufc1Q9CQY9 76 aa7.96□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Gm9821Q8K076 103 aa7.95□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Scgb1b2O35176 93 aa7.93□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Krtap3-2Q9D638 99 aa7.92□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Krtap3-3Q9D7P0 99 aa7.92□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Naa38Q9D2U5 125 aa7.91□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Krtap15-1Q9QZU5 150 aa7.91□□□□□ -1.14
Ercc1-201ENSMUST00000003645 Rpl37Q9D823 97 aa7.89□□□□□ -1.15
Ercc1-201ENSMUST00000003645 Prm1P02319 51 aa7.87□□□□□ -1.15
Ercc1-201ENSMUST00000003645 1700074P13RikQ9D9G7 251 aa7.84□□□□□ -1.15
Ercc1-201ENSMUST00000003645 7530416G11RikJ3QJX6 159 aa7.84□□□□□ -1.16
Ercc1-201ENSMUST00000003645 Gm9789Q8BIG3 52 aa7.83□□□□□ -1.16
Ercc1-201ENSMUST00000003645 Gm7735D3YX18 52 aa7.82□□□□□ -1.16
Ercc1-201ENSMUST00000003645 4930518I15RikQ3V2W7 57 aa7.82□□□□□ -1.16
Ercc1-201ENSMUST00000003645 Anapc13Q8R034 74 aa7.81□□□□□ -1.16
Ercc1-201ENSMUST00000003645 Ush2AQ2QI47 5193 aa7.8□□□□□ -1.16
Ercc1-201ENSMUST00000003645 Serp2Q6TAW2 65 aa7.75□□□□□ -1.17
Ercc1-201ENSMUST00000003645 Sec61bQ9CQS8 96 aaKnown RBP7.74□□□□□ -1.17
Ercc1-201ENSMUST00000003645 Gm4491E0CX42 125 aa7.71□□□□□ -1.18
Ercc1-201ENSMUST00000003645 2310034C09RikQ9D746 214 aa7.71□□□□□ -1.18
Ercc1-201ENSMUST00000003645 Hmcn2A2AJ76 5100 aa7.7□□□□□ -1.18
Ercc1-201ENSMUST00000003645 Rnase13Q5GAM7 153 aa7.7□□□□□ -1.18
Ercc1-201ENSMUST00000003645 2310057N15RikQ9D6T8 200 aa7.7□□□□□ -1.18
Ercc1-201ENSMUST00000003645 Apoc4Q61268 124 aa7.68□□□□□ -1.18
Ercc1-201ENSMUST00000003645 Atox1O08997 68 aaKnown RBP7.65□□□□□ -1.18
Ercc1-201ENSMUST00000003645 Chtf8P0CG14 533 aa7.63□□□□□ -1.19
Ercc1-201ENSMUST00000003645 B230307C23RikQ8BLB2 64 aa7.63□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Coa6Q8BGD8 79 aa7.62□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Spint4Q9D263 159 aa7.62□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Gm28539A0A087WSL9 92 aa7.61□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Q8BGJ3 129 aa7.6□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Gm10999F6Q4M4 69 aa7.59□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Defb38Q7TNV7 63 aa7.59□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Ubr4A2AN08 5180 aa7.59□□□□□ -1.19
Ercc1-201ENSMUST00000003645 Gm17416Q30KP4 66 aa7.59□□□□□ -1.2
Ercc1-201ENSMUST00000003645 Krtap1-3A2A588 173 aa7.55□□□□□ -1.2
Ercc1-201ENSMUST00000003645 Gm21798J3QNU5 87 aa7.55□□□□□ -1.2
Ercc1-201ENSMUST00000003645 Gm10160F6Y577 67 aa7.54□□□□□ -1.2
Ercc1-201ENSMUST00000003645 2310079G19RikQ9D6L6 185 aa7.51□□□□□ -1.21
Ercc1-201ENSMUST00000003645 9230102O04RikA2ASX7 82 aa7.5□□□□□ -1.21
Ercc1-201ENSMUST00000003645 Krtap16-3Q8C1I6 86 aa7.48□□□□□ -1.21
Ercc1-201ENSMUST00000003645 4932415D10RikA0A1W2P6U8 4986 aa7.48□□□□□ -1.21
Ercc1-201ENSMUST00000003645 Crct1Q6PAI5 102 aa7.47□□□□□ -1.21
Ercc1-201ENSMUST00000003645 4930507D05RikQ8C9C9 103 aa7.47□□□□□ -1.21
Ercc1-201ENSMUST00000003645 Pcp4P63054 62 aa7.46□□□□□ -1.21
Ercc1-201ENSMUST00000003645 Krtap19-1Q925H2 87 aa7.46□□□□□ -1.22
Ercc1-201ENSMUST00000003645 Gm10643Q3URG9 111 aa7.45□□□□□ -1.22
Ercc1-201ENSMUST00000003645 Prr13Q9CQJ5 137 aa7.43□□□□□ -1.22
Ercc1-201ENSMUST00000003645 Krtap19-3Q925H6 87 aa7.42□□□□□ -1.22
Ercc1-201ENSMUST00000003645 Coa5Q99M07 74 aa7.41□□□□□ -1.22
Ercc1-201ENSMUST00000003645 Fam229aB2KGE5 128 aa7.36□□□□□ -1.23
Ercc1-201ENSMUST00000003645 ZanO88799 5376 aa7.35□□□□□ -1.23
Ercc1-201ENSMUST00000003645 2210017I01RikA0A0A6YVV1 95 aa7.33□□□□□ -1.24
Ercc1-201ENSMUST00000003645 Smlr1J3QMJ4 66 aa7.33□□□□□ -1.24
Ercc1-201ENSMUST00000003645 Krtap13-1Q8K198 168 aa7.31□□□□□ -1.24
Ercc1-201ENSMUST00000003645 Gm10318A0A1W2P728 225 aa7.29□□□□□ -1.24
Ercc1-201ENSMUST00000003645 LorP18165 486 aa7.29□□□□□ -1.24
Ercc1-201ENSMUST00000003645 Tmem258P61166 79 aa7.28□□□□□ -1.24
Ercc1-201ENSMUST00000003645 Gm19402J3QJV4 266 aa7.27□□□□□ -1.25
Ercc1-201ENSMUST00000003645 SnurfQ9WU12 71 aa7.26□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Defb1P56386 69 aa7.24□□□□□ -1.25
Ercc1-201ENSMUST00000003645 1700042G07RikB1AUF7 90 aa7.23□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Rnf213E9Q555 5152 aaKnown RBP7.23□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Gm19935A0A1B0GSF9 52 aa7.22□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Krtap1-5A2A590 122 aa7.22□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Pet100P0DJE0 76 aa7.22□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Krtap1-4Q3V2D6 188 aa7.21□□□□□ -1.25
Ercc1-201ENSMUST00000003645 Fat4Q2PZL6 4981 aa7.2□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms