RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm35339A0A140LHH9 1649 aa32.01■■■□□ 2.71
Ercc1-201ENSMUST00000003645 NischQ80TM9 1593 aa31.84■■■□□ 2.69
Ercc1-201ENSMUST00000003645 Abcc9P70170 1546 aa30.89■■■□□ 2.53
Ercc1-201ENSMUST00000003645 Abcc8B2RUS7 1588 aa30.66■■■□□ 2.5
Ercc1-201ENSMUST00000003645 ScribQ80U72 1612 aa29.17■■■□□ 2.26
Ercc1-201ENSMUST00000003645 Dcaf1Q80TR8 1506 aa28.42■■■□□ 2.14
Ercc1-201ENSMUST00000003645 NacadQ5SWP3 1504 aa28.36■■■□□ 2.13
Ercc1-201ENSMUST00000003645 Kdm5dQ62240 1548 aa28.34■■■□□ 2.13
Ercc1-201ENSMUST00000003645 Rhox8Q6VSS7 320 aa28■■■□□ 2.07
Ercc1-201ENSMUST00000003645 Sycp2Q9CUU3 1500 aa27.79■■■□□ 2.04
Ercc1-201ENSMUST00000003645 Rb1cc1Q9ESK9 1588 aa27.76■■■□□ 2.03
Ercc1-201ENSMUST00000003645 Ccdc180J3QNE4 1664 aa27.51■■□□□ 1.99
Ercc1-201ENSMUST00000003645 Baz1aO88379 1555 aa27.44■■□□□ 1.98
Ercc1-201ENSMUST00000003645 Crybg2B7ZCC2 1516 aa27.34■■□□□ 1.97
Ercc1-201ENSMUST00000003645 BicraF8VPZ9 1578 aa27.29■■□□□ 1.96
Ercc1-201ENSMUST00000003645 Zcchc6Q5BLK4 1491 aaKnown RBP26.91■■□□□ 1.9
Ercc1-201ENSMUST00000003645 Smarca2Q6DIC0 1577 aa26.71■■□□□ 1.87
Ercc1-201ENSMUST00000003645 Rtl1Q7M732 1744 aa26.63■■□□□ 1.85
Ercc1-201ENSMUST00000003645 Pds5bQ4VA53 1446 aaKnown RBP26.42■■□□□ 1.82
Ercc1-201ENSMUST00000003645 Cecr2E9Q2Z1 1453 aa26.41■■□□□ 1.82
Ercc1-201ENSMUST00000003645 Atad2bE9Q166 1460 aaKnown RBP26.3■■□□□ 1.8
Ercc1-201ENSMUST00000003645 Smarca4Q3TKT4 1613 aaKnown RBP26.26■■□□□ 1.8
Ercc1-201ENSMUST00000003645 Ccdc136Q3TVA9 1136 aa26.15■■□□□ 1.78
Ercc1-201ENSMUST00000003645 Iqgap2Q3UQ44 1575 aa26.03■■□□□ 1.76
Ercc1-201ENSMUST00000003645 Brd4Q9ESU6 1400 aaKnown RBP25.99■■□□□ 1.75
Ercc1-201ENSMUST00000003645 Thoc2B1AZI6 1594 aaKnown RBP25.96■■□□□ 1.75
Ercc1-201ENSMUST00000003645 CftrP26361 1476 aa25.92■■□□□ 1.74
Ercc1-201ENSMUST00000003645 Synj1Q8CHC4 1574 aa25.89■■□□□ 1.74
Ercc1-201ENSMUST00000003645 Trim41Q5NCC3 630 aa25.82■■□□□ 1.72
Ercc1-201ENSMUST00000003645 Ercc6F8VPZ5 1481 aa25.82■■□□□ 1.72
Ercc1-201ENSMUST00000003645 Cttnbp2B9EJA2 1648 aa25.81■■□□□ 1.72
Ercc1-201ENSMUST00000003645 Wdr62Q3U3T8 1523 aa25.75■■□□□ 1.71
Ercc1-201ENSMUST00000003645 Frmpd1A2AKB4 1549 aa25.73■■□□□ 1.71
Ercc1-201ENSMUST00000003645 Dnajc5bQ9CQ94 199 aa25.72■■□□□ 1.71
Ercc1-201ENSMUST00000003645 Cc2d2aQ8CFW7 1633 aa25.54■■□□□ 1.68
Ercc1-201ENSMUST00000003645 Fam135aQ6NS59 1506 aa25.5■■□□□ 1.67
Ercc1-201ENSMUST00000003645 Phldb1Q6PDH0 1371 aaKnown RBP25.47■■□□□ 1.67
Ercc1-201ENSMUST00000003645 Esf1Q3V1V3 845 aaKnown RBP25.43■■□□□ 1.66
Ercc1-201ENSMUST00000003645 Unc13aQ4KUS2 1712 aa25.3■■□□□ 1.64
Ercc1-201ENSMUST00000003645 Golga3P55937 1487 aa25.3■■□□□ 1.64
Ercc1-201ENSMUST00000003645 Baz1bQ9Z277 1479 aa25.25■■□□□ 1.63
Ercc1-201ENSMUST00000003645 Ubl4bQ9CQ84 188 aa25.18■■□□□ 1.62
Ercc1-201ENSMUST00000003645 Top2bQ64511 1612 aa25.17■■□□□ 1.62
Ercc1-201ENSMUST00000003645 Cngb1E1AZ71 1325 aa25.1■■□□□ 1.61
Ercc1-201ENSMUST00000003645 Rsf1E9PWW9 1441 aaKnown RBP25.07■■□□□ 1.6
Ercc1-201ENSMUST00000003645 Lamc3Q9R0B6 1581 aa25.02■■□□□ 1.6
Ercc1-201ENSMUST00000003645 Kif15Q6P9L6 1387 aa24.97■■□□□ 1.59
Ercc1-201ENSMUST00000003645 TnnQ80Z71 1560 aa24.91■■□□□ 1.58
Ercc1-201ENSMUST00000003645 Mrc2Q64449 1479 aa24.9■■□□□ 1.58
Ercc1-201ENSMUST00000003645 Fmn1Q05860 1466 aa24.89■■□□□ 1.57
Ercc1-201ENSMUST00000003645 Cux2P70298 1426 aa24.84■■□□□ 1.57
Ercc1-201ENSMUST00000003645 HrcG5E8J6 738 aa24.83■■□□□ 1.57
Ercc1-201ENSMUST00000003645 Ccdc88bQ4QRL3 1481 aa24.77■■□□□ 1.56
Ercc1-201ENSMUST00000003645 Chic1Q8CBW7 227 aa24.67■■□□□ 1.54
Ercc1-201ENSMUST00000003645 Npm1Q61937 292 aaKnown RBP24.61■■□□□ 1.53
Ercc1-201ENSMUST00000003645 Ccdc18Q640L5 1455 aa24.61■■□□□ 1.53
Ercc1-201ENSMUST00000003645 Camsap1A2AHC3 1581 aa24.61■■□□□ 1.53
Ercc1-201ENSMUST00000003645 Cep164Q5DU05 1446 aa24.57■■□□□ 1.52
Ercc1-201ENSMUST00000003645 Top2aQ01320 1528 aaKnown RBP24.52■■□□□ 1.52
Ercc1-201ENSMUST00000003645 Il27Q8K3I6 234 aa24.49■■□□□ 1.51
Ercc1-201ENSMUST00000003645 Kif21aQ9QXL2 1672 aa24.46■■□□□ 1.51
Ercc1-201ENSMUST00000003645 LrpprcQ6PB66 1392 aaKnown RBP24.45■■□□□ 1.5
Ercc1-201ENSMUST00000003645 Dhx29Q6PGC1 1365 aaKnown RBP24.36■■□□□ 1.49
Ercc1-201ENSMUST00000003645 Grin2bQ01097 1482 aa24.36■■□□□ 1.49
Ercc1-201ENSMUST00000003645 PogzQ8BZH4 1409 aaKnown RBP24.34■■□□□ 1.49
Ercc1-201ENSMUST00000003645 NrkQ9R0G8 1455 aa24.26■■□□□ 1.47
Ercc1-201ENSMUST00000003645 Lrriq1Q0P5X1 1673 aa24.26■■□□□ 1.47
Ercc1-201ENSMUST00000003645 Duox2A2AQ99 1517 aa24.23■■□□□ 1.47
Ercc1-201ENSMUST00000003645 Crocc2F6XLV1 1638 aa24.21■■□□□ 1.47
Ercc1-201ENSMUST00000003645 Efcab5A0JP43 1406 aa24.2■■□□□ 1.46
Ercc1-201ENSMUST00000003645 Urb2E9Q7L1 1524 aaKnown RBP24.17■■□□□ 1.46
Ercc1-201ENSMUST00000003645 Plb1Q3TTY0 1478 aa24.17■■□□□ 1.46
Ercc1-201ENSMUST00000003645 Shroom4Q1W617 1475 aa24.15■■□□□ 1.46
Ercc1-201ENSMUST00000003645 PtprkP35822 1457 aa24.14■■□□□ 1.46
Ercc1-201ENSMUST00000003645 Gab3Q8BSM5 595 aa24.08■■□□□ 1.45
Ercc1-201ENSMUST00000003645 Rapgef2Q8CHG7 1496 aa24.05■■□□□ 1.44
Ercc1-201ENSMUST00000003645 Samd9lQ69Z37 1561 aa24.01■■□□□ 1.43
Ercc1-201ENSMUST00000003645 Ift140E9PY46 1464 aa24■■□□□ 1.43
Ercc1-201ENSMUST00000003645 Disp1Q3TDN0 1521 aa23.94■■□□□ 1.42
Ercc1-201ENSMUST00000003645 Eif4g3Q80XI3 1579 aaKnown RBP23.93■■□□□ 1.42
Ercc1-201ENSMUST00000003645 Npm2Q80W85 207 aa23.92■■□□□ 1.42
Ercc1-201ENSMUST00000003645 Cep162Q6ZQ06 1403 aa23.87■■□□□ 1.41
Ercc1-201ENSMUST00000003645 Mroh2bQ7M6Y6 1581 aa23.86■■□□□ 1.41
Ercc1-201ENSMUST00000003645 Rad54l2Q99NG0 1466 aa23.86■■□□□ 1.41
Ercc1-201ENSMUST00000003645 Eif4g1Q6NZJ6 1600 aaKnown RBP23.84■■□□□ 1.41
Ercc1-201ENSMUST00000003645 Arhgap35Q91YM2 1499 aa23.84■■□□□ 1.41
Ercc1-201ENSMUST00000003645 Nup160Q9Z0W3 1402 aaKnown RBP23.82■■□□□ 1.4
Ercc1-201ENSMUST00000003645 SynmQ70IV5 1561 aa23.82■■□□□ 1.4
Ercc1-201ENSMUST00000003645 Magi3Q9EQJ9 1476 aa23.8■■□□□ 1.4
Ercc1-201ENSMUST00000003645 Pbrm1Q8BSQ9 1634 aaKnown RBP23.78■■□□□ 1.4
Ercc1-201ENSMUST00000003645 Map3k1P53349 1493 aa23.78■■□□□ 1.4
Ercc1-201ENSMUST00000003645 Grin2aP35436 1464 aa23.76■■□□□ 1.39
Ercc1-201ENSMUST00000003645 Rusc2Q80U22 1514 aa23.75■■□□□ 1.39
Ercc1-201ENSMUST00000003645 Zeb1Q64318 1117 aa23.75■■□□□ 1.39
Ercc1-201ENSMUST00000003645 Cc2d2bA0A286YDU8 1405 aa23.74■■□□□ 1.39
Ercc1-201ENSMUST00000003645 Pla2r1Q62028 1487 aa23.72■■□□□ 1.39
Ercc1-201ENSMUST00000003645 Gpatch8A2A6A1 1505 aa23.7■■□□□ 1.38
Ercc1-201ENSMUST00000003645 AqrQ8CFQ3 1481 aaKnown RBP23.69■■□□□ 1.38
Ercc1-201ENSMUST00000003645 Setd1bQ8CFT2 1985 aa23.66■■□□□ 1.38
Ercc1-201ENSMUST00000003645 Carmil1Q6EDY6 1374 aa23.66■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms