RNA–Protein interactions for RNA: ENSMUST00000000925.9

Smarcb1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarcb1, Length 1,660 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1-201ENSMUST00000000925 Defa21Q8C1P2 93 aa7.66□□□□□ -1.18
Smarcb1-201ENSMUST00000000925 Gm45213A0A0U1RNZ6 101 aa7.63□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Fam240bJ3QMB3 78 aa7.63□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Cdip1Q9DB75 208 aa7.63□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Cypt15B1AXS0 87 aa7.6□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Tmem254aP0DN89 123 aa7.59□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Tmem254bP0DN90 123 aa7.59□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Tmem254cP0DN91 123 aa7.59□□□□□ -1.19
Smarcb1-201ENSMUST00000000925 Trav3-1Q5R1I8 114 aa7.58□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 GhrhP16043 103 aa7.57□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 Lrp2A2ARV4 4660 aa7.57□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 Igkv8-19A0A0G2JFN8 121 aa7.57□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 BatfO35284 125 aa7.56□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 Gm5965D3Z724 196 aa7.54□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 Hist1h4aP62806 103 aaKnown RBP7.54□□□□□ -1.2
Smarcb1-201ENSMUST00000000925 Igkv3-3A0A140T8Q0 119 aa7.51□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 Prr15lQ8JZM2 100 aa7.51□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 Gm5767A0A0J9YTU8 78 aa7.49□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 BikO70337 150 aa7.47□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 Gm26620Q9CY65 116 aa7.47□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 Gm11939A2A592 99 aa7.47□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 Cystm1Q8K353 104 aa7.47□□□□□ -1.21
Smarcb1-201ENSMUST00000000925 Herc1E9PZP8 4859 aa7.45□□□□□ -1.22
Smarcb1-201ENSMUST00000000925 Gm18596A0A1W2P860 280 aa7.45□□□□□ -1.22
Smarcb1-201ENSMUST00000000925 A930033H14RikG5E8X6 103 aa7.44□□□□□ -1.22
Smarcb1-201ENSMUST00000000925 Defb13Q8R2I4 64 aa7.43□□□□□ -1.22
Smarcb1-201ENSMUST00000000925 Gm10267M0QWD8 85 aa7.41□□□□□ -1.22
Smarcb1-201ENSMUST00000000925 Samd13D3YUG0 102 aa7.41□□□□□ -1.22
Smarcb1-201ENSMUST00000000925 A0A286YE49 62 aa7.39□□□□□ -1.23
Smarcb1-201ENSMUST00000000925 Spink8Q09TK9 105 aa7.38□□□□□ -1.23
Smarcb1-201ENSMUST00000000925 Fam229bQ8CF36 80 aa7.35□□□□□ -1.23
Smarcb1-201ENSMUST00000000925 Scgb1b2O35176 93 aa7.35□□□□□ -1.23
Smarcb1-201ENSMUST00000000925 Gm9821Q8K076 103 aa7.35□□□□□ -1.23
Smarcb1-201ENSMUST00000000925 Krtap15-1Q9QZU5 150 aa7.34□□□□□ -1.23
Smarcb1-201ENSMUST00000000925 Atp5eP56382 52 aa7.33□□□□□ -1.24
Smarcb1-201ENSMUST00000000925 Naa38Q9D2U5 125 aa7.32□□□□□ -1.24
Smarcb1-201ENSMUST00000000925 Ndufc1Q9CQY9 76 aa7.31□□□□□ -1.24
Smarcb1-201ENSMUST00000000925 1700074P13RikQ9D9G7 251 aa7.26□□□□□ -1.25
Smarcb1-201ENSMUST00000000925 Rpl37Q9D823 97 aa7.24□□□□□ -1.25
Smarcb1-201ENSMUST00000000925 Anapc13Q8R034 74 aa7.22□□□□□ -1.25
Smarcb1-201ENSMUST00000000925 7530416G11RikJ3QJX6 159 aa7.17□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 Prm1P02319 51 aa7.17□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 4930518I15RikQ3V2W7 57 aa7.17□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 Krtap3-2Q9D638 99 aa7.17□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 Krtap3-3Q9D7P0 99 aa7.17□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 Ush2AQ2QI47 5193 aa7.17□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 Apoc4Q61268 124 aa7.16□□□□□ -1.26
Smarcb1-201ENSMUST00000000925 Sec61bQ9CQS8 96 aaKnown RBP7.15□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 Gm9789Q8BIG3 52 aa7.13□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 2310057N15RikQ9D6T8 200 aa7.13□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 Rnase13Q5GAM7 153 aa7.12□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 Gm7735D3YX18 52 aa7.12□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 Serp2Q6TAW2 65 aa7.12□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 Gm4491E0CX42 125 aa7.1□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 B230307C23RikQ8BLB2 64 aa7.09□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 2310034C09RikQ9D746 214 aa7.09□□□□□ -1.27
Smarcb1-201ENSMUST00000000925 Atox1O08997 68 aaKnown RBP7.06□□□□□ -1.28
Smarcb1-201ENSMUST00000000925 Defb38Q7TNV7 63 aa7.06□□□□□ -1.28
Smarcb1-201ENSMUST00000000925 Gm10999F6Q4M4 69 aa7.06□□□□□ -1.28
Smarcb1-201ENSMUST00000000925 Q8BGJ3 129 aa7.05□□□□□ -1.28
Smarcb1-201ENSMUST00000000925 Hmcn2A2AJ76 5100 aa7.04□□□□□ -1.28
Smarcb1-201ENSMUST00000000925 Coa6Q8BGD8 79 aa7.02□□□□□ -1.29
Smarcb1-201ENSMUST00000000925 Chtf8P0CG14 533 aa7□□□□□ -1.29
Smarcb1-201ENSMUST00000000925 Gm28539A0A087WSL9 92 aa7□□□□□ -1.29
Smarcb1-201ENSMUST00000000925 Spint4Q9D263 159 aa6.99□□□□□ -1.29
Smarcb1-201ENSMUST00000000925 Ubr4A2AN08 5180 aa6.99□□□□□ -1.29
Smarcb1-201ENSMUST00000000925 Gm10160F6Y577 67 aa6.95□□□□□ -1.3
Smarcb1-201ENSMUST00000000925 Gm21798J3QNU5 87 aa6.93□□□□□ -1.3
Smarcb1-201ENSMUST00000000925 Crct1Q6PAI5 102 aa6.93□□□□□ -1.3
Smarcb1-201ENSMUST00000000925 9230102O04RikA2ASX7 82 aa6.91□□□□□ -1.3
Smarcb1-201ENSMUST00000000925 Gm17416Q30KP4 66 aa6.91□□□□□ -1.3
Smarcb1-201ENSMUST00000000925 4930507D05RikQ8C9C9 103 aa6.9□□□□□ -1.3
Smarcb1-201ENSMUST00000000925 4932415D10RikA0A1W2P6U8 4986 aa6.87□□□□□ -1.31
Smarcb1-201ENSMUST00000000925 Krtap1-3A2A588 173 aa6.87□□□□□ -1.31
Smarcb1-201ENSMUST00000000925 2310079G19RikQ9D6L6 185 aa6.86□□□□□ -1.31
Smarcb1-201ENSMUST00000000925 Fam229aB2KGE5 128 aa6.81□□□□□ -1.32
Smarcb1-201ENSMUST00000000925 Gm10643Q3URG9 111 aa6.81□□□□□ -1.32
Smarcb1-201ENSMUST00000000925 Krtap16-3Q8C1I6 86 aa6.81□□□□□ -1.32
Smarcb1-201ENSMUST00000000925 Coa5Q99M07 74 aa6.81□□□□□ -1.32
Smarcb1-201ENSMUST00000000925 Smlr1J3QMJ4 66 aa6.78□□□□□ -1.32
Smarcb1-201ENSMUST00000000925 Prr13Q9CQJ5 137 aa6.78□□□□□ -1.32
Smarcb1-201ENSMUST00000000925 Krtap19-1Q925H2 87 aa6.77□□□□□ -1.33
Smarcb1-201ENSMUST00000000925 Gm10318A0A1W2P728 225 aa6.76□□□□□ -1.33
Smarcb1-201ENSMUST00000000925 Krtap19-3Q925H6 87 aa6.76□□□□□ -1.33
Smarcb1-201ENSMUST00000000925 Defb1P56386 69 aa6.74□□□□□ -1.33
Smarcb1-201ENSMUST00000000925 ZanO88799 5376 aa6.71□□□□□ -1.33
Smarcb1-201ENSMUST00000000925 LorP18165 486 aa6.71□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 Pet100P0DJE0 76 aa6.7□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 SnurfQ9WU12 71 aa6.7□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 2210017I01RikA0A0A6YVV1 95 aa6.69□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 Tmem258P61166 79 aa6.69□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 Krtap13-1Q8K198 168 aa6.68□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 SptssbQ925E8 76 aa6.67□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 SvipQ3UZP4 77 aa6.66□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 1700042G07RikB1AUF7 90 aa6.65□□□□□ -1.34
Smarcb1-201ENSMUST00000000925 Gm19402J3QJV4 266 aa6.64□□□□□ -1.35
Smarcb1-201ENSMUST00000000925 Gm19935A0A1B0GSF9 52 aa6.62□□□□□ -1.35
Smarcb1-201ENSMUST00000000925 Pcp4P63054 62 aa6.61□□□□□ -1.35
Smarcb1-201ENSMUST00000000925 Fat4Q2PZL6 4981 aa6.6□□□□□ -1.35
Smarcb1-201ENSMUST00000000925 Smim20D3Z7Q2 69 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms