RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Unc80Q8BLN6 3261 aa8.06□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Eif4ebp3Q80VV3 101 aa8.06□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Prr13Q9CQJ5 137 aa8.06□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Zcchc13Q9D548 170 aa8.05□□□□□ -1.12
Col6a3-208ENSMUST00000188587 HttP42859 3119 aa8.04□□□□□ -1.12
Col6a3-208ENSMUST00000188587 MgaA2AWL7 3003 aaKnown RBP8.04□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Fam104aA2A6P4 185 aa8.03□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Chtf8P0CG14 533 aa8.03□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Vps13aQ5H8C4 3166 aa8.02□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Igsf10Q3V1M1 2594 aa8.02□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Tnrc18Q80WC3 2878 aa8.02□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Gm9955Q8CEJ8 102 aa8.02□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Itpr3P70227 2670 aa8□□□□□ -1.13
Col6a3-208ENSMUST00000188587 AtmQ62388 3066 aa8□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Chd6A3KFM7 2711 aa7.99□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Gm3233E9Q2H5 230 aa7.96□□□□□ -1.13
Col6a3-208ENSMUST00000188587 Cypt14J3QPF7 87 aa7.96□□□□□ -1.14
Col6a3-208ENSMUST00000188587 Gm3880A0A1B0GSB3 72 aa7.94□□□□□ -1.14
Col6a3-208ENSMUST00000188587 Gm4491E0CX42 125 aa7.94□□□□□ -1.14
Col6a3-208ENSMUST00000188587 NbdyA0A0N4SUI7 68 aa7.93□□□□□ -1.14
Col6a3-208ENSMUST00000188587 Mast4Q811L6 2618 aa7.93□□□□□ -1.14
Col6a3-208ENSMUST00000188587 FryE9Q8I9 3020 aa7.93□□□□□ -1.14
Col6a3-208ENSMUST00000188587 6030445D17RikE9Q8F9 148 aa7.92□□□□□ -1.14
Col6a3-208ENSMUST00000188587 9530053A07RikE9PVG8 2581 aa7.92□□□□□ -1.14
Col6a3-208ENSMUST00000188587 Tep1P97499 2629 aa7.92□□□□□ -1.14
Col6a3-208ENSMUST00000188587 Gm10065F6TJM2 114 aa7.91□□□□□ -1.14
Col6a3-208ENSMUST00000188587 Chd7A2AJK6 2986 aaKnown RBP7.9□□□□□ -1.15
Col6a3-208ENSMUST00000188587 Fam229aB2KGE5 128 aa7.88□□□□□ -1.15
Col6a3-208ENSMUST00000188587 Itpr2Q9Z329 2701 aa7.87□□□□□ -1.15
Col6a3-208ENSMUST00000188587 Krtap15-1Q9QZU5 150 aa7.87□□□□□ -1.15
Col6a3-208ENSMUST00000188587 Camk2n1Q6QWF9 78 aa7.86□□□□□ -1.15
Col6a3-208ENSMUST00000188587 BptfA2A654 3036 aaKnown RBP7.85□□□□□ -1.15
Col6a3-208ENSMUST00000188587 Zfhx3Q61329 3726 aa7.85□□□□□ -1.15
Col6a3-208ENSMUST00000188587 ApcQ61315 2845 aa7.83□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Itpr1P11881 2749 aa7.83□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Fbn2Q61555 2907 aa7.83□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Gm7138L7N2C3 230 aa7.81□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Gm3238W4VSP7 230 aa7.81□□□□□ -1.16
Col6a3-208ENSMUST00000188587 KalrnA2CG49 2964 aa7.81□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Col6a5A6H584 2640 aa7.81□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Nbeal2Q6ZQA0 2742 aa7.81□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Fam229bQ8CF36 80 aa7.8□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Wdfy4E9Q2M9 3149 aa7.8□□□□□ -1.16
Col6a3-208ENSMUST00000188587 Smim29Q8R043 75 aa7.8□□□□□ -1.16
Col6a3-208ENSMUST00000188587 DspE9Q557 2883 aaKnown RBP7.77□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Sec61bQ9CQS8 96 aaKnown RBP7.75□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Gm10320E9PW43 113 aa7.73□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Lama1P19137 3084 aa7.73□□□□□ -1.17
Col6a3-208ENSMUST00000188587 AspmQ8CJ27 3122 aa7.73□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Gm7137J3QMW1 236 aa7.73□□□□□ -1.17
Col6a3-208ENSMUST00000188587 FrylF8VQ05 3007 aa7.72□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Odf3bQ5M8M2 238 aa7.72□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Frem2Q6NVD0 3160 aa7.71□□□□□ -1.17
Col6a3-208ENSMUST00000188587 Szt2A2A9C3 3431 aa7.71□□□□□ -1.18
Col6a3-208ENSMUST00000188587 Brca2P97929 3329 aa7.69□□□□□ -1.18
Col6a3-208ENSMUST00000188587 Lrrc37aB1AWG4 3215 aa7.67□□□□□ -1.18
Col6a3-208ENSMUST00000188587 Utp20Q5XG71 2788 aaKnown RBP7.67□□□□□ -1.18
Col6a3-208ENSMUST00000188587 Stab2Q8R4U0 2559 aa7.66□□□□□ -1.18
Col6a3-208ENSMUST00000188587 Gm17349F7BGH6 99 aa7.65□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Ubr5Q80TP3 2792 aa7.64□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Myo15bI7HPW8 3033 aa7.63□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Gm10139O88245 57 aa7.63□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Celsr1O35161 3034 aa7.62□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Col6a3E9PWQ3 3284 aa7.62□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Dmxl2Q8BPN8 3032 aa7.62□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Gm11565A2A4M7 156 aa7.61□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Lelp1Q9DAE3 120 aa7.59□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Gm37013Q8K491 104 aa7.59□□□□□ -1.19
Col6a3-208ENSMUST00000188587 Tex15F8VPN2 2785 aa7.59□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Gm5767A0A0J9YTU8 78 aa7.58□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Gm19426M0QWC7 77 aa7.58□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Gm9508A0A1W2P7W0 230 aa7.57□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Pkd1l1Q8R526 2615 aa7.56□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Muc2Q80Z19 2680 aa7.55□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Sprr1aQ62266 144 aa7.55□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Igfn1Q3KNY0 2849 aa7.55□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Myo15aQ9QZZ4 3511 aa7.54□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Dchs2A0A0A6YW72 3346 aa7.54□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Krtap29-1A2A5X4 342 aa7.54□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Romo1P60603 79 aa7.53□□□□□ -1.2
Col6a3-208ENSMUST00000188587 BC029722A0A0N4SW31 51 aa7.53□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Gm16253D3Z167 63 aa7.53□□□□□ -1.2
Col6a3-208ENSMUST00000188587 Rpl37Q9D823 97 aa7.52□□□□□ -1.21
Col6a3-208ENSMUST00000188587 Akap9Q70FJ1 3797 aa7.52□□□□□ -1.21
Col6a3-208ENSMUST00000188587 Adgrg4B7ZCC9 3073 aa7.51□□□□□ -1.21
Col6a3-208ENSMUST00000188587 Vps13cQ8BX70 3748 aa7.48□□□□□ -1.21
Col6a3-208ENSMUST00000188587 Gm36176A0A1W2P8D5 158 aa7.48□□□□□ -1.21
Col6a3-208ENSMUST00000188587 Dchs1E9PVD3 3291 aa7.47□□□□□ -1.21
Col6a3-208ENSMUST00000188587 NbeaQ9EPN1 2936 aa7.46□□□□□ -1.22
Col6a3-208ENSMUST00000188587 Zzef1Q5SSH7 2924 aa7.44□□□□□ -1.22
Col6a3-208ENSMUST00000188587 SpegQ62407 3262 aa7.43□□□□□ -1.22
Col6a3-208ENSMUST00000188587 Gm10382Q3V0T5 144 aa7.42□□□□□ -1.22
Col6a3-208ENSMUST00000188587 Srrm2Q8BTI8 2703 aaKnown RBP7.42□□□□□ -1.22
Col6a3-208ENSMUST00000188587 VcanQ62059 3357 aa7.41□□□□□ -1.22
Col6a3-208ENSMUST00000188587 Trank1Q8BV79 2999 aa7.39□□□□□ -1.23
Col6a3-208ENSMUST00000188587 Gm3646F6S692 53 aa7.37□□□□□ -1.23
Col6a3-208ENSMUST00000188587 Cystm1Q8K353 104 aa7.37□□□□□ -1.23
Col6a3-208ENSMUST00000188587 A730071L15RikQ8C4X0 137 aa7.36□□□□□ -1.23
Col6a3-208ENSMUST00000188587 Chd9Q8BYH8 2885 aa7.32□□□□□ -1.24
Col6a3-208ENSMUST00000188587 2310050C09RikG5E8Z3 280 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms