RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm17349F7BGH6 99 aa6.95□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Cypt14J3QPF7 87 aa6.95□□□□□ -1.3
Scn8a-203ENSMUST00000108908 2310034C09RikQ9D746 214 aa6.95□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Ankrd11E9Q4F7 2643 aa6.93□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Usp9yF8VPU6 2556 aa6.93□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Map1aQ9QYR6 2776 aa6.92□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Gcn1E9PVA8 2671 aaKnown RBP6.92□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Gm10320E9PW43 113 aa6.92□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Myo18bE9PV66 2605 aa6.92□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Gm9821Q8K076 103 aa6.91□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Gm10065F6TJM2 114 aa6.91□□□□□ -1.3
Scn8a-203ENSMUST00000108908 Zfhx3Q61329 3726 aa6.9□□□□□ -1.3
Scn8a-203ENSMUST00000108908 HrnrQ8VHD8 2496 aa6.89□□□□□ -1.31
Scn8a-203ENSMUST00000108908 6030445D17RikE9Q8F9 148 aa6.88□□□□□ -1.31
Scn8a-203ENSMUST00000108908 Gm21798J3QNU5 87 aa6.87□□□□□ -1.31
Scn8a-203ENSMUST00000108908 BptfA2A654 3036 aaKnown RBP6.87□□□□□ -1.31
Scn8a-203ENSMUST00000108908 Ash1lQ99MY8 2958 aa6.87□□□□□ -1.31
Scn8a-203ENSMUST00000108908 FrylF8VQ05 3007 aa6.86□□□□□ -1.31
Scn8a-203ENSMUST00000108908 AtrQ9JKK8 2635 aa6.86□□□□□ -1.31
Scn8a-203ENSMUST00000108908 Gm4491E0CX42 125 aa6.85□□□□□ -1.31
Scn8a-203ENSMUST00000108908 Pla2g10Q9QXX3 151 aa6.84□□□□□ -1.31
Scn8a-203ENSMUST00000108908 Fbn2Q61555 2907 aa6.83□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Brca2P97929 3329 aa6.83□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Col6a3E9PWQ3 3284 aa6.81□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Gm10139O88245 57 aa6.81□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Odf3bQ5M8M2 238 aa6.81□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Sprr1aQ62266 144 aa6.79□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Hectd1Q69ZR2 2618 aaKnown RBP6.79□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Krtap15-1Q9QZU5 150 aa6.78□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Gm3880A0A1B0GSB3 72 aa6.78□□□□□ -1.32
Scn8a-203ENSMUST00000108908 Spink7Q6IE32 76 aa6.78□□□□□ -1.32
Scn8a-203ENSMUST00000108908 KalrnA2CG49 2964 aa6.77□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Lrrc37aB1AWG4 3215 aa6.77□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Gm10643Q3URG9 111 aa6.76□□□□□ -1.33
Scn8a-203ENSMUST00000108908 AspmQ8CJ27 3122 aa6.76□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Lama1P19137 3084 aa6.75□□□□□ -1.33
Scn8a-203ENSMUST00000108908 NipblQ6KCD5 2798 aaKnown RBP6.75□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Cystm1Q8K353 104 aa6.74□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Myo15aQ9QZZ4 3511 aa6.73□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Gm9507D3Z5T3 223 aa6.72□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Gm9955Q8CEJ8 102 aa6.72□□□□□ -1.33
Scn8a-203ENSMUST00000108908 Gm20538F6Z9R1 75 aa6.72□□□□□ -1.33
Scn8a-203ENSMUST00000108908 CriptO70333 101 aa6.72□□□□□ -1.33
Scn8a-203ENSMUST00000108908 FlnbQ80X90 2602 aaKnown RBP6.71□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Celsr1O35161 3034 aa6.71□□□□□ -1.34
Scn8a-203ENSMUST00000108908 FasnP19096 2504 aaKnown RBP6.7□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Dchs2A0A0A6YW72 3346 aa6.7□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Wdfy3Q6VNB8 3508 aa6.69□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Kmt2bO08550 2713 aa6.68□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Krtap29-1A2A5X4 342 aa6.68□□□□□ -1.34
Scn8a-203ENSMUST00000108908 A730071L15RikQ8C4X0 137 aa6.68□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Chd6A3KFM7 2711 aa6.67□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Wdfy4E9Q2M9 3149 aa6.67□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Gm37013Q8K491 104 aa6.67□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Myo15bI7HPW8 3033 aa6.66□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Fn1P11276 2477 aaKnown RBP6.66□□□□□ -1.34
Scn8a-203ENSMUST00000108908 VcanQ62059 3357 aa6.66□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Vps13cQ8BX70 3748 aa6.65□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Dchs1E9PVD3 3291 aa6.65□□□□□ -1.34
Scn8a-203ENSMUST00000108908 Adgrg4B7ZCC9 3073 aa6.64□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Itpr3P70227 2670 aa6.63□□□□□ -1.35
Scn8a-203ENSMUST00000108908 FryE9Q8I9 3020 aa6.63□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Gm16253D3Z167 63 aa6.62□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Notch1Q01705 2531 aa6.61□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Krtap13O88375 197 aa6.6□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Krtap10-4Q08EG8 221 aa6.6□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Itpr1P11881 2749 aa6.6□□□□□ -1.35
Scn8a-203ENSMUST00000108908 SpegQ62407 3262 aa6.59□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Akap13E9Q394 2776 aa6.59□□□□□ -1.35
Scn8a-203ENSMUST00000108908 Stab1Q8R4Y4 2571 aa6.58□□□□□ -1.36
Scn8a-203ENSMUST00000108908 Fam229aB2KGE5 128 aa6.55□□□□□ -1.36
Scn8a-203ENSMUST00000108908 2310050C09RikG5E8Z3 280 aa6.55□□□□□ -1.36
Scn8a-203ENSMUST00000108908 Utp20Q5XG71 2788 aaKnown RBP6.53□□□□□ -1.36
Scn8a-203ENSMUST00000108908 Dmxl2Q8BPN8 3032 aa6.51□□□□□ -1.37
Scn8a-203ENSMUST00000108908 Gm5767A0A0J9YTU8 78 aa6.5□□□□□ -1.37
Scn8a-203ENSMUST00000108908 Igsf10Q3V1M1 2594 aa6.49□□□□□ -1.37
Scn8a-203ENSMUST00000108908 Krtap10-10A0A1W2P7T6 217 aa6.49□□□□□ -1.37
Scn8a-203ENSMUST00000108908 Akap9Q70FJ1 3797 aa6.48□□□□□ -1.37
Scn8a-203ENSMUST00000108908 Sec61bQ9CQS8 96 aaKnown RBP6.48□□□□□ -1.37
Scn8a-203ENSMUST00000108908 Camk2n1Q6QWF9 78 aa6.47□□□□□ -1.37
Scn8a-203ENSMUST00000108908 DmdP11531 3678 aa6.45□□□□□ -1.38
Scn8a-203ENSMUST00000108908 NbeaQ9EPN1 2936 aa6.45□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Mast4Q811L6 2618 aa6.45□□□□□ -1.38
Scn8a-203ENSMUST00000108908 2310061N02RikQ9D6S9 174 aa6.45□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Krtap14O08640 167 aa6.44□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Itpr2Q9Z329 2701 aa6.44□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Tep1P97499 2629 aa6.41□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Gm3646F6S692 53 aa6.41□□□□□ -1.38
Scn8a-203ENSMUST00000108908 RelnQ60841 3461 aa6.41□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Csmd1Q923L3 3564 aa6.41□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Nbeal2Q6ZQA0 2742 aa6.4□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Muc2Q80Z19 2680 aa6.4□□□□□ -1.38
Scn8a-203ENSMUST00000108908 Ubr5Q80TP3 2792 aa6.39□□□□□ -1.39
Scn8a-203ENSMUST00000108908 Gm2696A0A1W2P709 240 aa6.35□□□□□ -1.39
Scn8a-203ENSMUST00000108908 Gm19426M0QWC7 77 aa6.35□□□□□ -1.39
Scn8a-203ENSMUST00000108908 Gm2310J3QNJ2 377 aa6.34□□□□□ -1.39
Scn8a-203ENSMUST00000108908 DspE9Q557 2883 aaKnown RBP6.34□□□□□ -1.39
Scn8a-203ENSMUST00000108908 Rpl37Q9D823 97 aa6.34□□□□□ -1.39
Scn8a-203ENSMUST00000108908 BC029722A0A0N4SW31 51 aa6.32□□□□□ -1.4
Scn8a-203ENSMUST00000108908 Romo1P60603 79 aa6.32□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms