RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Col5a1O88207 1838 aa7.07□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Plac8Q9JI48 112 aa7.07□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Dmbt1Q60997 2085 aa7.07□□□□□ -1.28
Rtn3-202ENSMUST00000065304 VcanQ62059 3357 aa7.06□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Gm10065F6TJM2 114 aa7.06□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Col6a3E9PWQ3 3284 aa7.06□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Mki67E9PVX6 3177 aaKnown RBP7.05□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Muc5acE9QAQ8 3455 aa7.05□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Ranbp2Q9ERU9 3053 aaKnown RBP7.04□□□□□ -1.28
Rtn3-202ENSMUST00000065304 AspmQ8CJ27 3122 aa7.04□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Kmt2bO08550 2713 aa7.03□□□□□ -1.28
Rtn3-202ENSMUST00000065304 Usp24B1AY13 2617 aaKnown RBP7.02□□□□□ -1.29
Rtn3-202ENSMUST00000065304 1700042G07RikB1AUF7 90 aa7.01□□□□□ -1.29
Rtn3-202ENSMUST00000065304 Gm10382Q3V0T5 144 aa7.01□□□□□ -1.29
Rtn3-202ENSMUST00000065304 FryE9Q8I9 3020 aa7.01□□□□□ -1.29
Rtn3-202ENSMUST00000065304 Dchs1E9PVD3 3291 aa7□□□□□ -1.29
Rtn3-202ENSMUST00000065304 Sec61bQ9CQS8 96 aaKnown RBP6.98□□□□□ -1.29
Rtn3-202ENSMUST00000065304 BC029722A0A0N4SW31 51 aa6.97□□□□□ -1.29
Rtn3-202ENSMUST00000065304 Dmxl1Q6PNC0 3013 aa6.95□□□□□ -1.3
Rtn3-202ENSMUST00000065304 Pcsk5Q04592 1877 aa6.95□□□□□ -1.3
Rtn3-202ENSMUST00000065304 CenpfE9Q3P4 2997 aaKnown RBP6.94□□□□□ -1.3
Rtn3-202ENSMUST00000065304 Lrrc37aB1AWG4 3215 aa6.94□□□□□ -1.3
Rtn3-202ENSMUST00000065304 Cox6b2Q80ZN9 88 aa6.93□□□□□ -1.3
Rtn3-202ENSMUST00000065304 Krtap15-1Q9QZU5 150 aa6.92□□□□□ -1.3
Rtn3-202ENSMUST00000065304 Ndufaf8A2AMZ4 74 aa6.9□□□□□ -1.31
Rtn3-202ENSMUST00000065304 PcntP48725 2898 aa6.9□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Gm19426M0QWC7 77 aa6.89□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Abca12E9Q876 2595 aa6.89□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Csmd1Q923L3 3564 aa6.89□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Gm10320E9PW43 113 aa6.89□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Gm3250E9Q1M3 230 aa6.89□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Gm16253D3Z167 63 aa6.88□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Gm10139O88245 57 aa6.88□□□□□ -1.31
Rtn3-202ENSMUST00000065304 FrylF8VQ05 3007 aa6.86□□□□□ -1.31
Rtn3-202ENSMUST00000065304 4933415A04RikQ9D443 101 aa6.84□□□□□ -1.31
Rtn3-202ENSMUST00000065304 Gm3285A0A1W2P7U0 201 aa6.83□□□□□ -1.32
Rtn3-202ENSMUST00000065304 FlnbQ80X90 2602 aaKnown RBP6.83□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Bod1lE9Q6J5 3032 aa6.81□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Nsd1O88491 2588 aaKnown RBP6.8□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Vps13cQ8BX70 3748 aa6.8□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Celsr3Q91ZI0 3301 aa6.79□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Cystm1Q8K353 104 aa6.79□□□□□ -1.32
Rtn3-202ENSMUST00000065304 TrioQ0KL02 3102 aa6.79□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Notch1Q01705 2531 aa6.78□□□□□ -1.32
Rtn3-202ENSMUST00000065304 Lama1P19137 3084 aa6.77□□□□□ -1.33
Rtn3-202ENSMUST00000065304 Gm5767A0A0J9YTU8 78 aa6.77□□□□□ -1.33
Rtn3-202ENSMUST00000065304 2310050C09RikG5E8Z3 280 aa6.76□□□□□ -1.33
Rtn3-202ENSMUST00000065304 Ankrd17Q99NH0 2603 aaKnown RBP6.76□□□□□ -1.33
Rtn3-202ENSMUST00000065304 Celsr1O35161 3034 aa6.76□□□□□ -1.33
Rtn3-202ENSMUST00000065304 Gm9112A2AI92 75 aa6.75□□□□□ -1.33
Rtn3-202ENSMUST00000065304 AtrQ9JKK8 2635 aa6.74□□□□□ -1.33
Rtn3-202ENSMUST00000065304 Prune2Q52KR3 3084 aa6.72□□□□□ -1.33
Rtn3-202ENSMUST00000065304 Tnrc18Q80WC3 2878 aa6.71□□□□□ -1.34
Rtn3-202ENSMUST00000065304 Cmya5Q70KF4 3739 aa6.7□□□□□ -1.34
Rtn3-202ENSMUST00000065304 Sprr1aQ62266 144 aa6.69□□□□□ -1.34
Rtn3-202ENSMUST00000065304 A730071L15RikQ8C4X0 137 aa6.68□□□□□ -1.34
Rtn3-202ENSMUST00000065304 Zfhx4Q9JJN2 3550 aa6.68□□□□□ -1.34
Rtn3-202ENSMUST00000065304 Chd7A2AJK6 2986 aaKnown RBP6.67□□□□□ -1.34
Rtn3-202ENSMUST00000065304 Akap13E9Q394 2776 aa6.66□□□□□ -1.34
Rtn3-202ENSMUST00000065304 AtmQ62388 3066 aa6.65□□□□□ -1.35
Rtn3-202ENSMUST00000065304 RelnQ60841 3461 aa6.64□□□□□ -1.35
Rtn3-202ENSMUST00000065304 Igsf10Q3V1M1 2594 aa6.64□□□□□ -1.35
Rtn3-202ENSMUST00000065304 Gm40193A0A1B0GT39 78 aa6.62□□□□□ -1.35
Rtn3-202ENSMUST00000065304 Mast4Q811L6 2618 aa6.62□□□□□ -1.35
Rtn3-202ENSMUST00000065304 Gm7173A0A0G2JEB6 3132 aa6.61□□□□□ -1.35
Rtn3-202ENSMUST00000065304 Tnp1P10856 55 aa6.58□□□□□ -1.36
Rtn3-202ENSMUST00000065304 MgaA2AWL7 3003 aaKnown RBP6.57□□□□□ -1.36
Rtn3-202ENSMUST00000065304 Gm11565A2A4M7 156 aa6.56□□□□□ -1.36
Rtn3-202ENSMUST00000065304 KalrnA2CG49 2964 aa6.56□□□□□ -1.36
Rtn3-202ENSMUST00000065304 Stab1Q8R4Y4 2571 aa6.56□□□□□ -1.36
Rtn3-202ENSMUST00000065304 9530053A07RikE9PVG8 2581 aa6.56□□□□□ -1.36
Rtn3-202ENSMUST00000065304 Lama5Q61001 3718 aa6.55□□□□□ -1.36
Rtn3-202ENSMUST00000065304 Hectd1Q69ZR2 2618 aaKnown RBP6.53□□□□□ -1.36
Rtn3-202ENSMUST00000065304 Muc4Q8JZM8 3443 aa6.53□□□□□ -1.36
Rtn3-202ENSMUST00000065304 Gm21887J3QQ04 176 aa6.52□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Rev3lQ61493 3122 aa6.52□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Rps29P62274 56 aa6.51□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Col12a1Q60847 3120 aa6.51□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Krtap13O88375 197 aa6.5□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Smg1Q8BKX6 3658 aaKnown RBP6.5□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Krtap29-1A2A5X4 342 aa6.49□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Gm3233E9Q2H5 230 aa6.47□□□□□ -1.37
Rtn3-202ENSMUST00000065304 Krtap14O08640 167 aa6.46□□□□□ -1.38
Rtn3-202ENSMUST00000065304 Gm2310J3QNJ2 377 aa6.45□□□□□ -1.38
Rtn3-202ENSMUST00000065304 Gcn1E9PVA8 2671 aaKnown RBP6.42□□□□□ -1.38
Rtn3-202ENSMUST00000065304 Chd6A3KFM7 2711 aa6.41□□□□□ -1.38
Rtn3-202ENSMUST00000065304 FlnaQ8BTM8 2647 aaKnown RBP6.4□□□□□ -1.38
Rtn3-202ENSMUST00000065304 Gm17349F7BGH6 99 aa6.4□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Gm9508A0A1W2P7W0 230 aa6.39□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Gm7138L7N2C3 230 aa6.39□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Gm3238W4VSP7 230 aa6.39□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Map1aQ9QYR6 2776 aa6.38□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Zzef1Q5SSH7 2924 aa6.38□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Wdfy4E9Q2M9 3149 aa6.37□□□□□ -1.39
Rtn3-202ENSMUST00000065304 D6Ertd527eA0A0N4SWI3 464 aa6.34□□□□□ -1.39
Rtn3-202ENSMUST00000065304 LystP97412 3788 aa6.34□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Tep1P97499 2629 aa6.34□□□□□ -1.39
Rtn3-202ENSMUST00000065304 Csmd2V9GX34 3611 aa6.32□□□□□ -1.4
Rtn3-202ENSMUST00000065304 Lelp1Q9DAE3 120 aa6.31□□□□□ -1.4
Rtn3-202ENSMUST00000065304 NbeaQ9EPN1 2936 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms