RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Col12a1Q60847 3120 aa10.91□□□□□ -0.66
Pcdhac2-201ENSMUST00000047479 Gm3880A0A1B0GSB3 72 aa10.9□□□□□ -0.66
Pcdhac2-201ENSMUST00000047479 Krtap15-1Q9QZU5 150 aa10.89□□□□□ -0.67
Pcdhac2-201ENSMUST00000047479 Gm9508A0A1W2P7W0 230 aa10.86□□□□□ -0.67
Pcdhac2-201ENSMUST00000047479 Gcn1E9PVA8 2671 aaKnown RBP10.85□□□□□ -0.67
Pcdhac2-201ENSMUST00000047479 Gm10320E9PW43 113 aa10.85□□□□□ -0.67
Pcdhac2-201ENSMUST00000047479 Odf3bQ5M8M2 238 aa10.84□□□□□ -0.67
Pcdhac2-201ENSMUST00000047479 Gm36176A0A1W2P8D5 158 aa10.83□□□□□ -0.68
Pcdhac2-201ENSMUST00000047479 Gm10139O88245 57 aa10.81□□□□□ -0.68
Pcdhac2-201ENSMUST00000047479 Hectd1Q69ZR2 2618 aaKnown RBP10.81□□□□□ -0.68
Pcdhac2-201ENSMUST00000047479 Gm9195A0A140LHT4 2805 aa10.8□□□□□ -0.68
Pcdhac2-201ENSMUST00000047479 HttP42859 3119 aa10.77□□□□□ -0.68
Pcdhac2-201ENSMUST00000047479 Fam229aB2KGE5 128 aa10.77□□□□□ -0.69
Pcdhac2-201ENSMUST00000047479 Sprr1aQ62266 144 aa10.75□□□□□ -0.69
Pcdhac2-201ENSMUST00000047479 HrnrQ8VHD8 2496 aa10.73□□□□□ -0.69
Pcdhac2-201ENSMUST00000047479 Notch1Q01705 2531 aa10.73□□□□□ -0.69
Pcdhac2-201ENSMUST00000047479 Cdh23Q99PF4 3354 aa10.72□□□□□ -0.69
Pcdhac2-201ENSMUST00000047479 Bod1lE9Q6J5 3032 aa10.68□□□□□ -0.7
Pcdhac2-201ENSMUST00000047479 Rev3lQ61493 3122 aa10.68□□□□□ -0.7
Pcdhac2-201ENSMUST00000047479 Stab1Q8R4Y4 2571 aa10.67□□□□□ -0.7
Pcdhac2-201ENSMUST00000047479 Chd7A2AJK6 2986 aaKnown RBP10.65□□□□□ -0.7
Pcdhac2-201ENSMUST00000047479 Sec61bQ9CQS8 96 aaKnown RBP10.64□□□□□ -0.71
Pcdhac2-201ENSMUST00000047479 Camk2n1Q6QWF9 78 aa10.64□□□□□ -0.71
Pcdhac2-201ENSMUST00000047479 Akap13E9Q394 2776 aa10.63□□□□□ -0.71
Pcdhac2-201ENSMUST00000047479 Gm16253D3Z167 63 aa10.62□□□□□ -0.71
Pcdhac2-201ENSMUST00000047479 Tnrc18Q80WC3 2878 aa10.62□□□□□ -0.71
Pcdhac2-201ENSMUST00000047479 Gm37013Q8K491 104 aa10.56□□□□□ -0.72
Pcdhac2-201ENSMUST00000047479 Krtap29-1A2A5X4 342 aa10.54□□□□□ -0.72
Pcdhac2-201ENSMUST00000047479 Kmt2bO08550 2713 aa10.51□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Gm5767A0A0J9YTU8 78 aa10.51□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Mast4Q811L6 2618 aa10.51□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Cystm1Q8K353 104 aa10.48□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Cfap54Q8C6S9 3106 aa10.48□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Vps13aQ5H8C4 3166 aa10.47□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Myo15bI7HPW8 3033 aa10.47□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Krtap13O88375 197 aa10.46□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Itpr1P11881 2749 aa10.46□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Ranbp2Q9ERU9 3053 aaKnown RBP10.46□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Prrc2cQ3TLH4 2846 aaKnown RBP10.46□□□□□ -0.73
Pcdhac2-201ENSMUST00000047479 Szt2A2A9C3 3431 aa10.45□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 AtmQ62388 3066 aa10.45□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 A730071L15RikQ8C4X0 137 aa10.45□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 Igsf10Q3V1M1 2594 aa10.45□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 Gm9507D3Z5T3 223 aa10.42□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 2310050C09RikG5E8Z3 280 aa10.4□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 NipblQ6KCD5 2798 aaKnown RBP10.4□□□□□ -0.74
Pcdhac2-201ENSMUST00000047479 Gm19426M0QWC7 77 aa10.39□□□□□ -0.75
Pcdhac2-201ENSMUST00000047479 Itpr3P70227 2670 aa10.39□□□□□ -0.75
Pcdhac2-201ENSMUST00000047479 Dmxl1Q6PNC0 3013 aa10.39□□□□□ -0.75
Pcdhac2-201ENSMUST00000047479 Fbn2Q61555 2907 aa10.36□□□□□ -0.75
Pcdhac2-201ENSMUST00000047479 MgaA2AWL7 3003 aaKnown RBP10.35□□□□□ -0.75
Pcdhac2-201ENSMUST00000047479 BC029722A0A0N4SW31 51 aa10.34□□□□□ -0.75
Pcdhac2-201ENSMUST00000047479 Rpl37Q9D823 97 aa10.33□□□□□ -0.76
Pcdhac2-201ENSMUST00000047479 KalrnA2CG49 2964 aa10.32□□□□□ -0.76
Pcdhac2-201ENSMUST00000047479 Ash1lQ99MY8 2958 aa10.32□□□□□ -0.76
Pcdhac2-201ENSMUST00000047479 9530053A07RikE9PVG8 2581 aa10.31□□□□□ -0.76
Pcdhac2-201ENSMUST00000047479 Ubr5Q80TP3 2792 aa10.28□□□□□ -0.76
Pcdhac2-201ENSMUST00000047479 Unc80Q8BLN6 3261 aa10.27□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Krtap10-4Q08EG8 221 aa10.26□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Map1aQ9QYR6 2776 aa10.25□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Gm3646F6S692 53 aa10.25□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Chd6A3KFM7 2711 aa10.24□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Tep1P97499 2629 aa10.24□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Romo1P60603 79 aa10.23□□□□□ -0.77
Pcdhac2-201ENSMUST00000047479 Lrrc37aB1AWG4 3215 aa10.2□□□□□ -0.78
Pcdhac2-201ENSMUST00000047479 AspmQ8CJ27 3122 aa10.2□□□□□ -0.78
Pcdhac2-201ENSMUST00000047479 Krtap14O08640 167 aa10.19□□□□□ -0.78
Pcdhac2-201ENSMUST00000047479 Nbeal2Q6ZQA0 2742 aa10.15□□□□□ -0.78
Pcdhac2-201ENSMUST00000047479 Krtap10-10A0A1W2P7T6 217 aa10.14□□□□□ -0.79
Pcdhac2-201ENSMUST00000047479 2310061N02RikQ9D6S9 174 aa10.13□□□□□ -0.79
Pcdhac2-201ENSMUST00000047479 Celsr3Q91ZI0 3301 aa10.12□□□□□ -0.79
Pcdhac2-201ENSMUST00000047479 Gm10382Q3V0T5 144 aa10.12□□□□□ -0.79
Pcdhac2-201ENSMUST00000047479 Stab2Q8R4U0 2559 aa10.1□□□□□ -0.79
Pcdhac2-201ENSMUST00000047479 BptfA2A654 3036 aaKnown RBP10.09□□□□□ -0.79
Pcdhac2-201ENSMUST00000047479 Pkd1l1Q8R526 2615 aa10.06□□□□□ -0.8
Pcdhac2-201ENSMUST00000047479 Rps29P62274 56 aa10.05□□□□□ -0.8
Pcdhac2-201ENSMUST00000047479 Frem2Q6NVD0 3160 aa10.01□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 Celsr1O35161 3034 aa10.01□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 Col6a3E9PWQ3 3284 aa10□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 FrylF8VQ05 3007 aa9.99□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 Gm2310J3QNJ2 377 aa9.99□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 Brca2P97929 3329 aa9.98□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 Tnp2P11378 117 aa9.96□□□□□ -0.81
Pcdhac2-201ENSMUST00000047479 Col6a5A6H584 2640 aa9.94□□□□□ -0.82
Pcdhac2-201ENSMUST00000047479 Lama1P19137 3084 aa9.93□□□□□ -0.82
Pcdhac2-201ENSMUST00000047479 Muc2Q80Z19 2680 aa9.89□□□□□ -0.83
Pcdhac2-201ENSMUST00000047479 4933415A04RikQ9D443 101 aa9.88□□□□□ -0.83
Pcdhac2-201ENSMUST00000047479 Gm2696A0A1W2P709 240 aa9.87□□□□□ -0.83
Pcdhac2-201ENSMUST00000047479 Cox6b2Q80ZN9 88 aa9.87□□□□□ -0.83
Pcdhac2-201ENSMUST00000047479 Wdfy4E9Q2M9 3149 aa9.86□□□□□ -0.83
Pcdhac2-201ENSMUST00000047479 FryE9Q8I9 3020 aa9.81□□□□□ -0.84
Pcdhac2-201ENSMUST00000047479 Hivep1Q03172 2688 aa9.8□□□□□ -0.84
Pcdhac2-201ENSMUST00000047479 FcgbpE9Q0B5 2583 aa9.78□□□□□ -0.84
Pcdhac2-201ENSMUST00000047479 1700042G07RikB1AUF7 90 aa9.77□□□□□ -0.84
Pcdhac2-201ENSMUST00000047479 Itpr2Q9Z329 2701 aa9.77□□□□□ -0.85
Pcdhac2-201ENSMUST00000047479 Adgrg4B7ZCC9 3073 aa9.77□□□□□ -0.85
Pcdhac2-201ENSMUST00000047479 VcanQ62059 3357 aa9.76□□□□□ -0.85
Pcdhac2-201ENSMUST00000047479 Dmxl2Q8BPN8 3032 aa9.73□□□□□ -0.85
Pcdhac2-201ENSMUST00000047479 Dchs2A0A0A6YW72 3346 aa9.72□□□□□ -0.85
Pcdhac2-201ENSMUST00000047479 NbeaQ9EPN1 2936 aa9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 105.3 ms