RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Rhox8Q6VSS7 320 aa31,49■■■□□ 2,63
Pcdhac2-201ENSMUST00000047479 Ehmt2Q9Z148 1263 aaKnown RBP28,03■■■□□ 2,08
Pcdhac2-201ENSMUST00000047479 Rpgrip1Q9EPQ2 1331 aa27,96■■■□□ 2,07
Pcdhac2-201ENSMUST00000047479 Esf1Q3V1V3 845 aaKnown RBP27,92■■■□□ 2,06
Pcdhac2-201ENSMUST00000047479 Ccdc136Q3TVA9 1136 aa27,84■■■□□ 2,05
Pcdhac2-201ENSMUST00000047479 Cngb1E1AZ71 1325 aa27,79■■■□□ 2,04
Pcdhac2-201ENSMUST00000047479 Ube2uB1AUC4 352 aa27,57■■■□□ 2
Pcdhac2-201ENSMUST00000047479 Zeb1Q64318 1117 aa27,5■■□□□ 1,99
Pcdhac2-201ENSMUST00000047479 Wdr66E9Q743 1299 aa27,4■■□□□ 1,98
Pcdhac2-201ENSMUST00000047479 Las1lA2BE28 776 aaKnown RBP27,38■■□□□ 1,97
Pcdhac2-201ENSMUST00000047479 Gab3Q8BSM5 595 aa27,35■■□□□ 1,97
Pcdhac2-201ENSMUST00000047479 Npm2Q80W85 207 aa27,3■■□□□ 1,96
Pcdhac2-201ENSMUST00000047479 Trim41Q5NCC3 630 aa27,19■■□□□ 1,94
Pcdhac2-201ENSMUST00000047479 Myt1lP97500 1187 aa27,03■■□□□ 1,92
Pcdhac2-201ENSMUST00000047479 Pelp1Q9DBD5 1123 aaKnown RBP26,79■■□□□ 1,88
Pcdhac2-201ENSMUST00000047479 NischQ80TM9 1593 aa26,71■■□□□ 1,87
Pcdhac2-201ENSMUST00000047479 UbtfP25976 765 aaKnown RBP26,29■■□□□ 1,8
Pcdhac2-201ENSMUST00000047479 Il27Q8K3I6 234 aa26,18■■□□□ 1,78
Pcdhac2-201ENSMUST00000047479 Slc24a1Q91WD8 1130 aa26,01■■□□□ 1,75
Pcdhac2-201ENSMUST00000047479 NefmP08553 848 aa26■■□□□ 1,75
Pcdhac2-201ENSMUST00000047479 Stra8P70278 393 aa25,91■■□□□ 1,74
Pcdhac2-201ENSMUST00000047479 Acin1Q9JIX8 1338 aaKnown RBP25,83■■□□□ 1,73
Pcdhac2-201ENSMUST00000047479 CenpbP27790 599 aa25,74■■□□□ 1,71
Pcdhac2-201ENSMUST00000047479 Amer1Q7TS75 1132 aa25,7■■□□□ 1,7
Pcdhac2-201ENSMUST00000047479 Ap3b1Q9Z1T1 1105 aa25,67■■□□□ 1,7
Pcdhac2-201ENSMUST00000047479 Fam50aQ9WV03 339 aaKnown RBP25,61■■□□□ 1,69
Pcdhac2-201ENSMUST00000047479 Neurod1Q60867 357 aa25,55■■□□□ 1,68
Pcdhac2-201ENSMUST00000047479 Os9Q8K2C7 672 aa25,51■■□□□ 1,67
Pcdhac2-201ENSMUST00000047479 HrcG5E8J6 738 aa25,5■■□□□ 1,67
Pcdhac2-201ENSMUST00000047479 Zcchc6Q5BLK4 1491 aaKnown RBP25,49■■□□□ 1,67
Pcdhac2-201ENSMUST00000047479 Abcc9P70170 1546 aa25,47■■□□□ 1,67
Pcdhac2-201ENSMUST00000047479 Anp32bQ9EST5 272 aaKnown RBP25,46■■□□□ 1,67
Pcdhac2-201ENSMUST00000047479 Ccdc180J3QNE4 1664 aa25,41■■□□□ 1,66
Pcdhac2-201ENSMUST00000047479 NrdcQ8BHG1 1161 aa25,4■■□□□ 1,66
Pcdhac2-201ENSMUST00000047479 NclP09405 707 aaKnown RBP25,36■■□□□ 1,65
Pcdhac2-201ENSMUST00000047479 Gm35339A0A140LHH9 1649 aa25,29■■□□□ 1,64
Pcdhac2-201ENSMUST00000047479 Cdk11bP24788 784 aaKnown RBP25,29■■□□□ 1,64
Pcdhac2-201ENSMUST00000047479 NeflP08551 543 aa25,15■■□□□ 1,62
Pcdhac2-201ENSMUST00000047479 Eif5bQ05D44 1216 aaKnown RBP25,12■■□□□ 1,61
Pcdhac2-201ENSMUST00000047479 Ppargc1bQ8VHJ7 1014 aa25,04■■□□□ 1,6
Pcdhac2-201ENSMUST00000047479 Npm1Q61937 292 aaKnown RBP25,03■■□□□ 1,6
Pcdhac2-201ENSMUST00000047479 Zbtb7cQ8VCZ7 619 aa25,03■■□□□ 1,6
Pcdhac2-201ENSMUST00000047479 Rtl1Q7M732 1744 aa24,99■■□□□ 1,59
Pcdhac2-201ENSMUST00000047479 Nop58Q6DFW4 536 aaKnown RBP24,97■■□□□ 1,59
Pcdhac2-201ENSMUST00000047479 Tnnt3Q9QZ47 272 aa24,96■■□□□ 1,59
Pcdhac2-201ENSMUST00000047479 Ttbk1Q6PCN3 1308 aa24,96■■□□□ 1,59
Pcdhac2-201ENSMUST00000047479 TonslQ6NZL6 1363 aa24,92■■□□□ 1,58
Pcdhac2-201ENSMUST00000047479 Gm13697A2AK42 830 aa24,91■■□□□ 1,58
Pcdhac2-201ENSMUST00000047479 4933416C03RikQ3V063 378 aa24,9■■□□□ 1,58
Pcdhac2-201ENSMUST00000047479 Hnrnpul2Q00PI9 745 aaKnown RBP24,88■■□□□ 1,57
Pcdhac2-201ENSMUST00000047479 Lmod2Q3UHZ5 550 aa24,88■■□□□ 1,57
Pcdhac2-201ENSMUST00000047479 Ifnlr1Q8CGK5 535 aa24,87■■□□□ 1,57
Pcdhac2-201ENSMUST00000047479 4930567H17RikQ3V0K5 233 aa24,83■■□□□ 1,57
Pcdhac2-201ENSMUST00000047479 Pcgf6Q99NA9 353 aa24,81■■□□□ 1,56
Pcdhac2-201ENSMUST00000047479 Chic1Q8CBW7 227 aa24,68■■□□□ 1,54
Pcdhac2-201ENSMUST00000047479 Mier1Q5UAK0 511 aa24,65■■□□□ 1,54
Pcdhac2-201ENSMUST00000047479 Plekhg3Q4VAC9 1341 aa24,65■■□□□ 1,54
Pcdhac2-201ENSMUST00000047479 Atp1b4Q99ME6 356 aa24,61■■□□□ 1,53
Pcdhac2-201ENSMUST00000047479 Erich6D3Z6S9 713 aa24,6■■□□□ 1,53
Pcdhac2-201ENSMUST00000047479 Zbtb4Q5F293 982 aa24,57■■□□□ 1,52
Pcdhac2-201ENSMUST00000047479 Supt5hO55201 1082 aaKnown RBP24,51■■□□□ 1,51
Pcdhac2-201ENSMUST00000047479 Fkbp15Q6P9Q6 1216 aaKnown RBP24,47■■□□□ 1,51
Pcdhac2-201ENSMUST00000047479 Gm13695A2AK44 830 aa24,45■■□□□ 1,5
Pcdhac2-201ENSMUST00000047479 Nlrp6Q91WS2 869 aa24,41■■□□□ 1,5
Pcdhac2-201ENSMUST00000047479 Prdm10Q3UTQ7 1184 aa24,4■■□□□ 1,5
Pcdhac2-201ENSMUST00000047479 Plppr3Q7TPB0 716 aa24,37■■□□□ 1,49
Pcdhac2-201ENSMUST00000047479 Hdac5Q9Z2V6 1113 aa24,26■■□□□ 1,47
Pcdhac2-201ENSMUST00000047479 Polr3glQ8R0C0 218 aa24,24■■□□□ 1,47
Pcdhac2-201ENSMUST00000047479 Myt1Q8CFC2 1127 aa24,22■■□□□ 1,47
Pcdhac2-201ENSMUST00000047479 ClspnQ80YR7 1315 aa24,18■■□□□ 1,46
Pcdhac2-201ENSMUST00000047479 Mapk8ip2Q9ERE9 830 aa24,16■■□□□ 1,46
Pcdhac2-201ENSMUST00000047479 Eid3Q3V124 375 aa24,15■■□□□ 1,46
Pcdhac2-201ENSMUST00000047479 Ubl4bQ9CQ84 188 aa24,15■■□□□ 1,46
Pcdhac2-201ENSMUST00000047479 Clip1Q922J3 1391 aa24,11■■□□□ 1,45
Pcdhac2-201ENSMUST00000047479 Rtl5Q5DTT4 599 aa24,11■■□□□ 1,45
Pcdhac2-201ENSMUST00000047479 Brd4Q9ESU6 1400 aaKnown RBP24,11■■□□□ 1,45
Pcdhac2-201ENSMUST00000047479 Abcc8B2RUS7 1588 aa24,05■■□□□ 1,44
Pcdhac2-201ENSMUST00000047479 DiexfQ8BTT6 772 aaKnown RBP24,04■■□□□ 1,44
Pcdhac2-201ENSMUST00000047479 Anp32aO35381 247 aa23,94■■□□□ 1,42
Pcdhac2-201ENSMUST00000047479 DaxxO35613 739 aa23,92■■□□□ 1,42
Pcdhac2-201ENSMUST00000047479 Ccer2J3QPU5 274 aa23,89■■□□□ 1,41
Pcdhac2-201ENSMUST00000047479 Safb2Q80YR5 991 aaKnown RBP23,88■■□□□ 1,41
Pcdhac2-201ENSMUST00000047479 ArxO35085 564 aa23,88■■□□□ 1,41
Pcdhac2-201ENSMUST00000047479 Chic2Q9D9G3 165 aa23,87■■□□□ 1,41
Pcdhac2-201ENSMUST00000047479 Rangap1P46061 589 aaKnown RBP23,85■■□□□ 1,41
Pcdhac2-201ENSMUST00000047479 Csrnp3P59055 597 aa23,8■■□□□ 1,4
Pcdhac2-201ENSMUST00000047479 Clstn2Q9ER65 966 aa23,72■■□□□ 1,39
Pcdhac2-201ENSMUST00000047479 Cep164Q5DU05 1446 aa23,71■■□□□ 1,39
Pcdhac2-201ENSMUST00000047479 P3h3Q8CG70 732 aa23,68■■□□□ 1,38
Pcdhac2-201ENSMUST00000047479 Rad21Q61550 635 aaKnown RBP23,67■■□□□ 1,38
Pcdhac2-201ENSMUST00000047479 BlmO88700 1416 aa23,66■■□□□ 1,38
Pcdhac2-201ENSMUST00000047479 Rb1cc1Q9ESK9 1588 aa23,59■■□□□ 1,37
Pcdhac2-201ENSMUST00000047479 Sall2Q9QX96 1004 aa23,58■■□□□ 1,37
Pcdhac2-201ENSMUST00000047479 Upf2A2AT37 1269 aaKnown RBP23,56■■□□□ 1,36
Pcdhac2-201ENSMUST00000047479 Gm38655A0A286YDK6 273 aa23,54■■□□□ 1,36
Pcdhac2-201ENSMUST00000047479 Mrs2Q5NCE8 434 aa23,49■■□□□ 1,35
Pcdhac2-201ENSMUST00000047479 Fgd1P52734 960 aa23,47■■□□□ 1,35
Pcdhac2-201ENSMUST00000047479 Dcaf1Q80TR8 1506 aa23,47■■□□□ 1,35
Pcdhac2-201ENSMUST00000047479 Setd5Q5XJV7 1441 aa23,45■■□□□ 1,34
Pcdhac2-201ENSMUST00000047479 Calr4Q3TQS0 420 aa23,44■■□□□ 1,34
Retrieved 100 of 22,080 RNA–protein pairs in 10,3 ms