RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Rhox8Q6VSS7 320 aa31.49■■■□□ 2.63
Pcdhac2-201ENSMUST00000047479 Ehmt2Q9Z148 1263 aaKnown RBP28.03■■■□□ 2.08
Pcdhac2-201ENSMUST00000047479 Rpgrip1Q9EPQ2 1331 aa27.96■■■□□ 2.07
Pcdhac2-201ENSMUST00000047479 Esf1Q3V1V3 845 aaKnown RBP27.92■■■□□ 2.06
Pcdhac2-201ENSMUST00000047479 Ccdc136Q3TVA9 1136 aa27.84■■■□□ 2.05
Pcdhac2-201ENSMUST00000047479 Cngb1E1AZ71 1325 aa27.79■■■□□ 2.04
Pcdhac2-201ENSMUST00000047479 Ube2uB1AUC4 352 aa27.57■■■□□ 2
Pcdhac2-201ENSMUST00000047479 Zeb1Q64318 1117 aa27.5■■□□□ 1.99
Pcdhac2-201ENSMUST00000047479 Wdr66E9Q743 1299 aa27.4■■□□□ 1.98
Pcdhac2-201ENSMUST00000047479 Las1lA2BE28 776 aaKnown RBP27.38■■□□□ 1.97
Pcdhac2-201ENSMUST00000047479 Gab3Q8BSM5 595 aa27.35■■□□□ 1.97
Pcdhac2-201ENSMUST00000047479 Npm2Q80W85 207 aa27.3■■□□□ 1.96
Pcdhac2-201ENSMUST00000047479 Trim41Q5NCC3 630 aa27.19■■□□□ 1.94
Pcdhac2-201ENSMUST00000047479 Myt1lP97500 1187 aa27.03■■□□□ 1.92
Pcdhac2-201ENSMUST00000047479 Pelp1Q9DBD5 1123 aaKnown RBP26.79■■□□□ 1.88
Pcdhac2-201ENSMUST00000047479 NischQ80TM9 1593 aa26.71■■□□□ 1.87
Pcdhac2-201ENSMUST00000047479 UbtfP25976 765 aaKnown RBP26.29■■□□□ 1.8
Pcdhac2-201ENSMUST00000047479 Il27Q8K3I6 234 aa26.18■■□□□ 1.78
Pcdhac2-201ENSMUST00000047479 Slc24a1Q91WD8 1130 aa26.01■■□□□ 1.75
Pcdhac2-201ENSMUST00000047479 NefmP08553 848 aa26■■□□□ 1.75
Pcdhac2-201ENSMUST00000047479 Stra8P70278 393 aa25.91■■□□□ 1.74
Pcdhac2-201ENSMUST00000047479 Acin1Q9JIX8 1338 aaKnown RBP25.83■■□□□ 1.73
Pcdhac2-201ENSMUST00000047479 CenpbP27790 599 aa25.74■■□□□ 1.71
Pcdhac2-201ENSMUST00000047479 Amer1Q7TS75 1132 aa25.7■■□□□ 1.7
Pcdhac2-201ENSMUST00000047479 Ap3b1Q9Z1T1 1105 aa25.67■■□□□ 1.7
Pcdhac2-201ENSMUST00000047479 Fam50aQ9WV03 339 aaKnown RBP25.61■■□□□ 1.69
Pcdhac2-201ENSMUST00000047479 Neurod1Q60867 357 aa25.55■■□□□ 1.68
Pcdhac2-201ENSMUST00000047479 Os9Q8K2C7 672 aa25.51■■□□□ 1.67
Pcdhac2-201ENSMUST00000047479 HrcG5E8J6 738 aa25.5■■□□□ 1.67
Pcdhac2-201ENSMUST00000047479 Zcchc6Q5BLK4 1491 aaKnown RBP25.49■■□□□ 1.67
Pcdhac2-201ENSMUST00000047479 Abcc9P70170 1546 aa25.47■■□□□ 1.67
Pcdhac2-201ENSMUST00000047479 Anp32bQ9EST5 272 aaKnown RBP25.46■■□□□ 1.67
Pcdhac2-201ENSMUST00000047479 Ccdc180J3QNE4 1664 aa25.41■■□□□ 1.66
Pcdhac2-201ENSMUST00000047479 NrdcQ8BHG1 1161 aa25.4■■□□□ 1.66
Pcdhac2-201ENSMUST00000047479 NclP09405 707 aaKnown RBP25.36■■□□□ 1.65
Pcdhac2-201ENSMUST00000047479 Gm35339A0A140LHH9 1649 aa25.29■■□□□ 1.64
Pcdhac2-201ENSMUST00000047479 Cdk11bP24788 784 aaKnown RBP25.29■■□□□ 1.64
Pcdhac2-201ENSMUST00000047479 NeflP08551 543 aa25.15■■□□□ 1.62
Pcdhac2-201ENSMUST00000047479 Eif5bQ05D44 1216 aaKnown RBP25.12■■□□□ 1.61
Pcdhac2-201ENSMUST00000047479 Ppargc1bQ8VHJ7 1014 aa25.04■■□□□ 1.6
Pcdhac2-201ENSMUST00000047479 Npm1Q61937 292 aaKnown RBP25.03■■□□□ 1.6
Pcdhac2-201ENSMUST00000047479 Zbtb7cQ8VCZ7 619 aa25.03■■□□□ 1.6
Pcdhac2-201ENSMUST00000047479 Rtl1Q7M732 1744 aa24.99■■□□□ 1.59
Pcdhac2-201ENSMUST00000047479 Nop58Q6DFW4 536 aaKnown RBP24.97■■□□□ 1.59
Pcdhac2-201ENSMUST00000047479 Tnnt3Q9QZ47 272 aa24.96■■□□□ 1.59
Pcdhac2-201ENSMUST00000047479 Ttbk1Q6PCN3 1308 aa24.96■■□□□ 1.59
Pcdhac2-201ENSMUST00000047479 TonslQ6NZL6 1363 aa24.92■■□□□ 1.58
Pcdhac2-201ENSMUST00000047479 Gm13697A2AK42 830 aa24.91■■□□□ 1.58
Pcdhac2-201ENSMUST00000047479 4933416C03RikQ3V063 378 aa24.9■■□□□ 1.58
Pcdhac2-201ENSMUST00000047479 Hnrnpul2Q00PI9 745 aaKnown RBP24.88■■□□□ 1.57
Pcdhac2-201ENSMUST00000047479 Lmod2Q3UHZ5 550 aa24.88■■□□□ 1.57
Pcdhac2-201ENSMUST00000047479 Ifnlr1Q8CGK5 535 aa24.87■■□□□ 1.57
Pcdhac2-201ENSMUST00000047479 4930567H17RikQ3V0K5 233 aa24.83■■□□□ 1.57
Pcdhac2-201ENSMUST00000047479 Pcgf6Q99NA9 353 aa24.81■■□□□ 1.56
Pcdhac2-201ENSMUST00000047479 Chic1Q8CBW7 227 aa24.68■■□□□ 1.54
Pcdhac2-201ENSMUST00000047479 Mier1Q5UAK0 511 aa24.65■■□□□ 1.54
Pcdhac2-201ENSMUST00000047479 Plekhg3Q4VAC9 1341 aa24.65■■□□□ 1.54
Pcdhac2-201ENSMUST00000047479 Atp1b4Q99ME6 356 aa24.61■■□□□ 1.53
Pcdhac2-201ENSMUST00000047479 Erich6D3Z6S9 713 aa24.6■■□□□ 1.53
Pcdhac2-201ENSMUST00000047479 Zbtb4Q5F293 982 aa24.57■■□□□ 1.52
Pcdhac2-201ENSMUST00000047479 Supt5hO55201 1082 aaKnown RBP24.51■■□□□ 1.51
Pcdhac2-201ENSMUST00000047479 Fkbp15Q6P9Q6 1216 aaKnown RBP24.47■■□□□ 1.51
Pcdhac2-201ENSMUST00000047479 Gm13695A2AK44 830 aa24.45■■□□□ 1.5
Pcdhac2-201ENSMUST00000047479 Nlrp6Q91WS2 869 aa24.41■■□□□ 1.5
Pcdhac2-201ENSMUST00000047479 Prdm10Q3UTQ7 1184 aa24.4■■□□□ 1.5
Pcdhac2-201ENSMUST00000047479 Plppr3Q7TPB0 716 aa24.37■■□□□ 1.49
Pcdhac2-201ENSMUST00000047479 Hdac5Q9Z2V6 1113 aa24.26■■□□□ 1.47
Pcdhac2-201ENSMUST00000047479 Polr3glQ8R0C0 218 aa24.24■■□□□ 1.47
Pcdhac2-201ENSMUST00000047479 Myt1Q8CFC2 1127 aa24.22■■□□□ 1.47
Pcdhac2-201ENSMUST00000047479 ClspnQ80YR7 1315 aa24.18■■□□□ 1.46
Pcdhac2-201ENSMUST00000047479 Mapk8ip2Q9ERE9 830 aa24.16■■□□□ 1.46
Pcdhac2-201ENSMUST00000047479 Eid3Q3V124 375 aa24.15■■□□□ 1.46
Pcdhac2-201ENSMUST00000047479 Ubl4bQ9CQ84 188 aa24.15■■□□□ 1.46
Pcdhac2-201ENSMUST00000047479 Clip1Q922J3 1391 aa24.11■■□□□ 1.45
Pcdhac2-201ENSMUST00000047479 Rtl5Q5DTT4 599 aa24.11■■□□□ 1.45
Pcdhac2-201ENSMUST00000047479 Brd4Q9ESU6 1400 aaKnown RBP24.11■■□□□ 1.45
Pcdhac2-201ENSMUST00000047479 Abcc8B2RUS7 1588 aa24.05■■□□□ 1.44
Pcdhac2-201ENSMUST00000047479 DiexfQ8BTT6 772 aaKnown RBP24.04■■□□□ 1.44
Pcdhac2-201ENSMUST00000047479 Anp32aO35381 247 aa23.94■■□□□ 1.42
Pcdhac2-201ENSMUST00000047479 DaxxO35613 739 aa23.92■■□□□ 1.42
Pcdhac2-201ENSMUST00000047479 Ccer2J3QPU5 274 aa23.89■■□□□ 1.41
Pcdhac2-201ENSMUST00000047479 Safb2Q80YR5 991 aaKnown RBP23.88■■□□□ 1.41
Pcdhac2-201ENSMUST00000047479 ArxO35085 564 aa23.88■■□□□ 1.41
Pcdhac2-201ENSMUST00000047479 Chic2Q9D9G3 165 aa23.87■■□□□ 1.41
Pcdhac2-201ENSMUST00000047479 Rangap1P46061 589 aaKnown RBP23.85■■□□□ 1.41
Pcdhac2-201ENSMUST00000047479 Csrnp3P59055 597 aa23.8■■□□□ 1.4
Pcdhac2-201ENSMUST00000047479 Clstn2Q9ER65 966 aa23.72■■□□□ 1.39
Pcdhac2-201ENSMUST00000047479 Cep164Q5DU05 1446 aa23.71■■□□□ 1.39
Pcdhac2-201ENSMUST00000047479 P3h3Q8CG70 732 aa23.68■■□□□ 1.38
Pcdhac2-201ENSMUST00000047479 Rad21Q61550 635 aaKnown RBP23.67■■□□□ 1.38
Pcdhac2-201ENSMUST00000047479 BlmO88700 1416 aa23.66■■□□□ 1.38
Pcdhac2-201ENSMUST00000047479 Rb1cc1Q9ESK9 1588 aa23.59■■□□□ 1.37
Pcdhac2-201ENSMUST00000047479 Sall2Q9QX96 1004 aa23.58■■□□□ 1.37
Pcdhac2-201ENSMUST00000047479 Upf2A2AT37 1269 aaKnown RBP23.56■■□□□ 1.36
Pcdhac2-201ENSMUST00000047479 Gm38655A0A286YDK6 273 aa23.54■■□□□ 1.36
Pcdhac2-201ENSMUST00000047479 Mrs2Q5NCE8 434 aa23.49■■□□□ 1.35
Pcdhac2-201ENSMUST00000047479 Fgd1P52734 960 aa23.47■■□□□ 1.35
Pcdhac2-201ENSMUST00000047479 Dcaf1Q80TR8 1506 aa23.47■■□□□ 1.35
Pcdhac2-201ENSMUST00000047479 Setd5Q5XJV7 1441 aa23.45■■□□□ 1.34
Pcdhac2-201ENSMUST00000047479 Calr4Q3TQS0 420 aa23.44■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms