RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Gm37013Q8K491 104 aa11.37□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Krtap29-1A2A5X4 342 aa11.36□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Defa25Q5G864 92 aa11.36□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Serp2Q6TAW2 65 aa11.35□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Csmd3Q80T79 3707 aa11.34□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Igkv3-4A0A140T8Q4 119 aa11.34□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Defb9Q8R2I6 67 aa11.34□□□□□ -0.59
Chmp6-201ENSMUST00000026434 Prr13Q9CQJ5 137 aa11.34□□□□□ -0.59
Chmp6-201ENSMUST00000026434 PlecQ9QXS1 4691 aaKnown RBP11.34□□□□□ -0.59
Chmp6-201ENSMUST00000026434 TgO08710 2766 aa11.34□□□□□ -0.59
Chmp6-201ENSMUST00000026434 7530416G11RikJ3QJX6 159 aa11.31□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Pcp4P63054 62 aa11.31□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Gm9918Q8BUR5 174 aa11.31□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Ly6g6cQ9Z1Q4 126 aa11.31□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Ube2aQ9Z255 152 aa11.31□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Dnah11E9Q7N9 4488 aa11.31□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Gm27235Q3UW50 83 aa11.3□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Igkv1-110A0A0B4J1I0 119 aa11.29□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Gm20604F8WIA3 75 aa11.29□□□□□ -0.6
Chmp6-201ENSMUST00000026434 FasnP19096 2504 aaKnown RBP11.29□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Gm28539A0A087WSL9 92 aa11.28□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Gm17689B3GLJ4 109 aa11.28□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Mrpl34Q99N91 92 aa11.28□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Plac8Q9JI48 112 aa11.28□□□□□ -0.6
Chmp6-201ENSMUST00000026434 Defa28D3Z1V9 94 aa11.28□□□□□ -0.6
Chmp6-201ENSMUST00000026434 GhrhP16043 103 aa11.28□□□□□ -0.6
Chmp6-201ENSMUST00000026434 6030445D17RikE9Q8F9 148 aa11.27□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Apoc4Q61268 124 aa11.27□□□□□ -0.61
Chmp6-201ENSMUST00000026434 A330070K13RikQ8CA53 115 aa11.27□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Fam19a3Q7TPG6 132 aa11.26□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Cystm1Q8K353 104 aa11.26□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Defa7P50705 93 aa11.25□□□□□ -0.61
Chmp6-201ENSMUST00000026434 4930518I15RikQ3V2W7 57 aa11.25□□□□□ -0.61
Chmp6-201ENSMUST00000026434 UqcrqQ9CQ69 82 aa11.25□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Fras1Q80T14 4010 aa11.24□□□□□ -0.61
Chmp6-201ENSMUST00000026434 2310050C09RikG5E8Z3 280 aa11.24□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Dnah9B1AR51 4484 aa11.24□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Igkv3-10A0A0G2JGN0 119 aa11.24□□□□□ -0.61
Chmp6-201ENSMUST00000026434 C130032M10RikQ8C888 123 aa11.24□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Gpr15lA0A0B4J1N3 78 aa11.23□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Igkv3-7A0A0G2JE31 119 aa11.23□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Gm9507D3Z5T3 223 aa11.23□□□□□ -0.61
Chmp6-201ENSMUST00000026434 NbdyA0A0N4SUI7 68 aa11.22□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Igkv3-5A0A140T8M6 119 aa11.22□□□□□ -0.61
Chmp6-201ENSMUST00000026434 Q8BT88 171 aa11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Znf706Q9D115 76 aaKnown RBP11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 PrkdcP97313 4128 aa11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Gm44790A0A0N4SV91 103 aa11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 1700018G05RikA0A1B0GSI2 66 aa11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Ccdc179J3QM76 67 aa11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Rpl37aP61514 92 aa11.2□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Odf3bQ5M8M2 238 aa11.19□□□□□ -0.62
Chmp6-201ENSMUST00000026434 D130052B06RikQ3UW13 202 aa11.18□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Wfdc13Q5DQQ6 81 aa11.18□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Gm28230A0A0A0MQ91 144 aa11.17□□□□□ -0.62
Chmp6-201ENSMUST00000026434 OxtP35454 125 aa11.16□□□□□ -0.62
Chmp6-201ENSMUST00000026434 ScxQ64124 207 aa11.16□□□□□ -0.62
Chmp6-201ENSMUST00000026434 Gm28374F6SG70 93 aa11.14□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Scgb1b2O35176 93 aa11.13□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Igkv8-19A0A0G2JFN8 121 aa11.12□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Gm21886J3QJU9 214 aa11.12□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Gm10642Q3TWM1 71 aa11.12□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Adm2Q7TNK8 150 aa11.11□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Gm10570F6VB42 170 aa11.1□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Fam229bQ8CF36 80 aa11.1□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Naa38Q9D2U5 125 aa11.1□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Tnp2P11378 117 aa11.09□□□□□ -0.63
Chmp6-201ENSMUST00000026434 Prr15lQ8JZM2 100 aa11.09□□□□□ -0.63
Chmp6-201ENSMUST00000026434 SmcpP15265 143 aa11.08□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Defa21Q8C1P2 93 aa11.07□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Defb39Q70KL3 74 aa11.07□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Cypt14J3QPF7 87 aa11.06□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Tmem258P61166 79 aa11.06□□□□□ -0.64
Chmp6-201ENSMUST00000026434 B230307C23RikQ8BLB2 64 aa11.05□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Gm19935A0A1B0GSF9 52 aa11.04□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Gm20726G3UX18 150 aa11.04□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Ryr1E9PZQ0 5035 aa11.03□□□□□ -0.64
Chmp6-201ENSMUST00000026434 1600014C23RikQ9DAX4 101 aa11.03□□□□□ -0.64
Chmp6-201ENSMUST00000026434 Smlr1J3QMJ4 66 aa11.01□□□□□ -0.65
Chmp6-201ENSMUST00000026434 Samd13D3YUG0 102 aa10.98□□□□□ -0.65
Chmp6-201ENSMUST00000026434 BikO70337 150 aa10.98□□□□□ -0.65
Chmp6-201ENSMUST00000026434 Smim20D3Z7Q2 69 aa10.95□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Reg3aO09037 175 aa10.94□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Rps28P62858 69 aaKnown RBP10.94□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Bean1Q9EQG5 255 aa10.94□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Dnah7cA0A087WR13 4024 aa10.93□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Spink8Q09TK9 105 aa10.93□□□□□ -0.66
Chmp6-201ENSMUST00000026434 A0A286YE49 62 aa10.92□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Krtap14O08640 167 aa10.92□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Vps13dB1ART2 4390 aa10.92□□□□□ -0.66
Chmp6-201ENSMUST00000026434 Gm16253D3Z167 63 aa10.9□□□□□ -0.67
Chmp6-201ENSMUST00000026434 Dnah2P0C6F1 4456 aa10.87□□□□□ -0.67
Chmp6-201ENSMUST00000026434 Gm2310J3QNJ2 377 aa10.86□□□□□ -0.67
Chmp6-201ENSMUST00000026434 Dnah7aE9Q0T8 4024 aa10.84□□□□□ -0.67
Chmp6-201ENSMUST00000026434 Coa6Q8BGD8 79 aa10.82□□□□□ -0.68
Chmp6-201ENSMUST00000026434 HrnrQ8VHD8 2496 aa10.82□□□□□ -0.68
Chmp6-201ENSMUST00000026434 Atox1O08997 68 aaKnown RBP10.81□□□□□ -0.68
Chmp6-201ENSMUST00000026434 Igkv3-3A0A140T8Q0 119 aa10.8□□□□□ -0.68
Chmp6-201ENSMUST00000026434 Pet100P0DJE0 76 aa10.79□□□□□ -0.68
Chmp6-201ENSMUST00000026434 ApobE9Q414 4505 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 114.7 ms