RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Gm43218A0A0G2JGT0 114 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Gm26661M0QWV4 156 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Gm5153P01627 120 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Wfdc13Q5DQQ6 81 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Ighv2-9A0A075B5Q5 116 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Rps28P62858 69 aaKnown RBP6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Defb40Q70KL2 73 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Tep1P97499 2629 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Vps13cQ8BX70 3748 aa6.53□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Utp20Q5XG71 2788 aaKnown RBP6.53□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Pkd1l1Q8R526 2615 aa6.53□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Wfdc10Q3V2J9 124 aa6.53□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Lypd5Q9D7Z7 256 aa6.53□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Zfhx4Q9JJN2 3550 aa6.53□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Gm10772F7AIG4 85 aa6.52□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Igkv1-110A0A0B4J1I0 119 aa6.52□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Igfn1Q3KNY0 2849 aa6.52□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Kmt2bO08550 2713 aa6.51□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Eif4ebp3Q80VV3 101 aa6.51□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Trank1Q8BV79 2999 aa6.51□□□□□ -1.37
Ldlr-202ENSMUST00000213114 H2al1kJ3QP08 105 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Ntn5Q3UQ22 452 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 H2al1aQ5M8Q2 105 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 H2al1eQ810S6 105 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Gm17509Q9CZ61 145 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Chd9Q8BYH8 2885 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Ndufb1P0DN34 57 aa6.49□□□□□ -1.37
Ldlr-202ENSMUST00000213114 HrnrQ8VHD8 2496 aa6.48□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Ighv1-56A0A0A6YXG2 117 aa6.48□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Gm11565A2A4M7 156 aa6.48□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Ighv10-3A0A075B5T6 119 aa6.48□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Ifitm6A0A1B0GS75 124 aa6.48□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Spint4Q9D263 159 aa6.47□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Igkv3-4A0A140T8Q4 119 aa6.47□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Gm10570F6VB42 170 aa6.47□□□□□ -1.37
Ldlr-202ENSMUST00000213114 A730009L09RikA0A1B0GS82 72 aa6.47□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Defb37Q7TMD2 62 aa6.47□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Cd164Q9R0L9 197 aa6.47□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Muc5acE9QAQ8 3455 aa6.46□□□□□ -1.37
Ldlr-202ENSMUST00000213114 A0A286YE49 62 aa6.46□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Gm16181B0V2H2 73 aa6.46□□□□□ -1.37
Ldlr-202ENSMUST00000213114 Sec61gP60060 68 aa6.46□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Krtap16-1A2A5X5 502 aa6.45□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Tex15F8VPN2 2785 aa6.45□□□□□ -1.38
Ldlr-202ENSMUST00000213114 A530084C06RikQ3UTW2 186 aa6.44□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Sprr2jO70561 109 aa6.44□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Celsr2Q9R0M0 2920 aa6.44□□□□□ -1.38
Ldlr-202ENSMUST00000213114 1600014C23RikQ9DAX4 101 aa6.44□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Igkv3-3A0A140T8Q0 119 aa6.43□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Gm10197F6QEY5 67 aa6.43□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Ccdc179J3QM76 67 aa6.43□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Coa6Q8BGD8 79 aa6.43□□□□□ -1.38
Ldlr-202ENSMUST00000213114 P01819 144 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Defb13Q8R2I4 64 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 9530053A07RikE9PVG8 2581 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 7530416G11RikJ3QJX6 159 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Defb38Q7TNV7 63 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Msrb1Q9JLC3 116 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Akap9Q70FJ1 3797 aa6.42□□□□□ -1.38
Ldlr-202ENSMUST00000213114 1700074P13RikQ9D9G7 251 aa6.41□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Snhg11Q4G0K9 87 aa6.41□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Fam19a3Q7TPG6 132 aa6.41□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Q8K1L6 76 aa6.41□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Spata3Q9D9T6 193 aa6.41□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Gm10267M0QWD8 85 aa6.4□□□□□ -1.38
Ldlr-202ENSMUST00000213114 E130208F15RikQ3UPV3 143 aa6.4□□□□□ -1.38
Ldlr-202ENSMUST00000213114 Nf1Q04690 2841 aa6.4□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Defb50Q6TU36 73 aa6.4□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Gm20604F8WIA3 75 aa6.39□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Adm2Q7TNK8 150 aa6.39□□□□□ -1.39
Ldlr-202ENSMUST00000213114 H2al1mQ9DAD9 105 aa6.39□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Igkv8-21A0A140T8P7 120 aa6.38□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Stab2Q8R4U0 2559 aa6.38□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Psors1c2Q80ZC9 134 aa6.38□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Q9DAA7 145 aa6.38□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Igkv8-27A0A0G2JF28 120 aa6.37□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Igkv8-30A0A140T8M3 121 aa6.37□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Krtap11-1E9Q2E9 183 aa6.37□□□□□ -1.39
Ldlr-202ENSMUST00000213114 4930519P11RikQ9CUJ8 166 aa6.37□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Defb11Q8R2I7 77 aa6.37□□□□□ -1.39
Ldlr-202ENSMUST00000213114 2310034G01RikA0A286YDL3 209 aa6.36□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Ighv2-5A0A0A6YY69 116 aa6.35□□□□□ -1.39
Ldlr-202ENSMUST00000213114 Gm9903Q8C9Y8 129 aa6.35□□□□□ -1.39
Ldlr-202ENSMUST00000213114 6430550D23RikE9Q1X6 194 aa6.34□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm7138L7N2C3 230 aa6.34□□□□□ -1.4
Ldlr-202ENSMUST00000213114 P84750 121 aa6.34□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm3238W4VSP7 230 aa6.34□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm28374F6SG70 93 aa6.33□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Csmd2V9GX34 3611 aa6.33□□□□□ -1.4
Ldlr-202ENSMUST00000213114 LrbaQ9ESE1 2856 aa6.33□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Igkv3-12A0A140T8P0 119 aa6.33□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm7137J3QMW1 236 aa6.33□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Elof1P60003 83 aa6.32□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Cox6a2P43023 97 aa6.32□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Sprr1bQ62267 153 aa6.32□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Znf706Q9D115 76 aaKnown RBP6.32□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Wfdc3Q14AE4 130 aa6.31□□□□□ -1.4
Ldlr-202ENSMUST00000213114 C530025M09RikF6RGA8 229 aa6.31□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Gm11627A6PWP4 55 aa6.31□□□□□ -1.4
Ldlr-202ENSMUST00000213114 Wfdc6bF6ULY1 148 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms