RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 H2al1eQ810S6 105 aa8.2□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Zfand2aQ9JII7 171 aa8.2□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Cd164Q9R0L9 197 aa8.19□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Serp1Q9Z1W5 66 aa8.19□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Lama5Q61001 3718 aa8.19□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Igfn1Q3KNY0 2849 aa8.18□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Ly6g6cQ9Z1Q4 126 aa8.18□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Gm10570F6VB42 170 aa8.18□□□□□ -1.1
Ndc1-204ENSMUST00000139560 4930556J24RikQ9D4U7 146 aa8.18□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Tcl1b5P56845 121 aa8.17□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Gm10197F6QEY5 67 aa8.16□□□□□ -1.1
Ndc1-204ENSMUST00000139560 P01819 144 aa8.16□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Smr3aQ61900 147 aa8.15□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Reg3aO09037 175 aa8.15□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Igkv8-21A0A140T8P7 120 aa8.15□□□□□ -1.1
Ndc1-204ENSMUST00000139560 Col27a1Q5QNQ9 1845 aa8.15□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Psmb11Q8BG41 302 aa8.15□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Nbeal2Q6ZQA0 2742 aa8.15□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Itpr3P70227 2670 aa8.14□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Igkv3-12A0A140T8P0 119 aa8.14□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Ighv2-9A0A075B5Q5 116 aa8.13□□□□□ -1.11
Ndc1-204ENSMUST00000139560 A530084C06RikQ3UTW2 186 aa8.13□□□□□ -1.11
Ndc1-204ENSMUST00000139560 7530416G11RikJ3QJX6 159 aa8.13□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Pkd1l1Q8R526 2615 aa8.13□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Ntn5Q3UQ22 452 aa8.12□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Gm16485Q8C4B7 115 aa8.12□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Svep1A2AVA0 3567 aa8.12□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Ighv2-9-1A0A075B697 116 aa8.12□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Sprr2jO70561 109 aa8.12□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Adgrg4B7ZCC9 3073 aa8.12□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Odf3l2Q3TZ65 277 aa8.11□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Msrb1Q9JLC3 116 aa8.11□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Igkv8-27A0A0G2JF28 120 aa8.11□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Igkv8-30A0A140T8M3 121 aa8.11□□□□□ -1.11
Ndc1-204ENSMUST00000139560 1600014C23RikQ9DAX4 101 aa8.1□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Gm17689B3GLJ4 109 aa8.1□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Spint4Q9D263 159 aa8.1□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Ccdc179J3QM76 67 aa8.1□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Ighv1-56A0A0A6YXG2 117 aa8.09□□□□□ -1.11
Ndc1-204ENSMUST00000139560 P84750 121 aa8.09□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Srsf12Q8C8K3 266 aa8.09□□□□□ -1.11
Ndc1-204ENSMUST00000139560 UqcrqQ9CQ69 82 aa8.09□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Q9DAA7 145 aa8.09□□□□□ -1.11
Ndc1-204ENSMUST00000139560 A730009L09RikA0A1B0GS82 72 aa8.09□□□□□ -1.11
Ndc1-204ENSMUST00000139560 Sox16Q62247 57 aa8.08□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Coa6Q8BGD8 79 aa8.08□□□□□ -1.12
Ndc1-204ENSMUST00000139560 CrygaP04345 174 aa8.07□□□□□ -1.12
Ndc1-204ENSMUST00000139560 H2al1kJ3QP08 105 aa8.07□□□□□ -1.12
Ndc1-204ENSMUST00000139560 MobpQ9D2P8 170 aa8.06□□□□□ -1.12
Ndc1-204ENSMUST00000139560 C130032M10RikQ8C888 123 aa8.06□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Gm5617Q91VN2 117 aa8.06□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Trank1Q8BV79 2999 aa8.05□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Bean1Q9EQG5 255 aa8.05□□□□□ -1.12
Ndc1-204ENSMUST00000139560 1700018G05RikA0A1B0GSI2 66 aa8.05□□□□□ -1.12
Ndc1-204ENSMUST00000139560 2310034G01RikA0A286YDL3 209 aa8.05□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Igsf10Q3V1M1 2594 aa8.05□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Gm44790A0A0N4SV91 103 aa8.04□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Ighv8-13A0A075B5Y0 101 aa8.04□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Krtap16-1A2A5X5 502 aa8.04□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Wfdc17Q5SSJ1 76 aa8.04□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Col6a5A6H584 2640 aa8.04□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Sec61gP60060 68 aa8.03□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Adm2Q7TNK8 150 aa8.03□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Muc4Q8JZM8 3443 aa8.03□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Gm28230A0A0A0MQ91 144 aa8.03□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Mrpl34Q99N91 92 aa8.03□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Muc2Q80Z19 2680 aa8.02□□□□□ -1.12
Ndc1-204ENSMUST00000139560 Krtap24-1G3X9A2 248 aa8.02□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Q8K1L6 76 aa8.02□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm17509Q9CZ61 145 aa8.02□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm21886J3QJU9 214 aa8.01□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Ndufb1P0DN34 57 aa8.01□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Stab2Q8R4U0 2559 aa8.01□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Defb39Q70KL3 74 aa8.01□□□□□ -1.13
Ndc1-204ENSMUST00000139560 H2al1mQ9DAD9 105 aa8□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm9903Q8C9Y8 129 aa8□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm10770F7D043 238 aa8□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Cox6a2P43023 97 aa8□□□□□ -1.13
Ndc1-204ENSMUST00000139560 9530053A07RikE9PVG8 2581 aa7.99□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Utp20Q5XG71 2788 aaKnown RBP7.99□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm9195A0A140LHT4 2805 aa7.98□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Col5a1O88207 1838 aa7.98□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm26661M0QWV4 156 aa7.98□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Rpl37aP61514 92 aa7.96□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Gm3233E9Q2H5 230 aa7.96□□□□□ -1.13
Ndc1-204ENSMUST00000139560 Igkv3-7A0A0G2JE31 119 aa7.96□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Celsr2Q9R0M0 2920 aa7.96□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Chd9Q8BYH8 2885 aa7.96□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Rps28P62858 69 aaKnown RBP7.95□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Gm10772F7AIG4 85 aa7.95□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Fam229bQ8CF36 80 aa7.95□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Znf706Q9D115 76 aaKnown RBP7.94□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Gm20604F8WIA3 75 aa7.94□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Hivep1Q03172 2688 aa7.94□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Gm28374F6SG70 93 aa7.93□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Zzef1Q5SSH7 2924 aa7.93□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Wfdc6bF6ULY1 148 aa7.93□□□□□ -1.14
Ndc1-204ENSMUST00000139560 Gm16181B0V2H2 73 aa7.91□□□□□ -1.14
Ndc1-204ENSMUST00000139560 1810062G17RikG3X8Y2 129 aa7.9□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Gm10160F6Y577 67 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 72.2 ms