RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Igkv3-7A0A0G2JE31 119 aa10.96□□□□□ -0.66
Synpo-206ENSMUST00000130360 Krtap11-1E9Q2E9 183 aa10.96□□□□□ -0.66
Synpo-206ENSMUST00000130360 Wfdc3Q14AE4 130 aa10.96□□□□□ -0.66
Synpo-206ENSMUST00000130360 Sprr4Q8CGN8 76 aa10.95□□□□□ -0.66
Synpo-206ENSMUST00000130360 Tnrc18Q80WC3 2878 aa10.94□□□□□ -0.66
Synpo-206ENSMUST00000130360 Gm11565A2A4M7 156 aa10.94□□□□□ -0.66
Synpo-206ENSMUST00000130360 Gm28374F6SG70 93 aa10.94□□□□□ -0.66
Synpo-206ENSMUST00000130360 Gm11213A0A1B0GR83 88 aa10.92□□□□□ -0.66
Synpo-206ENSMUST00000130360 Gm10643Q3URG9 111 aa10.92□□□□□ -0.66
Synpo-206ENSMUST00000130360 Gm7276Q3TYW4 209 aa10.92□□□□□ -0.66
Synpo-206ENSMUST00000130360 Gm10837Q3UTT8 145 aa10.91□□□□□ -0.66
Synpo-206ENSMUST00000130360 C530025M09RikF6RGA8 229 aa10.91□□□□□ -0.66
Synpo-206ENSMUST00000130360 PtprqP0C5E4 2300 aa10.91□□□□□ -0.66
Synpo-206ENSMUST00000130360 CnbpP53996 178 aaKnown RBP10.9□□□□□ -0.66
Synpo-206ENSMUST00000130360 Wfdc17Q5SSJ1 76 aa10.9□□□□□ -0.66
Synpo-206ENSMUST00000130360 Notch2O35516 2470 aa10.89□□□□□ -0.67
Synpo-206ENSMUST00000130360 Rpl37aP61514 92 aa10.88□□□□□ -0.67
Synpo-206ENSMUST00000130360 Fam229bQ8CF36 80 aa10.88□□□□□ -0.67
Synpo-206ENSMUST00000130360 A330070K13RikQ8CA53 115 aa10.87□□□□□ -0.67
Synpo-206ENSMUST00000130360 UtrnE9Q6R7 3430 aa10.87□□□□□ -0.67
Synpo-206ENSMUST00000130360 1600014C23RikQ9DAX4 101 aa10.87□□□□□ -0.67
Synpo-206ENSMUST00000130360 A930002H24RikQ8C8Y3 163 aa10.86□□□□□ -0.67
Synpo-206ENSMUST00000130360 Q8BT88 171 aa10.86□□□□□ -0.67
Synpo-206ENSMUST00000130360 PolqQ8CGS6 2544 aa10.84□□□□□ -0.67
Synpo-206ENSMUST00000130360 Gm10642Q3TWM1 71 aa10.82□□□□□ -0.68
Synpo-206ENSMUST00000130360 Ankrd17Q99NH0 2603 aaKnown RBP10.82□□□□□ -0.68
Synpo-206ENSMUST00000130360 AplnQ9R0R4 77 aa10.82□□□□□ -0.68
Synpo-206ENSMUST00000130360 Znf414Q9DCK4 299 aa10.8□□□□□ -0.68
Synpo-206ENSMUST00000130360 Ly6g6cQ9Z1Q4 126 aa10.8□□□□□ -0.68
Synpo-206ENSMUST00000130360 Phf5aP83870 110 aaKnown RBP10.8□□□□□ -0.68
Synpo-206ENSMUST00000130360 Gm27235Q3UW50 83 aa10.78□□□□□ -0.68
Synpo-206ENSMUST00000130360 Fam168bQ80XQ8 194 aa10.78□□□□□ -0.68
Synpo-206ENSMUST00000130360 Defb39Q70KL3 74 aa10.77□□□□□ -0.68
Synpo-206ENSMUST00000130360 Unc79Q0KK59 2596 aa10.77□□□□□ -0.69
Synpo-206ENSMUST00000130360 Gm10999F6Q4M4 69 aa10.76□□□□□ -0.69
Synpo-206ENSMUST00000130360 TrioQ0KL02 3102 aa10.75□□□□□ -0.69
Synpo-206ENSMUST00000130360 Myo18bE9PV66 2605 aa10.75□□□□□ -0.69
Synpo-206ENSMUST00000130360 Gm3250E9Q1M3 230 aa10.73□□□□□ -0.69
Synpo-206ENSMUST00000130360 Uqcr11Q9CPX8 56 aa10.72□□□□□ -0.69
Synpo-206ENSMUST00000130360 AW011738F6S7Q2 159 aa10.71□□□□□ -0.69
Synpo-206ENSMUST00000130360 Spata3Q9D9T6 193 aa10.68□□□□□ -0.7
Synpo-206ENSMUST00000130360 Cystm1Q8K353 104 aa10.67□□□□□ -0.7
Synpo-206ENSMUST00000130360 Lelp1Q9DAE3 120 aa10.66□□□□□ -0.7
Synpo-206ENSMUST00000130360 Chd7A2AJK6 2986 aaKnown RBP10.65□□□□□ -0.7
Synpo-206ENSMUST00000130360 Usp9yF8VPU6 2556 aa10.65□□□□□ -0.71
Synpo-206ENSMUST00000130360 Gcn1E9PVA8 2671 aaKnown RBP10.65□□□□□ -0.71
Synpo-206ENSMUST00000130360 Gm12216A0A1W2P827 62 aa10.64□□□□□ -0.71
Synpo-206ENSMUST00000130360 Chtf8P0CG14 533 aa10.64□□□□□ -0.71
Synpo-206ENSMUST00000130360 4930507D05RikQ8C9C9 103 aa10.64□□□□□ -0.71
Synpo-206ENSMUST00000130360 Prrc2cQ3TLH4 2846 aaKnown RBP10.63□□□□□ -0.71
Synpo-206ENSMUST00000130360 Map1aQ9QYR6 2776 aa10.63□□□□□ -0.71
Synpo-206ENSMUST00000130360 Prune2Q52KR3 3084 aa10.62□□□□□ -0.71
Synpo-206ENSMUST00000130360 Fam104aA2A6P4 185 aa10.6□□□□□ -0.71
Synpo-206ENSMUST00000130360 Nbeal1E9PYP2 2688 aa10.59□□□□□ -0.71
Synpo-206ENSMUST00000130360 HttP42859 3119 aa10.58□□□□□ -0.72
Synpo-206ENSMUST00000130360 Gm10320E9PW43 113 aa10.57□□□□□ -0.72
Synpo-206ENSMUST00000130360 Gm17606F6ZL36 78 aa10.57□□□□□ -0.72
Synpo-206ENSMUST00000130360 Gm9195A0A140LHT4 2805 aa10.56□□□□□ -0.72
Synpo-206ENSMUST00000130360 Q8BGJ3 129 aa10.55□□□□□ -0.72
Synpo-206ENSMUST00000130360 Dmbt1Q60997 2085 aa10.55□□□□□ -0.72
Synpo-206ENSMUST00000130360 Defb1P56386 69 aa10.54□□□□□ -0.72
Synpo-206ENSMUST00000130360 Mki67E9PVX6 3177 aaKnown RBP10.54□□□□□ -0.72
Synpo-206ENSMUST00000130360 SmcpP15265 143 aa10.54□□□□□ -0.72
Synpo-206ENSMUST00000130360 Lama2Q60675 3118 aaKnown RBP10.53□□□□□ -0.72
Synpo-206ENSMUST00000130360 Gpr15lA0A0B4J1N3 78 aa10.53□□□□□ -0.72
Synpo-206ENSMUST00000130360 Lama3Q61789 3330 aa10.53□□□□□ -0.72
Synpo-206ENSMUST00000130360 Zcchc13Q9D548 170 aa10.51□□□□□ -0.73
Synpo-206ENSMUST00000130360 Spaca4Q80ZQ0 127 aa10.5□□□□□ -0.73
Synpo-206ENSMUST00000130360 Defb11Q8R2I7 77 aa10.49□□□□□ -0.73
Synpo-206ENSMUST00000130360 FlnaQ8BTM8 2647 aaKnown RBP10.47□□□□□ -0.73
Synpo-206ENSMUST00000130360 Defb9Q8R2I6 67 aa10.46□□□□□ -0.74
Synpo-206ENSMUST00000130360 Phxr5P08399 672 aa10.45□□□□□ -0.74
Synpo-206ENSMUST00000130360 Smim29Q8R043 75 aa10.44□□□□□ -0.74
Synpo-206ENSMUST00000130360 Jbts17Q8CE72 3214 aa10.44□□□□□ -0.74
Synpo-206ENSMUST00000130360 Col12a1Q60847 3120 aa10.42□□□□□ -0.74
Synpo-206ENSMUST00000130360 Cypt15B1AXS0 87 aa10.41□□□□□ -0.74
Synpo-206ENSMUST00000130360 Cfap54Q8C6S9 3106 aa10.4□□□□□ -0.74
Synpo-206ENSMUST00000130360 Gm3233E9Q2H5 230 aa10.37□□□□□ -0.75
Synpo-206ENSMUST00000130360 Mp68P56379 58 aa10.36□□□□□ -0.75
Synpo-206ENSMUST00000130360 A730071L15RikQ8C4X0 137 aa10.36□□□□□ -0.75
Synpo-206ENSMUST00000130360 Usp34Q6ZQ93 3582 aa10.35□□□□□ -0.75
Synpo-206ENSMUST00000130360 Cypt14J3QPF7 87 aa10.3□□□□□ -0.76
Synpo-206ENSMUST00000130360 Bod1lE9Q6J5 3032 aa10.29□□□□□ -0.76
Synpo-206ENSMUST00000130360 Gm7173A0A0G2JEB6 3132 aa10.28□□□□□ -0.76
Synpo-206ENSMUST00000130360 Rev3lQ61493 3122 aa10.28□□□□□ -0.76
Synpo-206ENSMUST00000130360 Gm20538F6Z9R1 75 aa10.28□□□□□ -0.76
Synpo-206ENSMUST00000130360 Sprr1aQ62266 144 aa10.27□□□□□ -0.76
Synpo-206ENSMUST00000130360 Ankrd11E9Q4F7 2643 aa10.26□□□□□ -0.77
Synpo-206ENSMUST00000130360 Gm21798J3QNU5 87 aa10.26□□□□□ -0.77
Synpo-206ENSMUST00000130360 Gm10065F6TJM2 114 aa10.25□□□□□ -0.77
Synpo-206ENSMUST00000130360 NipblQ6KCD5 2798 aaKnown RBP10.25□□□□□ -0.77
Synpo-206ENSMUST00000130360 Gm10139O88245 57 aa10.24□□□□□ -0.77
Synpo-206ENSMUST00000130360 Gm3646F6S692 53 aa10.24□□□□□ -0.77
Synpo-206ENSMUST00000130360 CicQ924A2 2510 aa10.24□□□□□ -0.77
Synpo-206ENSMUST00000130360 2310034C09RikQ9D746 214 aa10.23□□□□□ -0.77
Synpo-206ENSMUST00000130360 Anapc11Q9CPX9 84 aa10.22□□□□□ -0.77
Synpo-206ENSMUST00000130360 Hectd1Q69ZR2 2618 aaKnown RBP10.22□□□□□ -0.77
Synpo-206ENSMUST00000130360 Plac8Q9JI48 112 aa10.22□□□□□ -0.77
Synpo-206ENSMUST00000130360 Gm26620Q9CY65 116 aa10.22□□□□□ -0.77
Synpo-206ENSMUST00000130360 Dmxl1Q6PNC0 3013 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms