RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Rhox8Q6VSS7 320 aa28.75■■■□□ 2.19
Synpo-206ENSMUST00000130360 Rpgrip1Q9EPQ2 1331 aa27.38■■□□□ 1.97
Synpo-206ENSMUST00000130360 NischQ80TM9 1593 aa26.56■■□□□ 1.84
Synpo-206ENSMUST00000130360 Las1lA2BE28 776 aaKnown RBP26.03■■□□□ 1.76
Synpo-206ENSMUST00000130360 Ehmt2Q9Z148 1263 aaKnown RBP26.01■■□□□ 1.75
Synpo-206ENSMUST00000130360 Ccdc136Q3TVA9 1136 aa25.72■■□□□ 1.71
Synpo-206ENSMUST00000130360 Cngb1E1AZ71 1325 aa25.65■■□□□ 1.7
Synpo-206ENSMUST00000130360 Ccdc180J3QNE4 1664 aa25.48■■□□□ 1.67
Synpo-206ENSMUST00000130360 Trim41Q5NCC3 630 aa25.45■■□□□ 1.66
Synpo-206ENSMUST00000130360 Acin1Q9JIX8 1338 aaKnown RBP25.41■■□□□ 1.66
Synpo-206ENSMUST00000130360 Rtl1Q7M732 1744 aa25.41■■□□□ 1.66
Synpo-206ENSMUST00000130360 Wdr66E9Q743 1299 aa25.16■■□□□ 1.62
Synpo-206ENSMUST00000130360 Zeb1Q64318 1117 aa25.15■■□□□ 1.62
Synpo-206ENSMUST00000130360 Esf1Q3V1V3 845 aaKnown RBP25.14■■□□□ 1.62
Synpo-206ENSMUST00000130360 Abcc9P70170 1546 aa25.07■■□□□ 1.6
Synpo-206ENSMUST00000130360 HrcG5E8J6 738 aa25.07■■□□□ 1.6
Synpo-206ENSMUST00000130360 Gab3Q8BSM5 595 aa25.03■■□□□ 1.6
Synpo-206ENSMUST00000130360 Pelp1Q9DBD5 1123 aaKnown RBP24.93■■□□□ 1.58
Synpo-206ENSMUST00000130360 NefmP08553 848 aa24.85■■□□□ 1.57
Synpo-206ENSMUST00000130360 CenpbP27790 599 aa24.79■■□□□ 1.56
Synpo-206ENSMUST00000130360 Pcgf6Q99NA9 353 aa24.68■■□□□ 1.54
Synpo-206ENSMUST00000130360 Npm2Q80W85 207 aa24.62■■□□□ 1.53
Synpo-206ENSMUST00000130360 Myt1lP97500 1187 aa24.46■■□□□ 1.51
Synpo-206ENSMUST00000130360 Myt1Q8CFC2 1127 aa24.43■■□□□ 1.5
Synpo-206ENSMUST00000130360 Abcc8B2RUS7 1588 aa24.4■■□□□ 1.5
Synpo-206ENSMUST00000130360 Ube2uB1AUC4 352 aa24.31■■□□□ 1.48
Synpo-206ENSMUST00000130360 UbtfP25976 765 aaKnown RBP24.29■■□□□ 1.48
Synpo-206ENSMUST00000130360 Zcchc6Q5BLK4 1491 aaKnown RBP24.14■■□□□ 1.45
Synpo-206ENSMUST00000130360 Cdk11bP24788 784 aaKnown RBP24.14■■□□□ 1.45
Synpo-206ENSMUST00000130360 Stra8P70278 393 aa24.12■■□□□ 1.45
Synpo-206ENSMUST00000130360 Supt5hO55201 1082 aaKnown RBP24.06■■□□□ 1.44
Synpo-206ENSMUST00000130360 Nop58Q6DFW4 536 aaKnown RBP23.86■■□□□ 1.41
Synpo-206ENSMUST00000130360 Gm35339A0A140LHH9 1649 aa23.85■■□□□ 1.41
Synpo-206ENSMUST00000130360 Amer1Q7TS75 1132 aa23.85■■□□□ 1.41
Synpo-206ENSMUST00000130360 Dcaf1Q80TR8 1506 aa23.82■■□□□ 1.4
Synpo-206ENSMUST00000130360 Tnnt3Q9QZ47 272 aa23.8■■□□□ 1.4
Synpo-206ENSMUST00000130360 Mier1Q5UAK0 511 aa23.68■■□□□ 1.38
Synpo-206ENSMUST00000130360 TonslQ6NZL6 1363 aa23.6■■□□□ 1.37
Synpo-206ENSMUST00000130360 Cep164Q5DU05 1446 aa23.54■■□□□ 1.36
Synpo-206ENSMUST00000130360 Slc24a1Q91WD8 1130 aa23.53■■□□□ 1.36
Synpo-206ENSMUST00000130360 Il27Q8K3I6 234 aa23.5■■□□□ 1.35
Synpo-206ENSMUST00000130360 Neurod1Q60867 357 aa23.47■■□□□ 1.35
Synpo-206ENSMUST00000130360 Rtl5Q5DTT4 599 aa23.42■■□□□ 1.34
Synpo-206ENSMUST00000130360 NclP09405 707 aaKnown RBP23.4■■□□□ 1.34
Synpo-206ENSMUST00000130360 ClspnQ80YR7 1315 aa23.39■■□□□ 1.33
Synpo-206ENSMUST00000130360 Fam50aQ9WV03 339 aaKnown RBP23.37■■□□□ 1.33
Synpo-206ENSMUST00000130360 Rb1cc1Q9ESK9 1588 aa23.37■■□□□ 1.33
Synpo-206ENSMUST00000130360 Ttbk1Q6PCN3 1308 aa23.36■■□□□ 1.33
Synpo-206ENSMUST00000130360 DiexfQ8BTT6 772 aaKnown RBP23.35■■□□□ 1.33
Synpo-206ENSMUST00000130360 Brd4Q9ESU6 1400 aaKnown RBP23.35■■□□□ 1.33
Synpo-206ENSMUST00000130360 Ppargc1bQ8VHJ7 1014 aa23.33■■□□□ 1.33
Synpo-206ENSMUST00000130360 Ap3b1Q9Z1T1 1105 aa23.32■■□□□ 1.32
Synpo-206ENSMUST00000130360 NrdcQ8BHG1 1161 aa23.27■■□□□ 1.32
Synpo-206ENSMUST00000130360 Anks4bQ8K3X6 423 aa23.26■■□□□ 1.31
Synpo-206ENSMUST00000130360 4933416C03RikQ3V063 378 aa23.19■■□□□ 1.3
Synpo-206ENSMUST00000130360 Anp32bQ9EST5 272 aaKnown RBP23.14■■□□□ 1.3
Synpo-206ENSMUST00000130360 Aplp2Q06335 707 aa23.11■■□□□ 1.29
Synpo-206ENSMUST00000130360 Chic1Q8CBW7 227 aa23.1■■□□□ 1.29
Synpo-206ENSMUST00000130360 Csrnp3P59055 597 aa23.1■■□□□ 1.29
Synpo-206ENSMUST00000130360 Sall2Q9QX96 1004 aa23.1■■□□□ 1.29
Synpo-206ENSMUST00000130360 Anp32aO35381 247 aa23.08■■□□□ 1.28
Synpo-206ENSMUST00000130360 Plekhg3Q4VAC9 1341 aa23.05■■□□□ 1.28
Synpo-206ENSMUST00000130360 Eif5bQ05D44 1216 aaKnown RBP23.03■■□□□ 1.28
Synpo-206ENSMUST00000130360 Baz1aO88379 1555 aa22.96■■□□□ 1.27
Synpo-206ENSMUST00000130360 NeflP08551 543 aa22.96■■□□□ 1.27
Synpo-206ENSMUST00000130360 Clip1Q922J3 1391 aa22.93■■□□□ 1.26
Synpo-206ENSMUST00000130360 NacadQ5SWP3 1504 aa22.86■■□□□ 1.25
Synpo-206ENSMUST00000130360 Gm38655A0A286YDK6 273 aa22.83■■□□□ 1.24
Synpo-206ENSMUST00000130360 Npm1Q61937 292 aaKnown RBP22.77■■□□□ 1.24
Synpo-206ENSMUST00000130360 Lmod2Q3UHZ5 550 aa22.77■■□□□ 1.23
Synpo-206ENSMUST00000130360 Ccer2J3QPU5 274 aa22.75■■□□□ 1.23
Synpo-206ENSMUST00000130360 4930567H17RikQ3V0K5 233 aa22.74■■□□□ 1.23
Synpo-206ENSMUST00000130360 Golga3P55937 1487 aa22.7■■□□□ 1.22
Synpo-206ENSMUST00000130360 1700123L14RikQ3V2K7 440 aa22.68■■□□□ 1.22
Synpo-206ENSMUST00000130360 Eid3Q3V124 375 aa22.66■■□□□ 1.22
Synpo-206ENSMUST00000130360 Os9Q8K2C7 672 aa22.52■■□□□ 1.2
Synpo-206ENSMUST00000130360 DaxxO35613 739 aa22.49■■□□□ 1.19
Synpo-206ENSMUST00000130360 Mapk8ip2Q9ERE9 830 aa22.46■■□□□ 1.19
Synpo-206ENSMUST00000130360 Rsf1E9PWW9 1441 aaKnown RBP22.45■■□□□ 1.18
Synpo-206ENSMUST00000130360 Calr4Q3TQS0 420 aa22.43■■□□□ 1.18
Synpo-206ENSMUST00000130360 Kdm5dQ62240 1548 aa22.42■■□□□ 1.18
Synpo-206ENSMUST00000130360 Aebp2Q9Z248 504 aaKnown RBP22.36■■□□□ 1.17
Synpo-206ENSMUST00000130360 BlmO88700 1416 aa22.34■■□□□ 1.17
Synpo-206ENSMUST00000130360 Setd5Q5XJV7 1441 aa22.33■■□□□ 1.16
Synpo-206ENSMUST00000130360 Ppp4r2Q0VGB7 417 aa22.29■■□□□ 1.16
Synpo-206ENSMUST00000130360 Fam71e1A1L3C1 212 aa22.26■■□□□ 1.15
Synpo-206ENSMUST00000130360 Hdac5Q9Z2V6 1113 aa22.26■■□□□ 1.15
Synpo-206ENSMUST00000130360 Ccdc9Q8VC31 543 aaKnown RBP22.23■■□□□ 1.15
Synpo-206ENSMUST00000130360 Eea1Q8BL66 1411 aa22.22■■□□□ 1.15
Synpo-206ENSMUST00000130360 Wdr43Q6ZQL4 677 aaKnown RBP22.22■■□□□ 1.15
Synpo-206ENSMUST00000130360 Upf2A2AT37 1269 aaKnown RBP22.18■■□□□ 1.14
Synpo-206ENSMUST00000130360 Zbtb7cQ8VCZ7 619 aa22.14■■□□□ 1.14
Synpo-206ENSMUST00000130360 Hnrnpul2Q00PI9 745 aaKnown RBP22.14■■□□□ 1.13
Synpo-206ENSMUST00000130360 Crybg2B7ZCC2 1516 aa22.13■■□□□ 1.13
Synpo-206ENSMUST00000130360 Mrs2Q5NCE8 434 aa22.13■■□□□ 1.13
Synpo-206ENSMUST00000130360 Ccdc88bQ4QRL3 1481 aa22.09■■□□□ 1.13
Synpo-206ENSMUST00000130360 Bcl11aQ9QYE3 773 aa22.08■■□□□ 1.12
Synpo-206ENSMUST00000130360 Hsp90aa1P07901 733 aaKnown RBP22.07■■□□□ 1.12
Synpo-206ENSMUST00000130360 Chic2Q9D9G3 165 aa22.07■■□□□ 1.12
Synpo-206ENSMUST00000130360 Nlrp6Q91WS2 869 aa22.06■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms