RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Flg2Q2VIS4 2362 aa12.12□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Gm3285A0A1W2P7U0 201 aa12.12□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Reg3aO09037 175 aa12.12□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Gm43218A0A0G2JGT0 114 aa12.12□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Chchd10Q7TNL9 138 aa12.11□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Chd8Q09XV5 2582 aaKnown RBP12.11□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Crip3Q6Q6R3 243 aa12.11□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Spink13Q3UTS8 97 aa12.1□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Fam19a3Q7TPG6 132 aa12.1□□□□□ -0.47
Shroom3-211ENSMUST00000225438 PtprqP0C5E4 2300 aa12.1□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Bean1Q9EQG5 255 aa12.1□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Nav3Q80TN7 2359 aa12.09□□□□□ -0.47
Shroom3-211ENSMUST00000225438 A730009L09RikA0A1B0GS82 72 aa12.09□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Ankhd1E9PUR0 2548 aaKnown RBP12.09□□□□□ -0.47
Shroom3-211ENSMUST00000225438 SnurfQ9WU12 71 aa12.09□□□□□ -0.47
Shroom3-211ENSMUST00000225438 Gm16181B0V2H2 73 aa12.08□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Tln1P26039 2541 aaKnown RBP12.08□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Srsf12Q8C8K3 266 aa12.08□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Smr3aQ61900 147 aa12.07□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Cox6a2P43023 97 aa12.07□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Defb11Q8R2I7 77 aa12.07□□□□□ -0.48
Shroom3-211ENSMUST00000225438 3110070M22RikQ9DAQ7 118 aa12.07□□□□□ -0.48
Shroom3-211ENSMUST00000225438 4930519P11RikQ9CUJ8 166 aa12.06□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Mrpl34Q99N91 92 aa12.05□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Coa6Q8BGD8 79 aa12.05□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Kiaa1549Q68FD9 1940 aa12.05□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Gm10642Q3TWM1 71 aa12.05□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Defb37Q7TMD2 62 aa12.02□□□□□ -0.48
Shroom3-211ENSMUST00000225438 PtprbB2RU80 1998 aa12.02□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Gm11627A6PWP4 55 aa12.02□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Msrb1Q9JLC3 116 aa12.02□□□□□ -0.48
Shroom3-211ENSMUST00000225438 Alms1Q8K4E0 3251 aa12.02□□□□□ -0.49
Shroom3-211ENSMUST00000225438 1700018G05RikA0A1B0GSI2 66 aa12.01□□□□□ -0.49
Shroom3-211ENSMUST00000225438 Sptbn4E9PX29 2561 aa12□□□□□ -0.49
Shroom3-211ENSMUST00000225438 2310034G01RikA0A286YDL3 209 aa12□□□□□ -0.49
Shroom3-211ENSMUST00000225438 Gm10160F6Y577 67 aa11.99□□□□□ -0.49
Shroom3-211ENSMUST00000225438 Ighv2-5A0A0A6YY69 116 aa11.98□□□□□ -0.49
Shroom3-211ENSMUST00000225438 CrygaP04345 174 aa11.97□□□□□ -0.49
Shroom3-211ENSMUST00000225438 E130208F15RikQ3UPV3 143 aa11.97□□□□□ -0.49
Shroom3-211ENSMUST00000225438 AI606181Q8C7B9 129 aa11.97□□□□□ -0.49
Shroom3-211ENSMUST00000225438 Lrp4Q8VI56 1905 aa11.97□□□□□ -0.49
Shroom3-211ENSMUST00000225438 Dmac1Q9CQ00 111 aa11.96□□□□□ -0.5
Shroom3-211ENSMUST00000225438 MobpQ9D2P8 170 aa11.95□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Gm21886J3QJU9 214 aa11.94□□□□□ -0.5
Shroom3-211ENSMUST00000225438 P01819 144 aa11.94□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Gm12216A0A1W2P827 62 aa11.94□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Defb50Q6TU36 73 aa11.93□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Csdc2Q91YQ3 154 aa11.93□□□□□ -0.5
Shroom3-211ENSMUST00000225438 4930518I15RikQ3V2W7 57 aa11.93□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Gm9903Q8C9Y8 129 aa11.93□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Gm10197F6QEY5 67 aa11.92□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Znf414Q9DCK4 299 aa11.92□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Col27a1Q5QNQ9 1845 aa11.92□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Cdip1Q9DB75 208 aa11.91□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Col4a2P08122 1707 aa11.91□□□□□ -0.5
Shroom3-211ENSMUST00000225438 6430550D23RikE9Q1X6 194 aa11.91□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Elof1P60003 83 aa11.9□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Ighv2-2A0A075B5P8 116 aa11.9□□□□□ -0.5
Shroom3-211ENSMUST00000225438 P01821 116 aa11.9□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Spint4Q9D263 159 aa11.9□□□□□ -0.5
Shroom3-211ENSMUST00000225438 Gm10999F6Q4M4 69 aa11.89□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Gm26661M0QWV4 156 aa11.88□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Defb45Q3V490 66 aa11.87□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Krtap24-1G3X9A2 248 aa11.87□□□□□ -0.51
Shroom3-211ENSMUST00000225438 A930002H24RikQ8C8Y3 163 aa11.87□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Gpr15lA0A0B4J1N3 78 aa11.86□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Snhg11Q4G0K9 87 aa11.86□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Phf5aP83870 110 aaKnown RBP11.86□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Gm44790A0A0N4SV91 103 aa11.85□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Usp9xP70398 2559 aaKnown RBP11.84□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Piezo2Q8CD54 2822 aa11.84□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Sostdc1Q9CQN4 206 aa11.84□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Igkv8-27A0A0G2JF28 120 aa11.83□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Spata3Q9D9T6 193 aa11.83□□□□□ -0.51
Shroom3-211ENSMUST00000225438 Ptpn13Q64512 2453 aa11.83□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Limd2Q8BGB5 128 aa11.8□□□□□ -0.52
Shroom3-211ENSMUST00000225438 4930507D05RikQ8C9C9 103 aa11.8□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Spaca4Q80ZQ0 127 aa11.79□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Psors1c2Q80ZC9 134 aa11.79□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Zfp462B1AWL2 2495 aaKnown RBP11.78□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Prol1E9PYQ4 312 aa11.78□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Gm10837Q3UTT8 145 aa11.77□□□□□ -0.52
Shroom3-211ENSMUST00000225438 Col5a1O88207 1838 aa11.77□□□□□ -0.53
Shroom3-211ENSMUST00000225438 Q8BGJ3 129 aa11.75□□□□□ -0.53
Shroom3-211ENSMUST00000225438 RetnlbQ99P86 105 aa11.75□□□□□ -0.53
Shroom3-211ENSMUST00000225438 Gm10770F7D043 238 aa11.74□□□□□ -0.53
Shroom3-211ENSMUST00000225438 Gm27235Q3UW50 83 aa11.74□□□□□ -0.53
Shroom3-211ENSMUST00000225438 TrrapQ80YV3 2565 aaKnown RBP11.73□□□□□ -0.53
Shroom3-211ENSMUST00000225438 PolqQ8CGS6 2544 aa11.72□□□□□ -0.53
Shroom3-211ENSMUST00000225438 Krtap16-1A2A5X5 502 aa11.71□□□□□ -0.53
Shroom3-211ENSMUST00000225438 Krtap26-1Q9D7N2 215 aa11.7□□□□□ -0.54
Shroom3-211ENSMUST00000225438 Gm10772F7AIG4 85 aa11.69□□□□□ -0.54
Shroom3-211ENSMUST00000225438 Rpl37aP61514 92 aa11.69□□□□□ -0.54
Shroom3-211ENSMUST00000225438 Gm3250E9Q1M3 230 aa11.69□□□□□ -0.54
Shroom3-211ENSMUST00000225438 Gm5617Q91VN2 117 aa11.69□□□□□ -0.54
Shroom3-211ENSMUST00000225438 Gm17689B3GLJ4 109 aa11.68□□□□□ -0.54
Shroom3-211ENSMUST00000225438 AI854703Q8BIN3 203 aa11.68□□□□□ -0.54
Shroom3-211ENSMUST00000225438 A530084C06RikQ3UTW2 186 aa11.68□□□□□ -0.54
Shroom3-211ENSMUST00000225438 AplnQ9R0R4 77 aa11.68□□□□□ -0.54
Shroom3-211ENSMUST00000225438 Q8BT88 171 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms