RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Rhox8Q6VSS7 320 aa30.68■■■□□ 2.5
Shroom3-211ENSMUST00000225438 Rpgrip1Q9EPQ2 1331 aa27.81■■■□□ 2.04
Shroom3-211ENSMUST00000225438 Ehmt2Q9Z148 1263 aaKnown RBP27.41■■□□□ 1.98
Shroom3-211ENSMUST00000225438 Cngb1E1AZ71 1325 aa27.13■■□□□ 1.93
Shroom3-211ENSMUST00000225438 Esf1Q3V1V3 845 aaKnown RBP27.12■■□□□ 1.93
Shroom3-211ENSMUST00000225438 Ccdc136Q3TVA9 1136 aa27.03■■□□□ 1.92
Shroom3-211ENSMUST00000225438 Las1lA2BE28 776 aaKnown RBP26.97■■□□□ 1.91
Shroom3-211ENSMUST00000225438 Wdr66E9Q743 1299 aa26.95■■□□□ 1.9
Shroom3-211ENSMUST00000225438 Ube2uB1AUC4 352 aa26.94■■□□□ 1.9
Shroom3-211ENSMUST00000225438 Zeb1Q64318 1117 aa26.75■■□□□ 1.87
Shroom3-211ENSMUST00000225438 Pelp1Q9DBD5 1123 aaKnown RBP26.68■■□□□ 1.86
Shroom3-211ENSMUST00000225438 Gab3Q8BSM5 595 aa26.63■■□□□ 1.85
Shroom3-211ENSMUST00000225438 Npm2Q80W85 207 aa26.59■■□□□ 1.85
Shroom3-211ENSMUST00000225438 Trim41Q5NCC3 630 aa26.52■■□□□ 1.84
Shroom3-211ENSMUST00000225438 Myt1lP97500 1187 aa26.31■■□□□ 1.8
Shroom3-211ENSMUST00000225438 NischQ80TM9 1593 aa25.76■■□□□ 1.72
Shroom3-211ENSMUST00000225438 UbtfP25976 765 aaKnown RBP25.69■■□□□ 1.7
Shroom3-211ENSMUST00000225438 NefmP08553 848 aa25.65■■□□□ 1.7
Shroom3-211ENSMUST00000225438 Stra8P70278 393 aa25.63■■□□□ 1.69
Shroom3-211ENSMUST00000225438 CenpbP27790 599 aa25.62■■□□□ 1.69
Shroom3-211ENSMUST00000225438 Amer1Q7TS75 1132 aa25.58■■□□□ 1.69
Shroom3-211ENSMUST00000225438 Slc24a1Q91WD8 1130 aa25.51■■□□□ 1.67
Shroom3-211ENSMUST00000225438 Acin1Q9JIX8 1338 aaKnown RBP25.51■■□□□ 1.67
Shroom3-211ENSMUST00000225438 Il27Q8K3I6 234 aa25.34■■□□□ 1.65
Shroom3-211ENSMUST00000225438 Anp32bQ9EST5 272 aaKnown RBP25.06■■□□□ 1.6
Shroom3-211ENSMUST00000225438 HrcG5E8J6 738 aa25■■□□□ 1.59
Shroom3-211ENSMUST00000225438 NrdcQ8BHG1 1161 aa25■■□□□ 1.59
Shroom3-211ENSMUST00000225438 Cdk11bP24788 784 aaKnown RBP24.99■■□□□ 1.59
Shroom3-211ENSMUST00000225438 Fam50aQ9WV03 339 aaKnown RBP24.99■■□□□ 1.59
Shroom3-211ENSMUST00000225438 Neurod1Q60867 357 aa24.94■■□□□ 1.58
Shroom3-211ENSMUST00000225438 Ap3b1Q9Z1T1 1105 aa24.93■■□□□ 1.58
Shroom3-211ENSMUST00000225438 Os9Q8K2C7 672 aa24.9■■□□□ 1.58
Shroom3-211ENSMUST00000225438 Ccdc180J3QNE4 1664 aa24.87■■□□□ 1.57
Shroom3-211ENSMUST00000225438 NclP09405 707 aaKnown RBP24.86■■□□□ 1.57
Shroom3-211ENSMUST00000225438 NeflP08551 543 aa24.82■■□□□ 1.56
Shroom3-211ENSMUST00000225438 4930567H17RikQ3V0K5 233 aa24.81■■□□□ 1.56
Shroom3-211ENSMUST00000225438 Tnnt3Q9QZ47 272 aa24.75■■□□□ 1.55
Shroom3-211ENSMUST00000225438 Ttbk1Q6PCN3 1308 aa24.71■■□□□ 1.55
Shroom3-211ENSMUST00000225438 4933416C03RikQ3V063 378 aa24.7■■□□□ 1.55
Shroom3-211ENSMUST00000225438 Eif5bQ05D44 1216 aaKnown RBP24.67■■□□□ 1.54
Shroom3-211ENSMUST00000225438 Zcchc6Q5BLK4 1491 aaKnown RBP24.66■■□□□ 1.54
Shroom3-211ENSMUST00000225438 Nop58Q6DFW4 536 aaKnown RBP24.65■■□□□ 1.54
Shroom3-211ENSMUST00000225438 Pcgf6Q99NA9 353 aa24.53■■□□□ 1.52
Shroom3-211ENSMUST00000225438 Ppargc1bQ8VHJ7 1014 aa24.48■■□□□ 1.51
Shroom3-211ENSMUST00000225438 TonslQ6NZL6 1363 aa24.47■■□□□ 1.51
Shroom3-211ENSMUST00000225438 Rtl1Q7M732 1744 aa24.42■■□□□ 1.5
Shroom3-211ENSMUST00000225438 Abcc9P70170 1546 aa24.41■■□□□ 1.5
Shroom3-211ENSMUST00000225438 Myt1Q8CFC2 1127 aa24.36■■□□□ 1.49
Shroom3-211ENSMUST00000225438 Zbtb7cQ8VCZ7 619 aa24.28■■□□□ 1.48
Shroom3-211ENSMUST00000225438 Npm1Q61937 292 aaKnown RBP24.24■■□□□ 1.47
Shroom3-211ENSMUST00000225438 Gm35339A0A140LHH9 1649 aa24.24■■□□□ 1.47
Shroom3-211ENSMUST00000225438 Gm13697A2AK42 830 aa24.2■■□□□ 1.46
Shroom3-211ENSMUST00000225438 Hnrnpul2Q00PI9 745 aaKnown RBP24.19■■□□□ 1.46
Shroom3-211ENSMUST00000225438 Lmod2Q3UHZ5 550 aa24.17■■□□□ 1.46
Shroom3-211ENSMUST00000225438 Supt5hO55201 1082 aaKnown RBP24.14■■□□□ 1.46
Shroom3-211ENSMUST00000225438 Mier1Q5UAK0 511 aa24.14■■□□□ 1.45
Shroom3-211ENSMUST00000225438 Rtl5Q5DTT4 599 aa24.06■■□□□ 1.44
Shroom3-211ENSMUST00000225438 Ifnlr1Q8CGK5 535 aa24.01■■□□□ 1.43
Shroom3-211ENSMUST00000225438 Chic1Q8CBW7 227 aa24■■□□□ 1.43
Shroom3-211ENSMUST00000225438 Plekhg3Q4VAC9 1341 aa23.99■■□□□ 1.43
Shroom3-211ENSMUST00000225438 Atp1b4Q99ME6 356 aa23.94■■□□□ 1.42
Shroom3-211ENSMUST00000225438 Erich6D3Z6S9 713 aa23.93■■□□□ 1.42
Shroom3-211ENSMUST00000225438 Nlrp6Q91WS2 869 aa23.91■■□□□ 1.42
Shroom3-211ENSMUST00000225438 Zbtb4Q5F293 982 aa23.9■■□□□ 1.42
Shroom3-211ENSMUST00000225438 ClspnQ80YR7 1315 aa23.84■■□□□ 1.41
Shroom3-211ENSMUST00000225438 Hdac5Q9Z2V6 1113 aa23.78■■□□□ 1.4
Shroom3-211ENSMUST00000225438 Gm13695A2AK44 830 aa23.77■■□□□ 1.4
Shroom3-211ENSMUST00000225438 Prdm10Q3UTQ7 1184 aa23.75■■□□□ 1.39
Shroom3-211ENSMUST00000225438 Anp32aO35381 247 aa23.73■■□□□ 1.39
Shroom3-211ENSMUST00000225438 Polr3glQ8R0C0 218 aa23.73■■□□□ 1.39
Shroom3-211ENSMUST00000225438 DaxxO35613 739 aa23.7■■□□□ 1.38
Shroom3-211ENSMUST00000225438 Fkbp15Q6P9Q6 1216 aaKnown RBP23.66■■□□□ 1.38
Shroom3-211ENSMUST00000225438 Mapk8ip2Q9ERE9 830 aa23.6■■□□□ 1.37
Shroom3-211ENSMUST00000225438 Eid3Q3V124 375 aa23.57■■□□□ 1.36
Shroom3-211ENSMUST00000225438 DiexfQ8BTT6 772 aaKnown RBP23.52■■□□□ 1.36
Shroom3-211ENSMUST00000225438 Clip1Q922J3 1391 aa23.51■■□□□ 1.35
Shroom3-211ENSMUST00000225438 Plppr3Q7TPB0 716 aa23.46■■□□□ 1.35
Shroom3-211ENSMUST00000225438 Ccer2J3QPU5 274 aa23.45■■□□□ 1.34
Shroom3-211ENSMUST00000225438 ArxO35085 564 aa23.45■■□□□ 1.34
Shroom3-211ENSMUST00000225438 Brd4Q9ESU6 1400 aaKnown RBP23.41■■□□□ 1.34
Shroom3-211ENSMUST00000225438 Csrnp3P59055 597 aa23.35■■□□□ 1.33
Shroom3-211ENSMUST00000225438 Ubl4bQ9CQ84 188 aa23.28■■□□□ 1.32
Shroom3-211ENSMUST00000225438 Rangap1P46061 589 aaKnown RBP23.27■■□□□ 1.32
Shroom3-211ENSMUST00000225438 Upf2A2AT37 1269 aaKnown RBP23.26■■□□□ 1.31
Shroom3-211ENSMUST00000225438 Chic2Q9D9G3 165 aa23.21■■□□□ 1.31
Shroom3-211ENSMUST00000225438 Sall2Q9QX96 1004 aa23.2■■□□□ 1.3
Shroom3-211ENSMUST00000225438 Clstn2Q9ER65 966 aa23.19■■□□□ 1.3
Shroom3-211ENSMUST00000225438 Rad21Q61550 635 aaKnown RBP23.18■■□□□ 1.3
Shroom3-211ENSMUST00000225438 Gm38655A0A286YDK6 273 aa23.17■■□□□ 1.3
Shroom3-211ENSMUST00000225438 Cep164Q5DU05 1446 aa23.16■■□□□ 1.3
Shroom3-211ENSMUST00000225438 Abcc8B2RUS7 1588 aa23.14■■□□□ 1.29
Shroom3-211ENSMUST00000225438 Calr4Q3TQS0 420 aa23.13■■□□□ 1.29
Shroom3-211ENSMUST00000225438 Safb2Q80YR5 991 aaKnown RBP23.13■■□□□ 1.29
Shroom3-211ENSMUST00000225438 Ppp4r2Q0VGB7 417 aa23.11■■□□□ 1.29
Shroom3-211ENSMUST00000225438 Anks4bQ8K3X6 423 aa23.09■■□□□ 1.29
Shroom3-211ENSMUST00000225438 Hsp90aa1P07901 733 aaKnown RBP23.07■■□□□ 1.28
Shroom3-211ENSMUST00000225438 Mrs2Q5NCE8 434 aa23.06■■□□□ 1.28
Shroom3-211ENSMUST00000225438 BlmO88700 1416 aa23.04■■□□□ 1.28
Shroom3-211ENSMUST00000225438 Fgd1P52734 960 aa23.03■■□□□ 1.28
Shroom3-211ENSMUST00000225438 CatipB9EKE5 520 aa23.01■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms