RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Hbb-b2P02089 147 aa9.23□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Xcl1P47993 114 aa9.23□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Prss58Q8BW11 241 aa9.23□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Dnal4Q9DCM4 105 aa9.23□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Trbv13-2A0A140T8N6 113 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Gm3618D3Z4P5 127 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Igkv1-99F6XWB2 120 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Defa20Q45VN2 95 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 9430069I07RikQ9CX21 111 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Gm2916Q9D9B9 127 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Gm43218A0A0G2JGT0 114 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 MobpQ9D2P8 170 aa9.21□□□□□ -0.93
Rnf4-204ENSMUST00000182047 Trav13-2A0A075B649 110 aa9.21□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Defb50Q6TU36 73 aa9.21□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Tm2d2Q8R0I4 213 aa9.21□□□□□ -0.94
Rnf4-204ENSMUST00000182047 2010109I03RikQ9CQ11 111 aa9.21□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Klk11Q9QYN3 276 aa9.21□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Gm16381A0A1Y7VKT9 73 aa9.2□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Rpl28P41105 137 aaKnown RBP9.2□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Mzt1Q8BUR9 78 aa9.2□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Defa4P28311 92 aa9.2□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Defa7P50705 93 aa9.2□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Gm10549Q3URY4 149 aa9.2□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Zfand2aQ9JII7 171 aa9.18□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Dnah3Q8BW94 4083 aa9.18□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Naa38Q9D2U5 125 aa9.18□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Igkv2-109A0A075B5K6 120 aa9.17□□□□□ -0.94
Rnf4-204ENSMUST00000182047 SmcpP15265 143 aa9.17□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Odf3l2Q3TZ65 277 aa9.17□□□□□ -0.94
Rnf4-204ENSMUST00000182047 SvipQ3UZP4 77 aa9.17□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Klk9Q32M27 251 aa9.16□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Klk12B2RVZ0 247 aa9.16□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Zfp951A0A087WRH0 451 aa9.15□□□□□ -0.94
Rnf4-204ENSMUST00000182047 MifP34884 115 aaKnown RBP9.15□□□□□ -0.94
Rnf4-204ENSMUST00000182047 ScxQ64124 207 aa9.15□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Rpl39lQ9CQD0 51 aa9.15□□□□□ -0.94
Rnf4-204ENSMUST00000182047 Hist1h4aP62806 103 aaKnown RBP9.15□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Spata3Q9D9T6 193 aa9.15□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Defa21Q8C1P2 93 aa9.14□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Gm5142Q8C5X9 133 aa9.14□□□□□ -0.95
Rnf4-204ENSMUST00000182047 6430550D23RikE9Q1X6 194 aa9.14□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Cystm1Q8K353 104 aa9.13□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Wfdc12Q9JHY3 85 aa9.13□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Smim26Q3V460 107 aa9.12□□□□□ -0.95
Rnf4-204ENSMUST00000182047 4930519P11RikQ9CUJ8 166 aa9.12□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Dnah7bL7N1Y0 4068 aa9.12□□□□□ -0.95
Rnf4-204ENSMUST00000182047 1810062G17RikG3X8Y2 129 aa9.11□□□□□ -0.95
Rnf4-204ENSMUST00000182047 7530416G11RikJ3QJX6 159 aa9.11□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Ighv2-9-1A0A075B697 116 aa9.11□□□□□ -0.95
Rnf4-204ENSMUST00000182047 MplkipQ9D011 178 aa9.11□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Acyp1P56376 99 aa9.1□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Igkv3-9A0A140T8P4 119 aa9.09□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Ifitm6A0A1B0GS75 124 aa9.09□□□□□ -0.95
Rnf4-204ENSMUST00000182047 Ighv8-13A0A075B5Y0 101 aa9.08□□□□□ -0.96
Rnf4-204ENSMUST00000182047 4930518I15RikQ3V2W7 57 aa9.08□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Znf414Q9DCK4 299 aa9.08□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Sslp1Q3UN54 99 aa9.08□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Trav9n-4A0A075B631 113 aa9.07□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Igkv8-16A0A0G2JDG9 121 aa9.07□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Igkv4-58A0A0G2JGI6 119 aa9.07□□□□□ -0.96
Rnf4-204ENSMUST00000182047 TnxbO35452 4006 aa9.07□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Ighv1-56A0A0A6YXG2 117 aa9.06□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Krtap11-1E9Q2E9 183 aa9.06□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Gm10518F6UQQ9 182 aa9.06□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Igkv8-34A0A0G2JDU0 121 aa9.06□□□□□ -0.96
Rnf4-204ENSMUST00000182047 E130218I03RikA0A0U1RNU5 63 aa9.06□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Snhg11Q4G0K9 87 aa9.06□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Scgb1b2O35176 93 aa9.05□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Igkv8-18A0A0B4J1J3 123 aa9.05□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Gm10845Q3UNY9 185 aa9.05□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Tmem86bQ497J1 226 aa9.05□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Defa23Q5G866 93 aa9.05□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Tmem223Q9CQE2 199 aaKnown RBP9.05□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Tmem243B2RVB9 118 aa9.04□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Rpl18aP62717 176 aaKnown RBP9.04□□□□□ -0.96
Rnf4-204ENSMUST00000182047 C530025M09RikF6RGA8 229 aa9.04□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Psors1c2Q80ZC9 134 aa9.04□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Igkv8-24A0A140T8P5 121 aa9.04□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Fam19a1Q7TPG8 133 aa9.04□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Gm10320E9PW43 113 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Reg3dQ9QUS9 175 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Csmd3Q80T79 3707 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Igkv3-1A0A075B5P1 119 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Gm5153P01627 120 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Sprr1bQ62267 153 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 EnhoQ8K1D8 76 aa9.03□□□□□ -0.96
Rnf4-204ENSMUST00000182047 Q9DAA7 145 aa9.02□□□□□ -0.96
Rnf4-204ENSMUST00000182047 A0A286YCN5 57 aa9.02□□□□□ -0.97
Rnf4-204ENSMUST00000182047 AplnQ9R0R4 77 aa9.01□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Dnah17Q69Z23 4481 aa9.01□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Reg3bP35230 175 aa9.01□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Csdc2Q91YQ3 154 aa9.01□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Pkd1l1Q8R526 2615 aa9□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Tmem254aP0DN89 123 aa9□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Tmem254bP0DN90 123 aa9□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Tmem254cP0DN91 123 aa9□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Ighv13-2A0A0A6YWN3 119 aa8.99□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Fam229bQ8CF36 80 aa8.99□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Gm9508A0A1W2P7W0 230 aa8.98□□□□□ -0.97
Rnf4-204ENSMUST00000182047 Gm16181B0V2H2 73 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 128.8 ms