RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 AcanQ61282 2132 aaKnown RBP4.59□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Msrb1Q9JLC3 116 aa4.59□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm9887F6RFI0 207 aa4.58□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Cox6a2P43023 97 aa4.58□□□□□ -1.68
Scn1a-201ENSMUST00000077489 6430550D23RikE9Q1X6 194 aa4.58□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm26661M0QWV4 156 aa4.58□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Coa6Q8BGD8 79 aa4.58□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Krtap26-1Q9D7N2 215 aa4.57□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Elof1P60003 83 aa4.57□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Crip2Q9DCT8 208 aaKnown RBP4.57□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Mrpl34Q99N91 92 aa4.57□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Limd2Q8BGB5 128 aa4.56□□□□□ -1.68
Scn1a-201ENSMUST00000077489 TectaO08523 2155 aa4.56□□□□□ -1.68
Scn1a-201ENSMUST00000077489 CrygaP04345 174 aa4.56□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Dmac1Q9CQ00 111 aa4.56□□□□□ -1.68
Scn1a-201ENSMUST00000077489 E130208F15RikQ3UPV3 143 aa4.56□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Nav2E9Q842 2432 aa4.56□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm16181B0V2H2 73 aa4.55□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm17606F6ZL36 78 aa4.55□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Eif4ebp3Q80VV3 101 aa4.55□□□□□ -1.68
Scn1a-201ENSMUST00000077489 MobpQ9D2P8 170 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Abca2P41234 2434 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm10837Q3UTT8 145 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Spint4Q9D263 159 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 1600014C23RikQ9DAX4 101 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Flg2Q2VIS4 2362 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm10160F6Y577 67 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 A730009L09RikA0A1B0GS82 72 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Gm10643Q3URG9 111 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Ly6g6cQ9Z1Q4 126 aa4.54□□□□□ -1.68
Scn1a-201ENSMUST00000077489 SnurfQ9WU12 71 aa4.53□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Reg3aO09037 175 aa4.53□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Wfdc3Q14AE4 130 aa4.53□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Wfdc17Q5SSJ1 76 aa4.53□□□□□ -1.68
Scn1a-201ENSMUST00000077489 Prol1E9PYQ4 312 aa4.52□□□□□ -1.69
Scn1a-201ENSMUST00000077489 2310034G01RikA0A286YDL3 209 aa4.52□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Krtap16-1A2A5X5 502 aa4.52□□□□□ -1.69
Scn1a-201ENSMUST00000077489 AW011738F6S7Q2 159 aa4.52□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm10308Q9CVR5 141 aa4.51□□□□□ -1.69
Scn1a-201ENSMUST00000077489 C2cd3Q52KB6 2323 aa4.51□□□□□ -1.69
Scn1a-201ENSMUST00000077489 4930519P11RikQ9CUJ8 166 aa4.51□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm10197F6QEY5 67 aa4.5□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Igkv8-27A0A0G2JF28 120 aa4.5□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm12216A0A1W2P827 62 aa4.5□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Bean1Q9EQG5 255 aa4.5□□□□□ -1.69
Scn1a-201ENSMUST00000077489 1700018G05RikA0A1B0GSI2 66 aa4.49□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Zfp462B1AWL2 2495 aaKnown RBP4.48□□□□□ -1.69
Scn1a-201ENSMUST00000077489 4930507D05RikQ8C9C9 103 aa4.48□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm10300Q8C8P7 189 aa4.48□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Defb11Q8R2I7 77 aa4.48□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Snhg11Q4G0K9 87 aa4.47□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Defb38Q7TNV7 63 aa4.47□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm27235Q3UW50 83 aa4.47□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Sostdc1Q9CQN4 206 aa4.47□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Prr13Q9CQJ5 137 aa4.47□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Znf414Q9DCK4 299 aa4.47□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm21886J3QJU9 214 aa4.46□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Gm10642Q3TWM1 71 aa4.46□□□□□ -1.69
Scn1a-201ENSMUST00000077489 Spata3Q9D9T6 193 aa4.46□□□□□ -1.69
Scn1a-201ENSMUST00000077489 BC067074F6RXI4 2391 aa4.46□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Defb39Q70KL3 74 aa4.46□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm10772F7AIG4 85 aa4.45□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Kiaa1549Q68FD9 1940 aa4.45□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm17689B3GLJ4 109 aa4.44□□□□□ -1.7
Scn1a-201ENSMUST00000077489 AI606181Q8C7B9 129 aa4.44□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Tet1Q3URK3 2007 aaKnown RBP4.44□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm20661K7N787 53 aa4.44□□□□□ -1.7
Scn1a-201ENSMUST00000077489 A530084C06RikQ3UTW2 186 aa4.44□□□□□ -1.7
Scn1a-201ENSMUST00000077489 A930002H24RikQ8C8Y3 163 aa4.44□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm44790A0A0N4SV91 103 aa4.43□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Defb37Q7TMD2 62 aa4.43□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm10770F7D043 238 aa4.43□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Rpl37aP61514 92 aa4.43□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm10999F6Q4M4 69 aa4.42□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Krtap24-1G3X9A2 248 aa4.42□□□□□ -1.7
Scn1a-201ENSMUST00000077489 AI854703Q8BIN3 203 aa4.42□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Cdc42se1Q8BHL7 80 aa4.42□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Phf5aP83870 110 aaKnown RBP4.41□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Sprr1bQ62267 153 aa4.41□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Coa5Q99M07 74 aa4.41□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Gm7276Q3TYW4 209 aa4.4□□□□□ -1.7
Scn1a-201ENSMUST00000077489 Defb50Q6TU36 73 aa4.4□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Hivep2Q3UHF7 2430 aa4.4□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Bdp1Q571C7 2467 aa4.39□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Uqcr11Q9CPX8 56 aa4.39□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Zfhx2Q2MHN3 2562 aa4.39□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Q8BGJ3 129 aa4.38□□□□□ -1.71
Scn1a-201ENSMUST00000077489 7530416G11RikJ3QJX6 159 aa4.38□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Gm3285A0A1W2P7U0 201 aa4.38□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Gpr15lA0A0B4J1N3 78 aa4.38□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Gm20538F6Z9R1 75 aa4.38□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Q8BT88 171 aa4.38□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Mp68P56379 58 aa4.37□□□□□ -1.71
Scn1a-201ENSMUST00000077489 AplnQ9R0R4 77 aa4.37□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Phxr4P15974 95 aa4.36□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Myo9aQ8C170 2542 aa4.36□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Dmbt1Q60997 2085 aa4.36□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Alms1Q8K4E0 3251 aa4.36□□□□□ -1.71
Scn1a-201ENSMUST00000077489 Sprr4Q8CGN8 76 aa4.35□□□□□ -1.71
Scn1a-201ENSMUST00000077489 AY074887Q8R5F9 132 aa4.34□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 101.8 ms