RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Ndufb1P0DN34 57 aa11.71□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Crip2Q9DCT8 208 aaKnown RBP11.71□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 Lama2Q60675 3118 aaKnown RBP11.7□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 P84750 121 aa11.7□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 H2al1aQ5M8Q2 105 aa11.7□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 H2al1eQ810S6 105 aa11.7□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 NpwA0A1L1STR8 176 aa11.7□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 A830031A19RikQ8BNT5 113 aa11.69□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 Ly6g6cQ9Z1Q4 126 aa11.69□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 C130032M10RikQ8C888 123 aa11.67□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 Col4a2P08122 1707 aa11.67□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 Usp9yF8VPU6 2556 aa11.67□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 Gm19935A0A1B0GSF9 52 aa11.66□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 Gm10267M0QWD8 85 aa11.65□□□□□ -0.54
Ubfd1-201ENSMUST00000033158 TrioQ0KL02 3102 aa11.64□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Gm43218A0A0G2JGT0 114 aa11.63□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Adm2Q7TNK8 150 aa11.63□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 1700074P13RikQ9D9G7 251 aa11.62□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Defb38Q7TNV7 63 aa11.61□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Ntn5Q3UQ22 452 aa11.61□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Q9DAA7 145 aa11.6□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 1600014C23RikQ9DAX4 101 aa11.6□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Igkv8-28A0A0G2JE47 121 aa11.59□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Apoc4Q61268 124 aa11.59□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Ighv1-56A0A0A6YXG2 117 aa11.59□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 CrygaP04345 174 aa11.58□□□□□ -0.55
Ubfd1-201ENSMUST00000033158 Cd164Q9R0L9 197 aa11.58□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Wfdc3Q14AE4 130 aa11.57□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Gm9887F6RFI0 207 aa11.57□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Defb45Q3V490 66 aa11.55□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 MobpQ9D2P8 170 aa11.55□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Cdip1Q9DB75 208 aa11.55□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Col5a1O88207 1838 aa11.55□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Serp1Q9Z1W5 66 aa11.55□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Ankrd11E9Q4F7 2643 aa11.53□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Gm16181B0V2H2 73 aa11.53□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 UqcrqQ9CQ69 82 aa11.53□□□□□ -0.56
Ubfd1-201ENSMUST00000033158 Gm28230A0A0A0MQ91 144 aa11.52□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 CicQ924A2 2510 aa11.52□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Hcfc1Q61191 2045 aaKnown RBP11.52□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Zfp292Q9Z2U2 2698 aa11.52□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 A730009L09RikA0A1B0GS82 72 aa11.51□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 9230102O04RikA2ASX7 82 aa11.51□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Igkv3-7A0A0G2JE31 119 aa11.51□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Wfdc6bF6ULY1 148 aa11.51□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Gm10337F7DEP7 55 aa11.51□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 FlnbQ80X90 2602 aaKnown RBP11.5□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Gm26661M0QWV4 156 aa11.48□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 H2al1mQ9DAD9 105 aa11.48□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 P01819 144 aa11.48□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Wfdc17Q5SSJ1 76 aa11.47□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Sostdc1Q9CQN4 206 aa11.47□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Krtap26-1Q9D7N2 215 aa11.47□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Cep350E9Q309 3095 aa11.47□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Krtap24-1G3X9A2 248 aa11.47□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Defb37Q7TMD2 62 aa11.47□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 Gm28374F6SG70 93 aa11.46□□□□□ -0.57
Ubfd1-201ENSMUST00000033158 SnurfQ9WU12 71 aa11.45□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Cox6a2P43023 97 aa11.44□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Reg3aO09037 175 aa11.44□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Csdc2Q91YQ3 154 aa11.43□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Ighv2-5A0A0A6YY69 116 aa11.43□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Gm11627A6PWP4 55 aa11.43□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Msrb1Q9JLC3 116 aa11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 FasnP19096 2504 aaKnown RBP11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 E130208F15RikQ3UPV3 143 aa11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Coa6Q8BGD8 79 aa11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 4930519P11RikQ9CUJ8 166 aa11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Nbeal1E9PYP2 2688 aa11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Defb39Q70KL3 74 aa11.42□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Cep192E9Q4Y4 2514 aaKnown RBP11.41□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 H2al1kJ3QP08 105 aa11.41□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Dnah12Q3V0Q1 3086 aa11.4□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Chchd10Q7TNL9 138 aa11.4□□□□□ -0.58
Ubfd1-201ENSMUST00000033158 Mrpl34Q99N91 92 aa11.39□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Gm10570F6VB42 170 aa11.38□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Gm3250E9Q1M3 230 aa11.38□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Gm9903Q8C9Y8 129 aa11.37□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Psors1c2Q80ZC9 134 aa11.37□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Dmac1Q9CQ00 111 aa11.36□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Igkv8-19A0A0G2JFN8 121 aa11.35□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 1700018G05RikA0A1B0GSI2 66 aa11.35□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 4930518I15RikQ3V2W7 57 aa11.35□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Fam19a3Q7TPG6 132 aa11.35□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Lama3Q61789 3330 aa11.34□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Elof1P60003 83 aa11.34□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Ighv2-2A0A075B5P8 116 aa11.34□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Gm21886J3QJU9 214 aa11.34□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 P01821 116 aa11.34□□□□□ -0.59
Ubfd1-201ENSMUST00000033158 Snhg11Q4G0K9 87 aa11.33□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 Igkv8-27A0A0G2JF28 120 aa11.33□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 Ankrd17Q99NH0 2603 aaKnown RBP11.32□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 Gm10772F7AIG4 85 aa11.32□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 Gm10642Q3TWM1 71 aa11.32□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 2310034G01RikA0A286YDL3 209 aa11.3□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 CenpfE9Q3P4 2997 aaKnown RBP11.29□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 AI854703Q8BIN3 203 aa11.29□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 Defb11Q8R2I7 77 aa11.29□□□□□ -0.6
Ubfd1-201ENSMUST00000033158 6430550D23RikE9Q1X6 194 aa11.27□□□□□ -0.61
Ubfd1-201ENSMUST00000033158 Gm7173A0A0G2JEB6 3132 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms