RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Prr9Q8BV84 116 aa6.5□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm10160F6Y577 67 aa6.5□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm26661M0QWV4 156 aa6.49□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Cd164Q9R0L9 197 aa6.49□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Adm2Q7TNK8 150 aa6.49□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm11627A6PWP4 55 aa6.48□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm26566Q8CAC1 153 aa6.48□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm10135F6TEE5 83 aa6.48□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Crip2Q9DCT8 208 aaKnown RBP6.48□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Wisp2Q9Z0G4 251 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Pkd1l2Q7TN88 2461 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Cox6a2P43023 97 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm12216A0A1W2P827 62 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 CdsnQ7TPC1 561 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Krtap16-1A2A5X5 502 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Gm16181B0V2H2 73 aa6.47□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Chd8Q09XV5 2582 aaKnown RBP6.46□□□□□ -1.37
Ccdc47-201ENSMUST00000002043 Adamts20P59511 1906 aa6.46□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Wfdc17Q5SSJ1 76 aa6.46□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Cdip1Q9DB75 208 aa6.46□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Bri3P28662 125 aa6.45□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Defb10Q8R2I8 73 aa6.45□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 4930518I15RikQ3V2W7 57 aa6.45□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Ly6g6cQ9Z1Q4 126 aa6.45□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Bean1Q9EQG5 255 aa6.45□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 SnurfQ9WU12 71 aa6.45□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Gm10197F6QEY5 67 aa6.44□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Usp9xP70398 2559 aaKnown RBP6.44□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Zfp462B1AWL2 2495 aaKnown RBP6.44□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Defb2P82020 71 aa6.44□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Msrb1Q9JLC3 116 aa6.44□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Mrpl34Q99N91 92 aa6.43□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Ptpn13Q64512 2453 aa6.43□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 CrygaP04345 174 aa6.42□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Defb38Q7TNV7 63 aa6.42□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Spink13Q3UTS8 97 aa6.42□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 4930507D05RikQ8C9C9 103 aa6.42□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Dmac1Q9CQ00 111 aa6.42□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 2310034G01RikA0A286YDL3 209 aa6.41□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Srsf12Q8C8K3 266 aa6.41□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 MobpQ9D2P8 170 aa6.41□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Reg3aO09037 175 aa6.4□□□□□ -1.38
Ccdc47-201ENSMUST00000002043 Tns1E9Q0S6 1888 aaKnown RBP6.39□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 PtprbB2RU80 1998 aa6.39□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Elof1P60003 83 aa6.39□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Defb45Q3V490 66 aa6.39□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Gm21886J3QJU9 214 aa6.38□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Gm9573F7C950 1606 aa6.37□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Wfdc3Q14AE4 130 aa6.37□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 1600014C23RikQ9DAX4 101 aa6.37□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Flg2Q2VIS4 2362 aa6.36□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Prol1E9PYQ4 312 aa6.36□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Gm10643Q3URG9 111 aa6.36□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 4930519P11RikQ9CUJ8 166 aa6.36□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Krtap26-1Q9D7N2 215 aa6.35□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Gm10308Q9CVR5 141 aa6.35□□□□□ -1.39
Ccdc47-201ENSMUST00000002043 Mp68P56379 58 aa6.33□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 E130208F15RikQ3UPV3 143 aa6.33□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Q8BGJ3 129 aa6.33□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Sptbn4E9PX29 2561 aa6.33□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Cdc42se1Q8BHL7 80 aa6.33□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 A530084C06RikQ3UTW2 186 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Znf414Q9DCK4 299 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 A930002H24RikQ8C8Y3 163 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 UtrnE9Q6R7 3430 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Setd2E9Q5F9 2537 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Igkv8-27A0A0G2JF28 120 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Defb39Q70KL3 74 aa6.32□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 A730009L09RikA0A1B0GS82 72 aa6.31□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Gm20538F6Z9R1 75 aa6.31□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Defb50Q6TU36 73 aa6.31□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 AW011738F6S7Q2 159 aa6.31□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Gm17689B3GLJ4 109 aa6.3□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 1700018G05RikA0A1B0GSI2 66 aa6.29□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Defb11Q8R2I7 77 aa6.29□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 AI606181Q8C7B9 129 aa6.29□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Sostdc1Q9CQN4 206 aa6.28□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Gm27235Q3UW50 83 aa6.28□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 TrrapQ80YV3 2565 aaKnown RBP6.28□□□□□ -1.4
Ccdc47-201ENSMUST00000002043 Rpl37aP61514 92 aa6.27□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Uqcr11Q9CPX8 56 aa6.27□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Pcsk5Q04592 1877 aa6.27□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gm44790A0A0N4SV91 103 aa6.27□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gm10999F6Q4M4 69 aa6.26□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Spata3Q9D9T6 193 aa6.26□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Lrp4Q8VI56 1905 aa6.26□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gm10300Q8C8P7 189 aa6.26□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gm10642Q3TWM1 71 aa6.25□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Col4a4Q9QZR9 1682 aa6.25□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Golgb1E9PVZ8 3238 aa6.25□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gm20661K7N787 53 aa6.24□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Phxr4P15974 95 aa6.24□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Defb37Q7TMD2 62 aa6.24□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 AplnQ9R0R4 77 aa6.23□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gm10770F7D043 238 aa6.22□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 Gpr15lA0A0B4J1N3 78 aa6.21□□□□□ -1.41
Ccdc47-201ENSMUST00000002043 AI854703Q8BIN3 203 aa6.21□□□□□ -1.42
Ccdc47-201ENSMUST00000002043 Col5a1O88207 1838 aa6.21□□□□□ -1.42
Ccdc47-201ENSMUST00000002043 Coa5Q99M07 74 aa6.2□□□□□ -1.42
Ccdc47-201ENSMUST00000002043 Kiaa1549Q68FD9 1940 aa6.2□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms