RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 PolP10400 120 aa16.29■□□□□ 0.2
Ssbp4-205ENSMUST00000210369 Gm26602M0QWA4 95 aa16.28■□□□□ 0.2
Ssbp4-205ENSMUST00000210369 Defa13P50711 93 aa16.28■□□□□ 0.2
Ssbp4-205ENSMUST00000210369 Trav13n-1A0A0G2JEU8 110 aa16.27■□□□□ 0.2
Ssbp4-205ENSMUST00000210369 Trav13-4-dv7A0A075B6C2 110 aa16.26■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Igkv8-34A0A0G2JDU0 121 aa16.26■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Tspan13Q9D8C2 204 aa16.26■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Trav11A0A0B4J1J9 114 aa16.26■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Gm16181B0V2H2 73 aa16.26■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Notch1Q01705 2531 aa16.25■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 HilpdaQ9JLS0 64 aa16.25■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Cd33Q63994 403 aa16.24■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Cryba4Q9JJV0 196 aa16.24■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Glrp1E9Q9S8 174 aa16.24■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 CckP09240 115 aa16.23■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Prp2P05143 317 aa16.22■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 MturnQ8CGA4 131 aa16.22■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Trav13d-4A0A0G2JFX3 110 aa16.22■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Igkv6-13A0A0G2JGY3 119 aa16.22■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Gm10577Q3UDV9 132 aa16.22■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Krtap10-10A0A1W2P7T6 217 aa16.21■□□□□ 0.19
Ssbp4-205ENSMUST00000210369 Mtatp8P03930 67 aa16.2■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Dnah14A0A140LIJ4 4489 aa16.2■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Pkd1l1Q8R526 2615 aa16.2■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Mzt1Q8BUR9 78 aa16.19■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Rpl32-psP17932 135 aa16.19■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Gm4861Q8C5A4 106 aa16.19■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Gm26727M0QWT1 121 aa16.18■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Rpl13aP19253 203 aaKnown RBP16.18■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 PemtQ61907 199 aa16.18■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Gm17349F7BGH6 99 aa16.17■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Defb50Q6TU36 73 aa16.17■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Slamf6Q9ET39 351 aa16.16■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Igkv3-1A0A075B5P1 119 aa16.15■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Trav9n-4A0A075B631 113 aa16.15■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 MrapQ9D159 127 aa16.15■□□□□ 0.18
Ssbp4-205ENSMUST00000210369 Rab37Q9JKM7 223 aa16.14■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 4930415O20RikQ8CDT5 131 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Trav9d-4A0A0G2JG37 103 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Defa3P28310 93 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Defa10P50708 93 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Defa15P50713 93 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Snhg11Q4G0K9 87 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Tenm2Q9WTS5 2764 aa16.12■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 1700011M02RikB1AX35 88 aa16.11■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 AW011738F6S7Q2 159 aa16.11■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Lage3Q9CR70 148 aa16.11■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Spink13Q3UTS8 97 aa16.1■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 E130208F15RikQ3UPV3 143 aa16.1■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 SpinklQ8CEK3 90 aa16.1■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Tmem86bQ497J1 226 aa16.09■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 AplnQ9R0R4 77 aa16.09■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Muc6Q80T03 2850 aa16.09■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 NrepQ07475 68 aa16.08■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Cox11Q6P8I6 275 aa16.08■□□□□ 0.17
Ssbp4-205ENSMUST00000210369 Cks1bP61025 79 aa16.08■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Sostdc1Q9CQN4 206 aa16.07■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Dnah3Q8BW94 4083 aa16.06■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Trav13-1A0A075B644 110 aa16.06■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Prss58Q8BW11 241 aa16.06■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 EnhoQ8K1D8 76 aa16.06■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 2010109I03RikQ9CQ11 111 aa16.06■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Tcl1b5P56845 121 aa16.05■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Vps25Q9CQ80 176 aa16.05■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Gm11213A0A1B0GR83 88 aa16.05■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 P01755 137 aa16.05■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 4930544G11RikQ9CR99 193 aa16.05■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Gm11020F6ZGD5 61 aa16.04■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Lst1O08843 95 aa16.04■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Gm26920S4R2A5 56 aa16.04■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Gm867A0A1W2P7T4 151 aa16.03■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Sslp1Q3UN54 99 aa16.03■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Pxt1Q8K459 51 aa16.03■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Wdr38Q9D994 303 aa16.03■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Reg3bP35230 175 aa16.03■□□□□ 0.16
Ssbp4-205ENSMUST00000210369 Krtap11-1E9Q2E9 183 aa16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 MalO09198 153 aa16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Prh1P05142 261 aa16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Hint1P70349 126 aaKnown RBP16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Bles03Q8VD62 251 aa16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Tcl1b3P56842 122 aa16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Gm10549Q3URY4 149 aa16.01■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Ighv1-56A0A0A6YXG2 117 aa16■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Zc2hc1bQ9D534 172 aa16■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 FasnP19096 2504 aaKnown RBP16■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Gm10647E9Q8X0 124 aa15.99■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 P01896 185 aa15.99■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Ighv2-9A0A075B5Q5 116 aa15.98■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Cited1P97769 203 aa15.98■□□□□ 0.15
Ssbp4-205ENSMUST00000210369 Gm9903Q8C9Y8 129 aa15.96■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Gm5617Q91VN2 117 aa15.96■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Try10Q792Z1 246 aaKnown RBP15.95■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Dppa2Q9CWH0 301 aa15.95■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Phpt1Q9DAK9 124 aa15.95■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Ly6hQ9WUC3 139 aa15.95■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Cox6cQ9CPQ1 76 aa15.94■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Pfn2Q9JJV2 140 aa15.94■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 B230359F08RikA0A0B4J1K3 109 aa15.94■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Defb47Q30KN1 79 aa15.93■□□□□ 0.14
Ssbp4-205ENSMUST00000210369 Igkv8-24A0A140T8P5 121 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms