RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 Gm35339A0A140LHH9 1649 aa48.89■■■■■ 5.42
Ssbp4-205ENSMUST00000210369 NischQ80TM9 1593 aa48.7■■■■■ 5.39
Ssbp4-205ENSMUST00000210369 Abcc9P70170 1546 aa47.36■■■■■ 5.17
Ssbp4-205ENSMUST00000210369 Abcc8B2RUS7 1588 aa46.68■■■■■ 5.06
Ssbp4-205ENSMUST00000210369 ScribQ80U72 1612 aa44.83■■■■■ 4.77
Ssbp4-205ENSMUST00000210369 Rhox8Q6VSS7 320 aa43.7■■■■■ 4.59
Ssbp4-205ENSMUST00000210369 Dcaf1Q80TR8 1506 aa43.56■■■■■ 4.56
Ssbp4-205ENSMUST00000210369 NacadQ5SWP3 1504 aa43.49■■■■■ 4.55
Ssbp4-205ENSMUST00000210369 Kdm5dQ62240 1548 aa43.44■■■■■ 4.54
Ssbp4-205ENSMUST00000210369 Rtl1Q7M732 1744 aa43.05■■■■■ 4.48
Ssbp4-205ENSMUST00000210369 Sycp2Q9CUU3 1500 aa42.61■■■■■ 4.41
Ssbp4-205ENSMUST00000210369 Rb1cc1Q9ESK9 1588 aa42.61■■■■■ 4.41
Ssbp4-205ENSMUST00000210369 Ccdc180J3QNE4 1664 aa42.56■■■■■ 4.4
Ssbp4-205ENSMUST00000210369 Baz1aO88379 1555 aa42.18■■■■■ 4.34
Ssbp4-205ENSMUST00000210369 BicraF8VPZ9 1578 aa41.96■■■■■ 4.31
Ssbp4-205ENSMUST00000210369 Crybg2B7ZCC2 1516 aa41.81■■■■■ 4.28
Ssbp4-205ENSMUST00000210369 Zcchc6Q5BLK4 1491 aaKnown RBP41.42■■■■■ 4.22
Ssbp4-205ENSMUST00000210369 Smarca2Q6DIC0 1577 aa41.13■■■■■ 4.18
Ssbp4-205ENSMUST00000210369 Pds5bQ4VA53 1446 aaKnown RBP40.76■■■■■ 4.12
Ssbp4-205ENSMUST00000210369 Ccdc136Q3TVA9 1136 aa40.53■■■■■ 4.08
Ssbp4-205ENSMUST00000210369 Atad2bE9Q166 1460 aaKnown RBP40.42■■■■■ 4.06
Ssbp4-205ENSMUST00000210369 Dnajc5bQ9CQ94 199 aa40.35■■■■■ 4.05
Ssbp4-205ENSMUST00000210369 Cecr2E9Q2Z1 1453 aa40.31■■■■■ 4.04
Ssbp4-205ENSMUST00000210369 Thoc2B1AZI6 1594 aaKnown RBP40.27■■■■■ 4.04
Ssbp4-205ENSMUST00000210369 Smarca4Q3TKT4 1613 aaKnown RBP40.23■■■■■ 4.03
Ssbp4-205ENSMUST00000210369 Trim41Q5NCC3 630 aa40.21■■■■■ 4.03
Ssbp4-205ENSMUST00000210369 Brd4Q9ESU6 1400 aaKnown RBP40.11■■■■■ 4.01
Ssbp4-205ENSMUST00000210369 Iqgap2Q3UQ44 1575 aa39.96■■■■□ 3.99
Ssbp4-205ENSMUST00000210369 Ercc6F8VPZ5 1481 aa39.93■■■■□ 3.98
Ssbp4-205ENSMUST00000210369 HrcG5E8J6 738 aa39.88■■■■□ 3.98
Ssbp4-205ENSMUST00000210369 Synj1Q8CHC4 1574 aa39.71■■■■□ 3.95
Ssbp4-205ENSMUST00000210369 Cc2d2aQ8CFW7 1633 aa39.68■■■■□ 3.94
Ssbp4-205ENSMUST00000210369 CftrP26361 1476 aa39.62■■■■□ 3.93
Ssbp4-205ENSMUST00000210369 Cttnbp2B9EJA2 1648 aa39.61■■■■□ 3.93
Ssbp4-205ENSMUST00000210369 Wdr62Q3U3T8 1523 aa39.56■■■■□ 3.92
Ssbp4-205ENSMUST00000210369 Frmpd1A2AKB4 1549 aa39.51■■■■□ 3.92
Ssbp4-205ENSMUST00000210369 Fam135aQ6NS59 1506 aa39.42■■■■□ 3.9
Ssbp4-205ENSMUST00000210369 Golga3P55937 1487 aa39.3■■■■□ 3.88
Ssbp4-205ENSMUST00000210369 Phldb1Q6PDH0 1371 aaKnown RBP39.24■■■■□ 3.87
Ssbp4-205ENSMUST00000210369 Top2bQ64511 1612 aa39.05■■■■□ 3.84
Ssbp4-205ENSMUST00000210369 Cep164Q5DU05 1446 aa39.05■■■■□ 3.84
Ssbp4-205ENSMUST00000210369 Unc13aQ4KUS2 1712 aa39.03■■■■□ 3.84
Ssbp4-205ENSMUST00000210369 Baz1bQ9Z277 1479 aa38.97■■■■□ 3.83
Ssbp4-205ENSMUST00000210369 Cngb1E1AZ71 1325 aa38.96■■■■□ 3.83
Ssbp4-205ENSMUST00000210369 Esf1Q3V1V3 845 aaKnown RBP38.95■■■■□ 3.83
Ssbp4-205ENSMUST00000210369 Ubl4bQ9CQ84 188 aa38.9■■■■□ 3.82
Ssbp4-205ENSMUST00000210369 Rsf1E9PWW9 1441 aaKnown RBP38.73■■■■□ 3.79
Ssbp4-205ENSMUST00000210369 Ccdc88bQ4QRL3 1481 aa38.6■■■■□ 3.77
Ssbp4-205ENSMUST00000210369 Mrc2Q64449 1479 aa38.53■■■■□ 3.76
Ssbp4-205ENSMUST00000210369 Fmn1Q05860 1466 aa38.52■■■■□ 3.76
Ssbp4-205ENSMUST00000210369 Chic1Q8CBW7 227 aa38.45■■■■□ 3.75
Ssbp4-205ENSMUST00000210369 TnnQ80Z71 1560 aa38.23■■■■□ 3.71
Ssbp4-205ENSMUST00000210369 Kif15Q6P9L6 1387 aa38.23■■■■□ 3.71
Ssbp4-205ENSMUST00000210369 Top2aQ01320 1528 aaKnown RBP38.15■■■■□ 3.7
Ssbp4-205ENSMUST00000210369 Lamc3Q9R0B6 1581 aa38.14■■■■□ 3.7
Ssbp4-205ENSMUST00000210369 Cux2P70298 1426 aa38.12■■■■□ 3.69
Ssbp4-205ENSMUST00000210369 Gab3Q8BSM5 595 aa37.82■■■■□ 3.64
Ssbp4-205ENSMUST00000210369 Npm1Q61937 292 aaKnown RBP37.8■■■■□ 3.64
Ssbp4-205ENSMUST00000210369 Kif21aQ9QXL2 1672 aa37.78■■■■□ 3.64
Ssbp4-205ENSMUST00000210369 Rapgef2Q8CHG7 1496 aa37.74■■■■□ 3.63
Ssbp4-205ENSMUST00000210369 Lrriq1Q0P5X1 1673 aa37.69■■■■□ 3.62
Ssbp4-205ENSMUST00000210369 Camsap1A2AHC3 1581 aa37.62■■■■□ 3.61
Ssbp4-205ENSMUST00000210369 Ccdc18Q640L5 1455 aa37.6■■■■□ 3.61
Ssbp4-205ENSMUST00000210369 Il27Q8K3I6 234 aa37.54■■■■□ 3.6
Ssbp4-205ENSMUST00000210369 Rpgrip1Q9EPQ2 1331 aa37.42■■■■□ 3.58
Ssbp4-205ENSMUST00000210369 Cep162Q6ZQ06 1403 aa37.37■■■■□ 3.57
Ssbp4-205ENSMUST00000210369 NrkQ9R0G8 1455 aa37.36■■■■□ 3.57
Ssbp4-205ENSMUST00000210369 LrpprcQ6PB66 1392 aaKnown RBP37.34■■■■□ 3.57
Ssbp4-205ENSMUST00000210369 Dhx29Q6PGC1 1365 aaKnown RBP37.34■■■■□ 3.57
Ssbp4-205ENSMUST00000210369 Eif4g1Q6NZJ6 1600 aaKnown RBP37.32■■■■□ 3.56
Ssbp4-205ENSMUST00000210369 Grin2bQ01097 1482 aa37.25■■■■□ 3.55
Ssbp4-205ENSMUST00000210369 Shroom4Q1W617 1475 aa37.24■■■■□ 3.55
Ssbp4-205ENSMUST00000210369 Crocc2F6XLV1 1638 aa37.19■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 Urb2E9Q7L1 1524 aaKnown RBP37.18■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 Acin1Q9JIX8 1338 aaKnown RBP37.17■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 Npm2Q80W85 207 aa37.17■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 Ehmt2Q9Z148 1263 aaKnown RBP37.16■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 Plb1Q3TTY0 1478 aa37.15■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 Eif4g3Q80XI3 1579 aaKnown RBP37.15■■■■□ 3.54
Ssbp4-205ENSMUST00000210369 PogzQ8BZH4 1409 aaKnown RBP37.12■■■■□ 3.53
Ssbp4-205ENSMUST00000210369 PtprkP35822 1457 aa37.12■■■■□ 3.53
Ssbp4-205ENSMUST00000210369 Map3k1P53349 1493 aa37.03■■■■□ 3.52
Ssbp4-205ENSMUST00000210369 Arhgap35Q91YM2 1499 aa37.01■■■■□ 3.51
Ssbp4-205ENSMUST00000210369 Duox2A2AQ99 1517 aa36.97■■■■□ 3.51
Ssbp4-205ENSMUST00000210369 Efcab5A0JP43 1406 aa36.94■■■■□ 3.5
Ssbp4-205ENSMUST00000210369 Ift140E9PY46 1464 aa36.86■■■■□ 3.49
Ssbp4-205ENSMUST00000210369 Mroh2bQ7M6Y6 1581 aa36.8■■■■□ 3.48
Ssbp4-205ENSMUST00000210369 Myt1lP97500 1187 aa36.79■■■■□ 3.48
Ssbp4-205ENSMUST00000210369 AqrQ8CFQ3 1481 aaKnown RBP36.74■■■■□ 3.47
Ssbp4-205ENSMUST00000210369 Samd9lQ69Z37 1561 aa36.68■■■■□ 3.46
Ssbp4-205ENSMUST00000210369 Clip1Q922J3 1391 aa36.64■■■■□ 3.46
Ssbp4-205ENSMUST00000210369 Rusc2Q80U22 1514 aa36.64■■■■□ 3.46
Ssbp4-205ENSMUST00000210369 Disp1Q3TDN0 1521 aa36.62■■■■□ 3.45
Ssbp4-205ENSMUST00000210369 Eea1Q8BL66 1411 aa36.54■■■■□ 3.44
Ssbp4-205ENSMUST00000210369 Pbrm1Q8BSQ9 1634 aaKnown RBP36.53■■■■□ 3.44
Ssbp4-205ENSMUST00000210369 Zeb1Q64318 1117 aa36.52■■■■□ 3.44
Ssbp4-205ENSMUST00000210369 Setd1bQ8CFT2 1985 aa36.5■■■■□ 3.43
Ssbp4-205ENSMUST00000210369 SynmQ70IV5 1561 aa36.5■■■■□ 3.43
Ssbp4-205ENSMUST00000210369 Carmil1Q6EDY6 1374 aa36.48■■■■□ 3.43
Ssbp4-205ENSMUST00000210369 Shroom2A2ALU4 1481 aa36.47■■■■□ 3.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms