RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 Gm35339A0A140LHH9 1649 aa48,89■■■■■ 5,42
Ssbp4-205ENSMUST00000210369 NischQ80TM9 1593 aa48,7■■■■■ 5,39
Ssbp4-205ENSMUST00000210369 Abcc9P70170 1546 aa47,36■■■■■ 5,17
Ssbp4-205ENSMUST00000210369 Abcc8B2RUS7 1588 aa46,68■■■■■ 5,06
Ssbp4-205ENSMUST00000210369 ScribQ80U72 1612 aa44,83■■■■■ 4,77
Ssbp4-205ENSMUST00000210369 Rhox8Q6VSS7 320 aa43,7■■■■■ 4,59
Ssbp4-205ENSMUST00000210369 Dcaf1Q80TR8 1506 aa43,56■■■■■ 4,56
Ssbp4-205ENSMUST00000210369 NacadQ5SWP3 1504 aa43,49■■■■■ 4,55
Ssbp4-205ENSMUST00000210369 Kdm5dQ62240 1548 aa43,44■■■■■ 4,54
Ssbp4-205ENSMUST00000210369 Rtl1Q7M732 1744 aa43,05■■■■■ 4,48
Ssbp4-205ENSMUST00000210369 Sycp2Q9CUU3 1500 aa42,61■■■■■ 4,41
Ssbp4-205ENSMUST00000210369 Rb1cc1Q9ESK9 1588 aa42,61■■■■■ 4,41
Ssbp4-205ENSMUST00000210369 Ccdc180J3QNE4 1664 aa42,56■■■■■ 4,4
Ssbp4-205ENSMUST00000210369 Baz1aO88379 1555 aa42,18■■■■■ 4,34
Ssbp4-205ENSMUST00000210369 BicraF8VPZ9 1578 aa41,96■■■■■ 4,31
Ssbp4-205ENSMUST00000210369 Crybg2B7ZCC2 1516 aa41,81■■■■■ 4,28
Ssbp4-205ENSMUST00000210369 Zcchc6Q5BLK4 1491 aaKnown RBP41,42■■■■■ 4,22
Ssbp4-205ENSMUST00000210369 Smarca2Q6DIC0 1577 aa41,13■■■■■ 4,18
Ssbp4-205ENSMUST00000210369 Pds5bQ4VA53 1446 aaKnown RBP40,76■■■■■ 4,12
Ssbp4-205ENSMUST00000210369 Ccdc136Q3TVA9 1136 aa40,53■■■■■ 4,08
Ssbp4-205ENSMUST00000210369 Atad2bE9Q166 1460 aaKnown RBP40,42■■■■■ 4,06
Ssbp4-205ENSMUST00000210369 Dnajc5bQ9CQ94 199 aa40,35■■■■■ 4,05
Ssbp4-205ENSMUST00000210369 Cecr2E9Q2Z1 1453 aa40,31■■■■■ 4,04
Ssbp4-205ENSMUST00000210369 Thoc2B1AZI6 1594 aaKnown RBP40,27■■■■■ 4,04
Ssbp4-205ENSMUST00000210369 Smarca4Q3TKT4 1613 aaKnown RBP40,23■■■■■ 4,03
Ssbp4-205ENSMUST00000210369 Trim41Q5NCC3 630 aa40,21■■■■■ 4,03
Ssbp4-205ENSMUST00000210369 Brd4Q9ESU6 1400 aaKnown RBP40,11■■■■■ 4,01
Ssbp4-205ENSMUST00000210369 Iqgap2Q3UQ44 1575 aa39,96■■■■□ 3,99
Ssbp4-205ENSMUST00000210369 Ercc6F8VPZ5 1481 aa39,93■■■■□ 3,98
Ssbp4-205ENSMUST00000210369 HrcG5E8J6 738 aa39,88■■■■□ 3,98
Ssbp4-205ENSMUST00000210369 Synj1Q8CHC4 1574 aa39,71■■■■□ 3,95
Ssbp4-205ENSMUST00000210369 Cc2d2aQ8CFW7 1633 aa39,68■■■■□ 3,94
Ssbp4-205ENSMUST00000210369 CftrP26361 1476 aa39,62■■■■□ 3,93
Ssbp4-205ENSMUST00000210369 Cttnbp2B9EJA2 1648 aa39,61■■■■□ 3,93
Ssbp4-205ENSMUST00000210369 Wdr62Q3U3T8 1523 aa39,56■■■■□ 3,92
Ssbp4-205ENSMUST00000210369 Frmpd1A2AKB4 1549 aa39,51■■■■□ 3,92
Ssbp4-205ENSMUST00000210369 Fam135aQ6NS59 1506 aa39,42■■■■□ 3,9
Ssbp4-205ENSMUST00000210369 Golga3P55937 1487 aa39,3■■■■□ 3,88
Ssbp4-205ENSMUST00000210369 Phldb1Q6PDH0 1371 aaKnown RBP39,24■■■■□ 3,87
Ssbp4-205ENSMUST00000210369 Top2bQ64511 1612 aa39,05■■■■□ 3,84
Ssbp4-205ENSMUST00000210369 Cep164Q5DU05 1446 aa39,05■■■■□ 3,84
Ssbp4-205ENSMUST00000210369 Unc13aQ4KUS2 1712 aa39,03■■■■□ 3,84
Ssbp4-205ENSMUST00000210369 Baz1bQ9Z277 1479 aa38,97■■■■□ 3,83
Ssbp4-205ENSMUST00000210369 Cngb1E1AZ71 1325 aa38,96■■■■□ 3,83
Ssbp4-205ENSMUST00000210369 Esf1Q3V1V3 845 aaKnown RBP38,95■■■■□ 3,83
Ssbp4-205ENSMUST00000210369 Ubl4bQ9CQ84 188 aa38,9■■■■□ 3,82
Ssbp4-205ENSMUST00000210369 Rsf1E9PWW9 1441 aaKnown RBP38,73■■■■□ 3,79
Ssbp4-205ENSMUST00000210369 Ccdc88bQ4QRL3 1481 aa38,6■■■■□ 3,77
Ssbp4-205ENSMUST00000210369 Mrc2Q64449 1479 aa38,53■■■■□ 3,76
Ssbp4-205ENSMUST00000210369 Fmn1Q05860 1466 aa38,52■■■■□ 3,76
Ssbp4-205ENSMUST00000210369 Chic1Q8CBW7 227 aa38,45■■■■□ 3,75
Ssbp4-205ENSMUST00000210369 TnnQ80Z71 1560 aa38,23■■■■□ 3,71
Ssbp4-205ENSMUST00000210369 Kif15Q6P9L6 1387 aa38,23■■■■□ 3,71
Ssbp4-205ENSMUST00000210369 Top2aQ01320 1528 aaKnown RBP38,15■■■■□ 3,7
Ssbp4-205ENSMUST00000210369 Lamc3Q9R0B6 1581 aa38,14■■■■□ 3,7
Ssbp4-205ENSMUST00000210369 Cux2P70298 1426 aa38,12■■■■□ 3,69
Ssbp4-205ENSMUST00000210369 Gab3Q8BSM5 595 aa37,82■■■■□ 3,64
Ssbp4-205ENSMUST00000210369 Npm1Q61937 292 aaKnown RBP37,8■■■■□ 3,64
Ssbp4-205ENSMUST00000210369 Kif21aQ9QXL2 1672 aa37,78■■■■□ 3,64
Ssbp4-205ENSMUST00000210369 Rapgef2Q8CHG7 1496 aa37,74■■■■□ 3,63
Ssbp4-205ENSMUST00000210369 Lrriq1Q0P5X1 1673 aa37,69■■■■□ 3,62
Ssbp4-205ENSMUST00000210369 Camsap1A2AHC3 1581 aa37,62■■■■□ 3,61
Ssbp4-205ENSMUST00000210369 Ccdc18Q640L5 1455 aa37,6■■■■□ 3,61
Ssbp4-205ENSMUST00000210369 Il27Q8K3I6 234 aa37,54■■■■□ 3,6
Ssbp4-205ENSMUST00000210369 Rpgrip1Q9EPQ2 1331 aa37,42■■■■□ 3,58
Ssbp4-205ENSMUST00000210369 Cep162Q6ZQ06 1403 aa37,37■■■■□ 3,57
Ssbp4-205ENSMUST00000210369 NrkQ9R0G8 1455 aa37,36■■■■□ 3,57
Ssbp4-205ENSMUST00000210369 LrpprcQ6PB66 1392 aaKnown RBP37,34■■■■□ 3,57
Ssbp4-205ENSMUST00000210369 Dhx29Q6PGC1 1365 aaKnown RBP37,34■■■■□ 3,57
Ssbp4-205ENSMUST00000210369 Eif4g1Q6NZJ6 1600 aaKnown RBP37,32■■■■□ 3,56
Ssbp4-205ENSMUST00000210369 Grin2bQ01097 1482 aa37,25■■■■□ 3,55
Ssbp4-205ENSMUST00000210369 Shroom4Q1W617 1475 aa37,24■■■■□ 3,55
Ssbp4-205ENSMUST00000210369 Crocc2F6XLV1 1638 aa37,19■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 Urb2E9Q7L1 1524 aaKnown RBP37,18■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 Acin1Q9JIX8 1338 aaKnown RBP37,17■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 Npm2Q80W85 207 aa37,17■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 Ehmt2Q9Z148 1263 aaKnown RBP37,16■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 Plb1Q3TTY0 1478 aa37,15■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 Eif4g3Q80XI3 1579 aaKnown RBP37,15■■■■□ 3,54
Ssbp4-205ENSMUST00000210369 PogzQ8BZH4 1409 aaKnown RBP37,12■■■■□ 3,53
Ssbp4-205ENSMUST00000210369 PtprkP35822 1457 aa37,12■■■■□ 3,53
Ssbp4-205ENSMUST00000210369 Map3k1P53349 1493 aa37,03■■■■□ 3,52
Ssbp4-205ENSMUST00000210369 Arhgap35Q91YM2 1499 aa37,01■■■■□ 3,51
Ssbp4-205ENSMUST00000210369 Duox2A2AQ99 1517 aa36,97■■■■□ 3,51
Ssbp4-205ENSMUST00000210369 Efcab5A0JP43 1406 aa36,94■■■■□ 3,5
Ssbp4-205ENSMUST00000210369 Ift140E9PY46 1464 aa36,86■■■■□ 3,49
Ssbp4-205ENSMUST00000210369 Mroh2bQ7M6Y6 1581 aa36,8■■■■□ 3,48
Ssbp4-205ENSMUST00000210369 Myt1lP97500 1187 aa36,79■■■■□ 3,48
Ssbp4-205ENSMUST00000210369 AqrQ8CFQ3 1481 aaKnown RBP36,74■■■■□ 3,47
Ssbp4-205ENSMUST00000210369 Samd9lQ69Z37 1561 aa36,68■■■■□ 3,46
Ssbp4-205ENSMUST00000210369 Clip1Q922J3 1391 aa36,64■■■■□ 3,46
Ssbp4-205ENSMUST00000210369 Rusc2Q80U22 1514 aa36,64■■■■□ 3,46
Ssbp4-205ENSMUST00000210369 Disp1Q3TDN0 1521 aa36,62■■■■□ 3,45
Ssbp4-205ENSMUST00000210369 Eea1Q8BL66 1411 aa36,54■■■■□ 3,44
Ssbp4-205ENSMUST00000210369 Pbrm1Q8BSQ9 1634 aaKnown RBP36,53■■■■□ 3,44
Ssbp4-205ENSMUST00000210369 Zeb1Q64318 1117 aa36,52■■■■□ 3,44
Ssbp4-205ENSMUST00000210369 Setd1bQ8CFT2 1985 aa36,5■■■■□ 3,43
Ssbp4-205ENSMUST00000210369 SynmQ70IV5 1561 aa36,5■■■■□ 3,43
Ssbp4-205ENSMUST00000210369 Carmil1Q6EDY6 1374 aa36,48■■■■□ 3,43
Ssbp4-205ENSMUST00000210369 Shroom2A2ALU4 1481 aa36,47■■■■□ 3,43
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms