RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 A830031A19RikQ8BNT5 113 aa7.7□□□□□ -1.18
Ift88-201ENSMUST00000122063 Lgals4Q8K419 326 aa7.7□□□□□ -1.18
Ift88-201ENSMUST00000122063 Tm2d2Q8R0I4 213 aa7.7□□□□□ -1.18
Ift88-201ENSMUST00000122063 Igkv4-72A0A0B4J1I4 117 aa7.69□□□□□ -1.18
Ift88-201ENSMUST00000122063 Lst1O08843 95 aa7.69□□□□□ -1.18
Ift88-201ENSMUST00000122063 Nhlrc1Q8BR37 401 aa7.69□□□□□ -1.18
Ift88-201ENSMUST00000122063 Nsd1O88491 2588 aaKnown RBP7.69□□□□□ -1.18
Ift88-201ENSMUST00000122063 D730001G18RikA0A087WQU7 115 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 CrygdP04342 174 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 CrygeQ03740 174 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 Cox6cQ9CPQ1 76 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 9430069I07RikQ9CX21 111 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 LbhQ9CX60 105 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 Igkv4-53A0A0G2JFC6 119 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 P01755 137 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 Prss58Q8BW11 241 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 Higd2aQ9CQJ1 106 aa7.68□□□□□ -1.18
Ift88-201ENSMUST00000122063 Gm10767Q3TQP0 103 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 Col6a5A6H584 2640 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 Gm10647E9Q8X0 124 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 Dad1P61804 113 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 CdsnQ7TPC1 561 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 CenpwQ3URR0 86 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 MobpQ9D2P8 170 aa7.67□□□□□ -1.18
Ift88-201ENSMUST00000122063 Spink4O35679 86 aa7.66□□□□□ -1.18
Ift88-201ENSMUST00000122063 PtprqP0C5E4 2300 aa7.66□□□□□ -1.18
Ift88-201ENSMUST00000122063 Ighv1-61P01749 117 aa7.66□□□□□ -1.18
Ift88-201ENSMUST00000122063 SelenowP63300 88 aa7.66□□□□□ -1.18
Ift88-201ENSMUST00000122063 Srrm2Q8BTI8 2703 aaKnown RBP7.66□□□□□ -1.18
Ift88-201ENSMUST00000122063 ApcQ61315 2845 aa7.66□□□□□ -1.18
Ift88-201ENSMUST00000122063 Ighv1-59A0A0A6YXE0 117 aa7.65□□□□□ -1.18
Ift88-201ENSMUST00000122063 Cdip1Q9DB75 208 aa7.65□□□□□ -1.18
Ift88-201ENSMUST00000122063 MalO09198 153 aa7.65□□□□□ -1.18
Ift88-201ENSMUST00000122063 Ube2wQ8VDW4 151 aa7.65□□□□□ -1.18
Ift88-201ENSMUST00000122063 Lyrm7Q9DA03 104 aa7.65□□□□□ -1.18
Ift88-201ENSMUST00000122063 Cops9Q3U898 57 aa7.65□□□□□ -1.19
Ift88-201ENSMUST00000122063 Ndufa12Q7TMF3 145 aaKnown RBP7.65□□□□□ -1.19
Ift88-201ENSMUST00000122063 Defb29Q8BGW9 78 aa7.64□□□□□ -1.19
Ift88-201ENSMUST00000122063 Zfand2aQ9JII7 171 aa7.64□□□□□ -1.19
Ift88-201ENSMUST00000122063 Trav13-1A0A075B644 110 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 Igkv4-61A0A0G2JH00 117 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 Trbv13-2A0A140T8N6 113 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 1700020N15RikL7MTX3 112 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 Xlr5cQ9JJR2 179 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 Igkv6-13A0A0G2JGY3 119 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 PemtQ61907 199 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 Ss18l2Q9D174 77 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 9530053A07RikE9PVG8 2581 aa7.63□□□□□ -1.19
Ift88-201ENSMUST00000122063 Zfp951A0A087WRH0 451 aa7.62□□□□□ -1.19
Ift88-201ENSMUST00000122063 Cox8cA6H666 72 aa7.62□□□□□ -1.19
Ift88-201ENSMUST00000122063 Odf3l2Q3TZ65 277 aa7.62□□□□□ -1.19
Ift88-201ENSMUST00000122063 Cryba4Q9JJV0 196 aa7.61□□□□□ -1.19
Ift88-201ENSMUST00000122063 Igkv1-35A0A0G2JDE5 120 aa7.61□□□□□ -1.19
Ift88-201ENSMUST00000122063 Gm43218A0A0G2JGT0 114 aa7.61□□□□□ -1.19
Ift88-201ENSMUST00000122063 Defb50Q6TU36 73 aa7.61□□□□□ -1.19
Ift88-201ENSMUST00000122063 Lage3Q9CR70 148 aa7.61□□□□□ -1.19
Ift88-201ENSMUST00000122063 Igkv3-9A0A140T8P4 119 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Cks1bP61025 79 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Pglyrp4Q0VB07 374 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Gm10577Q3UDV9 132 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 2010109I03RikQ9CQ11 111 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Gm7138L7N2C3 230 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Gm3238W4VSP7 230 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Trav9n-4A0A075B631 113 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Defa20Q45VN2 95 aa7.6□□□□□ -1.19
Ift88-201ENSMUST00000122063 Igkv1-117A0A140T8M0 119 aa7.59□□□□□ -1.19
Ift88-201ENSMUST00000122063 Spata45Q9CVW4 97 aa7.59□□□□□ -1.19
Ift88-201ENSMUST00000122063 Trav13-2A0A075B649 110 aa7.59□□□□□ -1.19
Ift88-201ENSMUST00000122063 Anapc13Q8R034 74 aa7.59□□□□□ -1.19
Ift88-201ENSMUST00000122063 Spry2Q9QXV8 315 aa7.59□□□□□ -1.19
Ift88-201ENSMUST00000122063 Trav13n-2A0A0G2JF93 110 aa7.58□□□□□ -1.2
Ift88-201ENSMUST00000122063 Cmc4Q61908 68 aa7.58□□□□□ -1.2
Ift88-201ENSMUST00000122063 Fn1P11276 2477 aaKnown RBP7.57□□□□□ -1.2
Ift88-201ENSMUST00000122063 Tmem223Q9CQE2 199 aaKnown RBP7.57□□□□□ -1.2
Ift88-201ENSMUST00000122063 Klk11Q9QYN3 276 aa7.57□□□□□ -1.2
Ift88-201ENSMUST00000122063 Tmem86bQ497J1 226 aa7.57□□□□□ -1.2
Ift88-201ENSMUST00000122063 Wdr38Q9D994 303 aa7.56□□□□□ -1.2
Ift88-201ENSMUST00000122063 Dnal4Q9DCM4 105 aa7.56□□□□□ -1.2
Ift88-201ENSMUST00000122063 Gm10251J3QPM5 127 aa7.56□□□□□ -1.2
Ift88-201ENSMUST00000122063 TeppQ6IMH0 216 aa7.56□□□□□ -1.2
Ift88-201ENSMUST00000122063 Igkv3-1A0A075B5P1 119 aa7.55□□□□□ -1.2
Ift88-201ENSMUST00000122063 Igkv8-24A0A140T8P5 121 aa7.55□□□□□ -1.2
Ift88-201ENSMUST00000122063 Foxc1Q61572 553 aa7.55□□□□□ -1.2
Ift88-201ENSMUST00000122063 VwfQ8CIZ8 2813 aa7.55□□□□□ -1.2
Ift88-201ENSMUST00000122063 MifP34884 115 aaKnown RBP7.55□□□□□ -1.2
Ift88-201ENSMUST00000122063 Wfdc12Q9JHY3 85 aa7.55□□□□□ -1.2
Ift88-201ENSMUST00000122063 Igkv8-16A0A0G2JDG9 121 aa7.54□□□□□ -1.2
Ift88-201ENSMUST00000122063 Gm10549Q3URY4 149 aa7.53□□□□□ -1.2
Ift88-201ENSMUST00000122063 Ighv13-2A0A0A6YWN3 119 aa7.53□□□□□ -1.2
Ift88-201ENSMUST00000122063 P01896 185 aa7.53□□□□□ -1.2
Ift88-201ENSMUST00000122063 Gm16381A0A1Y7VKT9 73 aa7.52□□□□□ -1.21
Ift88-201ENSMUST00000122063 Mzt1Q8BUR9 78 aa7.52□□□□□ -1.21
Ift88-201ENSMUST00000122063 Krtap11-1E9Q2E9 183 aa7.51□□□□□ -1.21
Ift88-201ENSMUST00000122063 Gm10518F6UQQ9 182 aa7.51□□□□□ -1.21
Ift88-201ENSMUST00000122063 Rpl28P41105 137 aaKnown RBP7.51□□□□□ -1.21
Ift88-201ENSMUST00000122063 Igkv8-34A0A0G2JDU0 121 aa7.51□□□□□ -1.21
Ift88-201ENSMUST00000122063 Gm7137J3QMW1 236 aa7.51□□□□□ -1.21
Ift88-201ENSMUST00000122063 4930524J08RikQ9CUJ5 163 aa7.51□□□□□ -1.21
Ift88-201ENSMUST00000122063 Gm7102J3QQ10 178 aa7.5□□□□□ -1.21
Ift88-201ENSMUST00000122063 5730596B20RikQ8BQ08 205 aa7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms