RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Igkv4-74A0A0B4J1I3 119 aa10.32□□□□□ -0.76
Syn1-202ENSMUST00000115345 Ndufa12Q7TMF3 145 aaKnown RBP10.32□□□□□ -0.76
Syn1-202ENSMUST00000115345 Gphb5Q812B2 130 aa10.32□□□□□ -0.76
Syn1-202ENSMUST00000115345 Ighv1-56A0A0A6YXG2 117 aa10.31□□□□□ -0.76
Syn1-202ENSMUST00000115345 Gm10577Q3UDV9 132 aa10.31□□□□□ -0.76
Syn1-202ENSMUST00000115345 Q8BT88 171 aa10.31□□□□□ -0.76
Syn1-202ENSMUST00000115345 Sorl1O88307 2215 aaKnown RBP10.31□□□□□ -0.76
Syn1-202ENSMUST00000115345 Trav13n-1A0A0G2JEU8 110 aa10.3□□□□□ -0.76
Syn1-202ENSMUST00000115345 Trav13n-2A0A0G2JF93 110 aa10.3□□□□□ -0.76
Syn1-202ENSMUST00000115345 Ube2aQ9Z255 152 aa10.3□□□□□ -0.76
Syn1-202ENSMUST00000115345 Inafm2A0A1L1STD6 152 aa10.29□□□□□ -0.76
Syn1-202ENSMUST00000115345 Ighv2-5A0A0A6YY69 116 aa10.29□□□□□ -0.76
Syn1-202ENSMUST00000115345 Gm17521F6QAC8 156 aa10.29□□□□□ -0.76
Syn1-202ENSMUST00000115345 Pgpep1lQ9CWB5 130 aa10.29□□□□□ -0.76
Syn1-202ENSMUST00000115345 Pcnx1Q9QYC1 2344 aa10.28□□□□□ -0.76
Syn1-202ENSMUST00000115345 Nav2E9Q842 2432 aa10.28□□□□□ -0.76
Syn1-202ENSMUST00000115345 Ifitm1Q9D103 106 aa10.28□□□□□ -0.76
Syn1-202ENSMUST00000115345 Gm16181B0V2H2 73 aa10.27□□□□□ -0.76
Syn1-202ENSMUST00000115345 Dynlrb2Q9DAJ5 96 aa10.27□□□□□ -0.77
Syn1-202ENSMUST00000115345 9530053A07RikE9PVG8 2581 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Igkv1-117A0A140T8M0 119 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Igkv3-12A0A140T8P0 119 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 1700011M02RikB1AX35 88 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Gm17689B3GLJ4 109 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Gm3646F6S692 53 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ighv1-59A0A0A6YXE0 117 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Fgfbp3Q1HCM0 245 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Csmd2V9GX34 3611 aa10.26□□□□□ -0.77
Syn1-202ENSMUST00000115345 Q4KKZ1 196 aa10.25□□□□□ -0.77
Syn1-202ENSMUST00000115345 OdaphJ3QNT8 126 aa10.25□□□□□ -0.77
Syn1-202ENSMUST00000115345 P01823 113 aa10.25□□□□□ -0.77
Syn1-202ENSMUST00000115345 Defb2P82020 71 aa10.25□□□□□ -0.77
Syn1-202ENSMUST00000115345 Defb18Q30KP5 85 aa10.25□□□□□ -0.77
Syn1-202ENSMUST00000115345 P01745 121 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ighv10-3A0A075B5T6 119 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ighv3-4A0A0A6YXF1 117 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ccl21aP84444 133 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ccl21bP86792 133 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ccl21cP86793 133 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 Gm10845Q3UNY9 185 aa10.24□□□□□ -0.77
Syn1-202ENSMUST00000115345 OtoglF7A4A7 2325 aa10.23□□□□□ -0.77
Syn1-202ENSMUST00000115345 Tenm4Q3UHK6 2771 aa10.23□□□□□ -0.77
Syn1-202ENSMUST00000115345 Csmd1Q923L3 3564 aa10.23□□□□□ -0.77
Syn1-202ENSMUST00000115345 Ighv10-1A0A0B4J1J6 119 aa10.23□□□□□ -0.77
Syn1-202ENSMUST00000115345 Gm17732E9Q5I2 61 aa10.23□□□□□ -0.77
Syn1-202ENSMUST00000115345 Gm9903Q8C9Y8 129 aa10.23□□□□□ -0.77
Syn1-202ENSMUST00000115345 Trav13-1A0A075B644 110 aa10.22□□□□□ -0.77
Syn1-202ENSMUST00000115345 Wisp2Q9Z0G4 251 aa10.22□□□□□ -0.77
Syn1-202ENSMUST00000115345 Gm9821Q8K076 103 aa10.22□□□□□ -0.77
Syn1-202ENSMUST00000115345 Odf3l2Q3TZ65 277 aa10.21□□□□□ -0.77
Syn1-202ENSMUST00000115345 Usp9xP70398 2559 aaKnown RBP10.21□□□□□ -0.78
Syn1-202ENSMUST00000115345 CstadQ9D245 104 aa10.21□□□□□ -0.78
Syn1-202ENSMUST00000115345 Sptbn1Q62261 2363 aaKnown RBP10.2□□□□□ -0.78
Syn1-202ENSMUST00000115345 Gm10770F7D043 238 aa10.2□□□□□ -0.78
Syn1-202ENSMUST00000115345 Prr3Q811B5 190 aaKnown RBP10.2□□□□□ -0.78
Syn1-202ENSMUST00000115345 4930470P17RikQ9D542 155 aa10.2□□□□□ -0.78
Syn1-202ENSMUST00000115345 Qrich2A0A140LIY9 2337 aa10.2□□□□□ -0.78
Syn1-202ENSMUST00000115345 Igkv3-7A0A0G2JE31 119 aa10.2□□□□□ -0.78
Syn1-202ENSMUST00000115345 Akap6E9Q9K8 2307 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 MsmbO08540 113 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 LrbaQ9ESE1 2856 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 Gm10647E9Q8X0 124 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 Wfdc6bF6ULY1 148 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 Edn3P48299 214 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 Coa6Q8BGD8 79 aa10.19□□□□□ -0.78
Syn1-202ENSMUST00000115345 Gm10036E9PYL9 178 aaKnown RBP10.18□□□□□ -0.78
Syn1-202ENSMUST00000115345 P01786 117 aa10.18□□□□□ -0.78
Syn1-202ENSMUST00000115345 Gm17509Q9CZ61 145 aa10.18□□□□□ -0.78
Syn1-202ENSMUST00000115345 Igkv2-109A0A075B5K6 120 aa10.18□□□□□ -0.78
Syn1-202ENSMUST00000115345 Rpl39lQ9CQD0 51 aa10.18□□□□□ -0.78
Syn1-202ENSMUST00000115345 Ighv3-3A0A0A6YWL2 116 aa10.18□□□□□ -0.78
Syn1-202ENSMUST00000115345 Igkv8-27A0A0G2JF28 120 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 Igkv8-30A0A140T8M3 121 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 Higd2aQ9CQJ1 106 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 Trav9n-4A0A075B631 113 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 Trav9d-4A0A0G2JG37 103 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 Ttc28Q80XJ3 2450 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 P01755 137 aa10.17□□□□□ -0.78
Syn1-202ENSMUST00000115345 Gm11565A2A4M7 156 aa10.16□□□□□ -0.78
Syn1-202ENSMUST00000115345 Defb12Q8K4N3 78 aa10.16□□□□□ -0.78
Syn1-202ENSMUST00000115345 Prrc2cQ3TLH4 2846 aaKnown RBP10.15□□□□□ -0.78
Syn1-202ENSMUST00000115345 B230359F08RikA0A0B4J1K3 109 aa10.15□□□□□ -0.78
Syn1-202ENSMUST00000115345 Phxr4P15974 95 aa10.15□□□□□ -0.78
Syn1-202ENSMUST00000115345 Gm5617Q91VN2 117 aa10.15□□□□□ -0.78
Syn1-202ENSMUST00000115345 Igkv4-59A0A0B4J1I8 117 aa10.15□□□□□ -0.79
Syn1-202ENSMUST00000115345 9230109A22RikQ8BHE6 111 aa10.14□□□□□ -0.79
Syn1-202ENSMUST00000115345 2310034C09RikQ9D746 214 aa10.14□□□□□ -0.79
Syn1-202ENSMUST00000115345 Igkv4-91A0A075B5L2 119 aa10.13□□□□□ -0.79
Syn1-202ENSMUST00000115345 NacaP70670 2187 aaKnown RBP10.13□□□□□ -0.79
Syn1-202ENSMUST00000115345 Gm10322F7D7I4 111 aa10.13□□□□□ -0.79
Syn1-202ENSMUST00000115345 Coa5Q99M07 74 aa10.13□□□□□ -0.79
Syn1-202ENSMUST00000115345 Dopey1Q8BL99 2399 aa10.13□□□□□ -0.79
Syn1-202ENSMUST00000115345 6430550D23RikE9Q1X6 194 aa10.12□□□□□ -0.79
Syn1-202ENSMUST00000115345 Defb26Q30KN7 186 aa10.12□□□□□ -0.79
Syn1-202ENSMUST00000115345 Bahcc1Q3UHR0 2643 aa10.12□□□□□ -0.79
Syn1-202ENSMUST00000115345 Adgrg4B7ZCC9 3073 aa10.12□□□□□ -0.79
Syn1-202ENSMUST00000115345 Gm20499D3Z4G5 72 aa10.11□□□□□ -0.79
Syn1-202ENSMUST00000115345 Higd1cQ76I25 96 aa10.11□□□□□ -0.79
Syn1-202ENSMUST00000115345 Ighv2-9-1A0A075B697 116 aa10.11□□□□□ -0.79
Syn1-202ENSMUST00000115345 Prop1P97458 223 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms