RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Gm35339A0A140LHH9 1649 aa26.52■■□□□ 1.84
Syn1-202ENSMUST00000115345 NischQ80TM9 1593 aa25.87■■□□□ 1.73
Syn1-202ENSMUST00000115345 Rpgrip1Q9EPQ2 1331 aa25.27■■□□□ 1.64
Syn1-202ENSMUST00000115345 Abcc8B2RUS7 1588 aa25.16■■□□□ 1.62
Syn1-202ENSMUST00000115345 Abcc9P70170 1546 aa25.07■■□□□ 1.6
Syn1-202ENSMUST00000115345 Pcgf6Q99NA9 353 aa24.81■■□□□ 1.56
Syn1-202ENSMUST00000115345 DiexfQ8BTT6 772 aaKnown RBP24.59■■□□□ 1.53
Syn1-202ENSMUST00000115345 ScribQ80U72 1612 aa24.52■■□□□ 1.52
Syn1-202ENSMUST00000115345 Myt1Q8CFC2 1127 aa24.34■■□□□ 1.49
Syn1-202ENSMUST00000115345 CenpbP27790 599 aa24.13■■□□□ 1.45
Syn1-202ENSMUST00000115345 Las1lA2BE28 776 aaKnown RBP23.99■■□□□ 1.43
Syn1-202ENSMUST00000115345 Bcl11aQ9QYE3 773 aa23.87■■□□□ 1.41
Syn1-202ENSMUST00000115345 Acin1Q9JIX8 1338 aaKnown RBP23.79■■□□□ 1.4
Syn1-202ENSMUST00000115345 NacadQ5SWP3 1504 aa23.64■■□□□ 1.37
Syn1-202ENSMUST00000115345 Amer1Q7TS75 1132 aa23.61■■□□□ 1.37
Syn1-202ENSMUST00000115345 Neurod1Q60867 357 aa23.6■■□□□ 1.37
Syn1-202ENSMUST00000115345 Kdm5dQ62240 1548 aa23.59■■□□□ 1.37
Syn1-202ENSMUST00000115345 1700123L14RikQ3V2K7 440 aa23.51■■□□□ 1.35
Syn1-202ENSMUST00000115345 PrkcshO08795 521 aa23.35■■□□□ 1.33
Syn1-202ENSMUST00000115345 Rhox8Q6VSS7 320 aa23.34■■□□□ 1.33
Syn1-202ENSMUST00000115345 Sycp2Q9CUU3 1500 aa23.2■■□□□ 1.31
Syn1-202ENSMUST00000115345 Dcaf1Q80TR8 1506 aa23.13■■□□□ 1.29
Syn1-202ENSMUST00000115345 Supt5hO55201 1082 aaKnown RBP23.04■■□□□ 1.28
Syn1-202ENSMUST00000115345 BicraF8VPZ9 1578 aa22.96■■□□□ 1.27
Syn1-202ENSMUST00000115345 Trim41Q5NCC3 630 aa22.92■■□□□ 1.26
Syn1-202ENSMUST00000115345 Csrnp3P59055 597 aa22.88■■□□□ 1.25
Syn1-202ENSMUST00000115345 Aplp2Q06335 707 aa22.74■■□□□ 1.23
Syn1-202ENSMUST00000115345 Dnajc5bQ9CQ94 199 aa22.71■■□□□ 1.23
Syn1-202ENSMUST00000115345 Anks4bQ8K3X6 423 aa22.65■■□□□ 1.22
Syn1-202ENSMUST00000115345 Rb1cc1Q9ESK9 1588 aa22.54■■□□□ 1.2
Syn1-202ENSMUST00000115345 Ifnlr1Q8CGK5 535 aa22.5■■□□□ 1.19
Syn1-202ENSMUST00000115345 Ehmt2Q9Z148 1263 aaKnown RBP22.46■■□□□ 1.19
Syn1-202ENSMUST00000115345 Thoc2B1AZI6 1594 aaKnown RBP22.39■■□□□ 1.18
Syn1-202ENSMUST00000115345 Pds5bQ4VA53 1446 aaKnown RBP22.34■■□□□ 1.17
Syn1-202ENSMUST00000115345 Cngb1E1AZ71 1325 aa22.32■■□□□ 1.16
Syn1-202ENSMUST00000115345 Pknox2Q8BG99 474 aa22.24■■□□□ 1.15
Syn1-202ENSMUST00000115345 Ccdc180J3QNE4 1664 aa22.23■■□□□ 1.15
Syn1-202ENSMUST00000115345 Baz1aO88379 1555 aa22.21■■□□□ 1.15
Syn1-202ENSMUST00000115345 Plppr3Q7TPB0 716 aa22.19■■□□□ 1.14
Syn1-202ENSMUST00000115345 CatipB9EKE5 520 aa22.18■■□□□ 1.14
Syn1-202ENSMUST00000115345 Crybg2B7ZCC2 1516 aa22.18■■□□□ 1.14
Syn1-202ENSMUST00000115345 Fgd1P52734 960 aa22.07■■□□□ 1.12
Syn1-202ENSMUST00000115345 Atad2bE9Q166 1460 aaKnown RBP22.07■■□□□ 1.12
Syn1-202ENSMUST00000115345 Gm38655A0A286YDK6 273 aa22.05■■□□□ 1.12
Syn1-202ENSMUST00000115345 Fam71e1A1L3C1 212 aa22■■□□□ 1.11
Syn1-202ENSMUST00000115345 NrdcQ8BHG1 1161 aa21.98■■□□□ 1.11
Syn1-202ENSMUST00000115345 Hdac5Q9Z2V6 1113 aa21.96■■□□□ 1.11
Syn1-202ENSMUST00000115345 Cc2d2aQ8CFW7 1633 aa21.94■■□□□ 1.1
Syn1-202ENSMUST00000115345 Rtl1Q7M732 1744 aa21.92■■□□□ 1.1
Syn1-202ENSMUST00000115345 Ercc6F8VPZ5 1481 aa21.86■■□□□ 1.09
Syn1-202ENSMUST00000115345 Zcchc6Q5BLK4 1491 aaKnown RBP21.84■■□□□ 1.09
Syn1-202ENSMUST00000115345 Ttbk1Q6PCN3 1308 aa21.83■■□□□ 1.08
Syn1-202ENSMUST00000115345 Fam135aQ6NS59 1506 aa21.8■■□□□ 1.08
Syn1-202ENSMUST00000115345 Smarca2Q6DIC0 1577 aa21.79■■□□□ 1.08
Syn1-202ENSMUST00000115345 Smarca4Q3TKT4 1613 aaKnown RBP21.77■■□□□ 1.08
Syn1-202ENSMUST00000115345 Sall2Q9QX96 1004 aa21.72■■□□□ 1.07
Syn1-202ENSMUST00000115345 Iqgap2Q3UQ44 1575 aa21.7■■□□□ 1.06
Syn1-202ENSMUST00000115345 Zeb1Q64318 1117 aa21.68■■□□□ 1.06
Syn1-202ENSMUST00000115345 Gtf3c5Q8R2T8 520 aa21.65■■□□□ 1.06
Syn1-202ENSMUST00000115345 Wdr62Q3U3T8 1523 aa21.59■■□□□ 1.05
Syn1-202ENSMUST00000115345 Cdk11bP24788 784 aaKnown RBP21.57■■□□□ 1.04
Syn1-202ENSMUST00000115345 Baz1bQ9Z277 1479 aa21.56■■□□□ 1.04
Syn1-202ENSMUST00000115345 Cecr2E9Q2Z1 1453 aa21.55■■□□□ 1.04
Syn1-202ENSMUST00000115345 Frmpd1A2AKB4 1549 aa21.52■■□□□ 1.04
Syn1-202ENSMUST00000115345 BccipQ9CWI3 316 aa21.49■■□□□ 1.03
Syn1-202ENSMUST00000115345 Rtl5Q5DTT4 599 aa21.48■■□□□ 1.03
Syn1-202ENSMUST00000115345 Phldb1Q6PDH0 1371 aaKnown RBP21.44■■□□□ 1.02
Syn1-202ENSMUST00000115345 Gtf3c3Q3TMP1 882 aa21.39■■□□□ 1.02
Syn1-202ENSMUST00000115345 Plcd4Q8K3R3 807 aa21.39■■□□□ 1.02
Syn1-202ENSMUST00000115345 Mapk8ip2Q9ERE9 830 aa21.39■■□□□ 1.01
Syn1-202ENSMUST00000115345 Nop58Q6DFW4 536 aaKnown RBP21.37■■□□□ 1.01
Syn1-202ENSMUST00000115345 Unc13aQ4KUS2 1712 aa21.29■■□□□ 1
Syn1-202ENSMUST00000115345 Mrc2Q64449 1479 aa21.21■□□□□ 0.99
Syn1-202ENSMUST00000115345 Zfp777B9EKF4 885 aa21.2■□□□□ 0.98
Syn1-202ENSMUST00000115345 Pelp1Q9DBD5 1123 aaKnown RBP21.19■□□□□ 0.98
Syn1-202ENSMUST00000115345 Ubl4bQ9CQ84 188 aa21.15■□□□□ 0.98
Syn1-202ENSMUST00000115345 SafbD3YXK2 937 aaKnown RBP21.14■□□□□ 0.97
Syn1-202ENSMUST00000115345 TimelessQ9R1X4 1197 aa21.14■□□□□ 0.97
Syn1-202ENSMUST00000115345 Il27Q8K3I6 234 aa21.13■□□□□ 0.97
Syn1-202ENSMUST00000115345 Scaf1Q5U4C3 1256 aaKnown RBP21.1■□□□□ 0.97
Syn1-202ENSMUST00000115345 Aebp2Q9Z248 504 aaKnown RBP21.1■□□□□ 0.97
Syn1-202ENSMUST00000115345 NefmP08553 848 aa21.09■□□□□ 0.97
Syn1-202ENSMUST00000115345 Znf316Q6PGE4 1016 aa21.09■□□□□ 0.97
Syn1-202ENSMUST00000115345 Irx3P81067 507 aa21.06■□□□□ 0.96
Syn1-202ENSMUST00000115345 Eif5bQ05D44 1216 aaKnown RBP21.06■□□□□ 0.96
Syn1-202ENSMUST00000115345 Cttnbp2B9EJA2 1648 aa21.05■□□□□ 0.96
Syn1-202ENSMUST00000115345 Ipo4Q8VI75 1082 aa21.05■□□□□ 0.96
Syn1-202ENSMUST00000115345 Anp32aO35381 247 aa21.04■□□□□ 0.96
Syn1-202ENSMUST00000115345 HrcG5E8J6 738 aa21.04■□□□□ 0.96
Syn1-202ENSMUST00000115345 Upf2A2AT37 1269 aaKnown RBP21.02■□□□□ 0.96
Syn1-202ENSMUST00000115345 CftrP26361 1476 aa21.01■□□□□ 0.95
Syn1-202ENSMUST00000115345 Synj1Q8CHC4 1574 aa20.95■□□□□ 0.94
Syn1-202ENSMUST00000115345 Dnajc5P60904 198 aa20.93■□□□□ 0.94
Syn1-202ENSMUST00000115345 Ccdc9Q8VC31 543 aaKnown RBP20.92■□□□□ 0.94
Syn1-202ENSMUST00000115345 Hnrnpul2Q00PI9 745 aaKnown RBP20.88■□□□□ 0.93
Syn1-202ENSMUST00000115345 Tnnt3Q9QZ47 272 aa20.88■□□□□ 0.93
Syn1-202ENSMUST00000115345 Wdr66E9Q743 1299 aa20.87■□□□□ 0.93
Syn1-202ENSMUST00000115345 AampJ3QN89 436 aa20.83■□□□□ 0.93
Syn1-202ENSMUST00000115345 Brd4Q9ESU6 1400 aaKnown RBP20.82■□□□□ 0.92
Syn1-202ENSMUST00000115345 Lrriq1Q0P5X1 1673 aa20.81■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms