RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mzt1Q8BUR9 78 aa9.03□□□□□ -0.96
Nup88-203ENSMUST00000108531 Tomm7Q9D173 55 aa9.03□□□□□ -0.96
Nup88-203ENSMUST00000108531 Pdzd2E9Q1M1 2796 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Trav3-4A0A075B654 114 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Igkv1-35A0A0G2JDE5 120 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Hectd1Q69ZR2 2618 aaKnown RBP9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Defb29Q8BGW9 78 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Hivep2Q3UHF7 2430 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 B230359F08RikA0A0B4J1K3 109 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Spink4O35679 86 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Defb2P82020 71 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 BB014433Q8C5R5 389 aa9.02□□□□□ -0.97
Nup88-203ENSMUST00000108531 Pla2g1bQ9Z0Y2 146 aa9□□□□□ -0.97
Nup88-203ENSMUST00000108531 Helz2E9QAM5 2947 aaKnown RBP9□□□□□ -0.97
Nup88-203ENSMUST00000108531 PkigO70139 76 aa9□□□□□ -0.97
Nup88-203ENSMUST00000108531 Ly6c2P0CW03 131 aa9□□□□□ -0.97
Nup88-203ENSMUST00000108531 Myo9aQ8C170 2542 aa9□□□□□ -0.97
Nup88-203ENSMUST00000108531 Bles03Q8VD62 251 aa8.99□□□□□ -0.97
Nup88-203ENSMUST00000108531 Igkv1-99F6XWB2 120 aa8.99□□□□□ -0.97
Nup88-203ENSMUST00000108531 Ighv1-56A0A0A6YXG2 117 aa8.98□□□□□ -0.97
Nup88-203ENSMUST00000108531 Smim20D3Z7Q2 69 aa8.98□□□□□ -0.97
Nup88-203ENSMUST00000108531 Defa1P11477 93 aa8.98□□□□□ -0.97
Nup88-203ENSMUST00000108531 Odf3l2Q3TZ65 277 aa8.98□□□□□ -0.97
Nup88-203ENSMUST00000108531 Zfp951A0A087WRH0 451 aa8.98□□□□□ -0.97
Nup88-203ENSMUST00000108531 FlnaQ8BTM8 2647 aaKnown RBP8.98□□□□□ -0.97
Nup88-203ENSMUST00000108531 SmcpP15265 143 aa8.97□□□□□ -0.97
Nup88-203ENSMUST00000108531 Smim26Q3V460 107 aa8.97□□□□□ -0.97
Nup88-203ENSMUST00000108531 Apoc4Q61268 124 aa8.97□□□□□ -0.97
Nup88-203ENSMUST00000108531 Tmem223Q9CQE2 199 aaKnown RBP8.97□□□□□ -0.97
Nup88-203ENSMUST00000108531 Dnal4Q9DCM4 105 aa8.97□□□□□ -0.97
Nup88-203ENSMUST00000108531 Igkv4-53A0A0G2JFC6 119 aa8.96□□□□□ -0.97
Nup88-203ENSMUST00000108531 Wnk1P83741 2377 aa8.96□□□□□ -0.98
Nup88-203ENSMUST00000108531 Sprr1bQ62267 153 aa8.96□□□□□ -0.98
Nup88-203ENSMUST00000108531 Igfn1Q3KNY0 2849 aa8.96□□□□□ -0.98
Nup88-203ENSMUST00000108531 Trav13-1A0A075B644 110 aa8.95□□□□□ -0.98
Nup88-203ENSMUST00000108531 Tenm3Q9WTS6 2715 aa8.94□□□□□ -0.98
Nup88-203ENSMUST00000108531 Ank2Q8C8R3 3898 aa8.94□□□□□ -0.98
Nup88-203ENSMUST00000108531 Psors1c2Q80ZC9 134 aa8.94□□□□□ -0.98
Nup88-203ENSMUST00000108531 Trav13n-2A0A0G2JF93 110 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Igkv4-61A0A0G2JH00 117 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Defa16P50714 93 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Igkv6-13A0A0G2JGY3 119 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 1810062G17RikG3X8Y2 129 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Hbb-b2P02089 147 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Igf1P05017 153 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Gm5142Q8C5X9 133 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 4930519P11RikQ9CUJ8 166 aa8.93□□□□□ -0.98
Nup88-203ENSMUST00000108531 Igkv4-54A0A0G2JES9 117 aa8.92□□□□□ -0.98
Nup88-203ENSMUST00000108531 Scgb1b2O35176 93 aa8.92□□□□□ -0.98
Nup88-203ENSMUST00000108531 Tcl1b3P56842 122 aa8.92□□□□□ -0.98
Nup88-203ENSMUST00000108531 Defa25Q5G864 92 aa8.92□□□□□ -0.98
Nup88-203ENSMUST00000108531 Prss58Q8BW11 241 aa8.92□□□□□ -0.98
Nup88-203ENSMUST00000108531 Gm9767G3X930 207 aa8.91□□□□□ -0.98
Nup88-203ENSMUST00000108531 Unc79Q0KK59 2596 aa8.9□□□□□ -0.98
Nup88-203ENSMUST00000108531 C2cd3Q52KB6 2323 aa8.9□□□□□ -0.98
Nup88-203ENSMUST00000108531 Ighv1-59A0A0A6YXE0 117 aa8.9□□□□□ -0.98
Nup88-203ENSMUST00000108531 Ifitm6A0A1B0GS75 124 aa8.9□□□□□ -0.98
Nup88-203ENSMUST00000108531 Igkv8-18A0A0B4J1J3 123 aa8.9□□□□□ -0.99
Nup88-203ENSMUST00000108531 Gm5153P01627 120 aa8.9□□□□□ -0.99
Nup88-203ENSMUST00000108531 Rpl39lQ9CQD0 51 aa8.9□□□□□ -0.99
Nup88-203ENSMUST00000108531 Gm7102J3QQ10 178 aa8.89□□□□□ -0.99
Nup88-203ENSMUST00000108531 PrcdQ00LT2 53 aa8.89□□□□□ -0.99
Nup88-203ENSMUST00000108531 BsnO88737 3942 aa8.89□□□□□ -0.99
Nup88-203ENSMUST00000108531 Hist1h4aP62806 103 aaKnown RBP8.89□□□□□ -0.99
Nup88-203ENSMUST00000108531 Tmem86bQ497J1 226 aa8.88□□□□□ -0.99
Nup88-203ENSMUST00000108531 MtorQ9JLN9 2549 aa8.88□□□□□ -0.99
Nup88-203ENSMUST00000108531 Xirp2Q4U4S6 3784 aa8.88□□□□□ -0.99
Nup88-203ENSMUST00000108531 CubnQ9JLB4 3623 aa8.88□□□□□ -0.99
Nup88-203ENSMUST00000108531 Trav9n-4A0A075B631 113 aa8.88□□□□□ -0.99
Nup88-203ENSMUST00000108531 Ighv8-11A0A075B5X4 119 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 Krtap24-1G3X9A2 248 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 Prh1P05142 261 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 Ntn5Q3UQ22 452 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 Q8R092 253 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 C530025M09RikF6RGA8 229 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 Gm10845Q3UNY9 185 aa8.87□□□□□ -0.99
Nup88-203ENSMUST00000108531 Usp9yF8VPU6 2556 aa8.86□□□□□ -0.99
Nup88-203ENSMUST00000108531 NipblQ6KCD5 2798 aaKnown RBP8.86□□□□□ -0.99
Nup88-203ENSMUST00000108531 Trbv13-2A0A140T8N6 113 aa8.86□□□□□ -0.99
Nup88-203ENSMUST00000108531 Ankrd11E9Q4F7 2643 aa8.86□□□□□ -0.99
Nup88-203ENSMUST00000108531 Trav13-2A0A075B649 110 aa8.86□□□□□ -0.99
Nup88-203ENSMUST00000108531 Igkv3-9A0A140T8P4 119 aa8.86□□□□□ -0.99
Nup88-203ENSMUST00000108531 Csdc2Q91YQ3 154 aa8.85□□□□□ -0.99
Nup88-203ENSMUST00000108531 P01819 144 aa8.85□□□□□ -0.99
Nup88-203ENSMUST00000108531 Leap2Q91V13 76 aa8.85□□□□□ -0.99
Nup88-203ENSMUST00000108531 Defa2P28309 93 aa8.84□□□□□ -0.99
Nup88-203ENSMUST00000108531 D130052B06RikQ3UW13 202 aa8.84□□□□□ -0.99
Nup88-203ENSMUST00000108531 Epg5Q80TA9 2572 aa8.84□□□□□ -0.99
Nup88-203ENSMUST00000108531 Rpl18aP62717 176 aaKnown RBP8.83□□□□□ -1
Nup88-203ENSMUST00000108531 Klk9Q32M27 251 aa8.83□□□□□ -1
Nup88-203ENSMUST00000108531 Dand5Q76LW6 185 aa8.83□□□□□ -1
Nup88-203ENSMUST00000108531 Akap13E9Q394 2776 aa8.83□□□□□ -1
Nup88-203ENSMUST00000108531 7530416G11RikJ3QJX6 159 aa8.83□□□□□ -1
Nup88-203ENSMUST00000108531 MifP34884 115 aaKnown RBP8.83□□□□□ -1
Nup88-203ENSMUST00000108531 2010109I03RikQ9CQ11 111 aa8.83□□□□□ -1
Nup88-203ENSMUST00000108531 Q9DAA7 145 aa8.82□□□□□ -1
Nup88-203ENSMUST00000108531 Col7a1Q63870 2944 aa8.82□□□□□ -1
Nup88-203ENSMUST00000108531 ScxQ64124 207 aa8.82□□□□□ -1
Nup88-203ENSMUST00000108531 Klk11Q9QYN3 276 aa8.82□□□□□ -1
Nup88-203ENSMUST00000108531 Zfp462B1AWL2 2495 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms