RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Igkv3-3A0A140T8Q0 119 aa5.07□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Rnase13Q5GAM7 153 aa5.07□□□□□ -1.6
Cntn1-202ENSMUST00000068378 TprF6ZDS4 2431 aaKnown RBP5.07□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Lmo4P61969 165 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Gphb5Q812B2 130 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Fam216bQ8CC14 138 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Q9DAA7 145 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ighv2-5A0A0A6YY69 116 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Igkv6-14A0A140T8P1 115 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Lst1O08843 95 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Defb12Q8K4N3 78 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Trdv5A0A075B661 115 aa5.06□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Pcnx1Q9QYC1 2344 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Zfp292Q9Z2U2 2698 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Igkv1-117A0A140T8M0 119 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ighv1-49A0A0A6YWX2 117 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Igkv4-53A0A0G2JFC6 119 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Gm5617Q91VN2 117 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Gm10308Q9CVR5 141 aa5.05□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Plac8l1Q08EJ0 177 aa5.04□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Gm5941Q497P9 117 aa5.04□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ighv1-80A0A075B5Y3 117 aa5.04□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ighv2-6-8A0A0A6YWY9 116 aa5.04□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Higd2aQ9CQJ1 106 aa5.04□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ash1lQ99MY8 2958 aa5.03□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ighv12-3A0A075B5T1 117 aa5.03□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Prok1Q14A28 105 aa5.03□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Cdc42se1Q8BHL7 80 aa5.03□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Ighv1-11A0A0A6YWI9 117 aa5.03□□□□□ -1.6
Cntn1-202ENSMUST00000068378 Rpl36aP83882 106 aaKnown RBP5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Q8BT88 171 aa5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 3110070M22RikQ9DAQ7 118 aa5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 1700011M02RikB1AX35 88 aa5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm9513B3GLJ6 99 aa5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 P01823 113 aa5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 A830005F24RikQ8BRT5 167 aa5.02□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Q4KKZ1 196 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ndufa12Q7TMF3 145 aaKnown RBP5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 EpopQ7TNS8 369 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ubl5Q9EPV8 73 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ncor2Q9WU42 2472 aaKnown RBP5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Igkv2-109A0A075B5K6 120 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 P06320 134 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ighv3-6P18531 116 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ndufa11Q9D8B4 141 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Igkv3-12A0A140T8P0 119 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm3646F6S692 53 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 MsmbO08540 113 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Acyp1P56376 99 aa5.01□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ighv2-3A0A075B696 115 aa5□□□□□ -1.61
Cntn1-202ENSMUST00000068378 4930470P17RikQ9D542 155 aa5□□□□□ -1.61
Cntn1-202ENSMUST00000068378 1700010B08RikQ9DAI7 102 aa5□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm17660B9UIU9 90 aa5□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Mp68P56379 58 aa5□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ccl21bP86792 133 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ccl21cP86793 133 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ormdl1Q921I0 153 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Col6a6Q8C6K9 2265 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Igkv3-7A0A0G2JE31 119 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Spag11Q8K4N2 71 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Trav9d-4A0A0G2JG37 103 aa4.99□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Krtap27-1E9PX37 202 aa4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Atox1O08997 68 aaKnown RBP4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm9903Q8C9Y8 129 aa4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 SetxA2AKX3 2646 aa4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 SonQ9QX47 2444 aaKnown RBP4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Itpr1P11881 2749 aa4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Spta1P08032 2415 aa4.98□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm10577Q3UDV9 132 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gpha2Q925Q5 128 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Prp2P05143 317 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 9230109A22RikQ8BHE6 111 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Igkv8-27A0A0G2JF28 120 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Igkv8-30A0A140T8M3 121 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm16381A0A1Y7VKT9 73 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 P01786 117 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ndufc1Q9CQY9 76 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm17509Q9CZ61 145 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Gm16181B0V2H2 73 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 3110021N24RikJ3QMN2 152 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Ccl21aP84444 133 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 Cd52Q64389 74 aa4.97□□□□□ -1.61
Cntn1-202ENSMUST00000068378 P01755 137 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm5142Q8C5X9 133 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Wfdc15bQ9JHY4 80 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Cep250Q60952 2414 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ube2bP63147 152 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm10549Q3URY4 149 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 4930546C10RikE9Q4Y3 121 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Igfn1Q3KNY0 2849 aa4.96□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Igkv4-91A0A075B5L2 119 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ighv3-4A0A0A6YXF1 117 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 A0A286YCN5 57 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Odf3l2Q3TZ65 277 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm10845Q3UNY9 185 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Rpl39lQ9CQD0 51 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm16485Q8C4B7 115 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Phf5aP83870 110 aaKnown RBP4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ndufs7Q9DC70 224 aa4.95□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ighv1-56A0A0A6YXG2 117 aa4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms