RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Ube2uB1AUC4 352 aa14.07□□□□□ -0.16
Cntn1-202ENSMUST00000068378 Ehmt2Q9Z148 1263 aaKnown RBP13.28□□□□□ -0.28
Cntn1-202ENSMUST00000068378 Ttbk1Q6PCN3 1308 aa12.91□□□□□ -0.34
Cntn1-202ENSMUST00000068378 Ppargc1bQ8VHJ7 1014 aa12.83□□□□□ -0.36
Cntn1-202ENSMUST00000068378 DiexfQ8BTT6 772 aaKnown RBP12.8□□□□□ -0.36
Cntn1-202ENSMUST00000068378 Kcna4Q61423 654 aa12.75□□□□□ -0.37
Cntn1-202ENSMUST00000068378 Mapk8ip2Q9ERE9 830 aa12.65□□□□□ -0.38
Cntn1-202ENSMUST00000068378 Plppr3Q7TPB0 716 aa12.4□□□□□ -0.42
Cntn1-202ENSMUST00000068378 Chic1Q8CBW7 227 aa12.4□□□□□ -0.42
Cntn1-202ENSMUST00000068378 ArxO35085 564 aa12.39□□□□□ -0.43
Cntn1-202ENSMUST00000068378 Pcgf6Q99NA9 353 aa12.34□□□□□ -0.43
Cntn1-202ENSMUST00000068378 Rpgrip1Q9EPQ2 1331 aa12.18□□□□□ -0.46
Cntn1-202ENSMUST00000068378 Arid3aQ62431 601 aa12.14□□□□□ -0.47
Cntn1-202ENSMUST00000068378 Rhox8Q6VSS7 320 aa12.04□□□□□ -0.48
Cntn1-202ENSMUST00000068378 CatipB9EKE5 520 aa11.94□□□□□ -0.5
Cntn1-202ENSMUST00000068378 Prdm10Q3UTQ7 1184 aa11.91□□□□□ -0.5
Cntn1-202ENSMUST00000068378 Bcl11aQ9QYE3 773 aa11.86□□□□□ -0.51
Cntn1-202ENSMUST00000068378 Neurod1Q60867 357 aa11.84□□□□□ -0.51
Cntn1-202ENSMUST00000068378 Gm35339A0A140LHH9 1649 aa11.82□□□□□ -0.52
Cntn1-202ENSMUST00000068378 UbtfP25976 765 aaKnown RBP11.82□□□□□ -0.52
Cntn1-202ENSMUST00000068378 Prdm16A2A935 1275 aa11.82□□□□□ -0.52
Cntn1-202ENSMUST00000068378 Fam71e1A1L3C1 212 aa11.81□□□□□ -0.52
Cntn1-202ENSMUST00000068378 CenpbP27790 599 aa11.81□□□□□ -0.52
Cntn1-202ENSMUST00000068378 PrkcshO08795 521 aa11.77□□□□□ -0.53
Cntn1-202ENSMUST00000068378 1700123L14RikQ3V2K7 440 aa11.77□□□□□ -0.53
Cntn1-202ENSMUST00000068378 Phf23Q8BSN5 401 aa11.74□□□□□ -0.53
Cntn1-202ENSMUST00000068378 Slc4a1apE9PX68 744 aa11.73□□□□□ -0.53
Cntn1-202ENSMUST00000068378 Taok2Q6ZQ29 1240 aa11.72□□□□□ -0.53
Cntn1-202ENSMUST00000068378 Acin1Q9JIX8 1338 aaKnown RBP11.72□□□□□ -0.53
Cntn1-202ENSMUST00000068378 NischQ80TM9 1593 aa11.68□□□□□ -0.54
Cntn1-202ENSMUST00000068378 Myt1Q8CFC2 1127 aa11.66□□□□□ -0.54
Cntn1-202ENSMUST00000068378 Las1lA2BE28 776 aaKnown RBP11.61□□□□□ -0.55
Cntn1-202ENSMUST00000068378 Q8BT18 775 aa11.6□□□□□ -0.55
Cntn1-202ENSMUST00000068378 Supt5hO55201 1082 aaKnown RBP11.57□□□□□ -0.56
Cntn1-202ENSMUST00000068378 Amer1Q7TS75 1132 aa11.52□□□□□ -0.57
Cntn1-202ENSMUST00000068378 Csrnp3P59055 597 aa11.5□□□□□ -0.57
Cntn1-202ENSMUST00000068378 Gab3Q8BSM5 595 aa11.5□□□□□ -0.57
Cntn1-202ENSMUST00000068378 Npm2Q80W85 207 aa11.49□□□□□ -0.57
Cntn1-202ENSMUST00000068378 Ifnlr1Q8CGK5 535 aa11.43□□□□□ -0.58
Cntn1-202ENSMUST00000068378 Ecm2Q5FW85 670 aa11.42□□□□□ -0.58
Cntn1-202ENSMUST00000068378 Vsig10D3YX43 558 aa11.38□□□□□ -0.59
Cntn1-202ENSMUST00000068378 Trim41Q5NCC3 630 aa11.35□□□□□ -0.59
Cntn1-202ENSMUST00000068378 Abcc9P70170 1546 aa11.3□□□□□ -0.6
Cntn1-202ENSMUST00000068378 Abcc8B2RUS7 1588 aa11.3□□□□□ -0.6
Cntn1-202ENSMUST00000068378 Tshz2Q68FE9 1030 aa11.28□□□□□ -0.6
Cntn1-202ENSMUST00000068378 Gm38655A0A286YDK6 273 aa11.26□□□□□ -0.61
Cntn1-202ENSMUST00000068378 AcrbpQ3V140 540 aa11.24□□□□□ -0.61
Cntn1-202ENSMUST00000068378 Ripply1Q2WG77 201 aa11.22□□□□□ -0.61
Cntn1-202ENSMUST00000068378 Dmrt2Q8BG36 561 aa11.2□□□□□ -0.62
Cntn1-202ENSMUST00000068378 Senp3Q9EP97 568 aaKnown RBP11.2□□□□□ -0.62
Cntn1-202ENSMUST00000068378 Esf1Q3V1V3 845 aaKnown RBP11.16□□□□□ -0.62
Cntn1-202ENSMUST00000068378 Anks4bQ8K3X6 423 aa11.15□□□□□ -0.62
Cntn1-202ENSMUST00000068378 Pde4cQ3UEI1 686 aa11.14□□□□□ -0.63
Cntn1-202ENSMUST00000068378 Aplp2Q06335 707 aa11.14□□□□□ -0.63
Cntn1-202ENSMUST00000068378 Ncbp3Q8BZR9 615 aaKnown RBP11.12□□□□□ -0.63
Cntn1-202ENSMUST00000068378 Os9Q8K2C7 672 aa10.99□□□□□ -0.65
Cntn1-202ENSMUST00000068378 Pknox2Q8BG99 474 aa10.98□□□□□ -0.65
Cntn1-202ENSMUST00000068378 Pelp1Q9DBD5 1123 aaKnown RBP10.97□□□□□ -0.65
Cntn1-202ENSMUST00000068378 Rsph4aQ8BYM7 716 aa10.92□□□□□ -0.66
Cntn1-202ENSMUST00000068378 Rtn4Q99P72 1162 aaKnown RBP10.92□□□□□ -0.66
Cntn1-202ENSMUST00000068378 Hdac5Q9Z2V6 1113 aa10.92□□□□□ -0.66
Cntn1-202ENSMUST00000068378 Fgd1P52734 960 aa10.9□□□□□ -0.66
Cntn1-202ENSMUST00000068378 Zeb1Q64318 1117 aa10.89□□□□□ -0.67
Cntn1-202ENSMUST00000068378 Sall2Q9QX96 1004 aa10.88□□□□□ -0.67
Cntn1-202ENSMUST00000068378 Nlrp6Q91WS2 869 aa10.87□□□□□ -0.67
Cntn1-202ENSMUST00000068378 Cngb1E1AZ71 1325 aa10.87□□□□□ -0.67
Cntn1-202ENSMUST00000068378 ScribQ80U72 1612 aa10.87□□□□□ -0.67
Cntn1-202ENSMUST00000068378 Plcd4Q8K3R3 807 aa10.85□□□□□ -0.67
Cntn1-202ENSMUST00000068378 Skap1Q3UUV5 355 aa10.79□□□□□ -0.68
Cntn1-202ENSMUST00000068378 NrdcQ8BHG1 1161 aa10.75□□□□□ -0.69
Cntn1-202ENSMUST00000068378 Eif5bQ05D44 1216 aaKnown RBP10.74□□□□□ -0.69
Cntn1-202ENSMUST00000068378 4930567H17RikQ3V0K5 233 aa10.7□□□□□ -0.7
Cntn1-202ENSMUST00000068378 MyclP10166 368 aa10.7□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Prm3Q62100 101 aa10.7□□□□□ -0.7
Cntn1-202ENSMUST00000068378 SafbD3YXK2 937 aaKnown RBP10.69□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Zbtb7cQ8VCZ7 619 aa10.69□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Gtf3c5Q8R2T8 520 aa10.69□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Stag3O70576 1240 aa10.67□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Il27Q8K3I6 234 aa10.66□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Dcaf1Q80TR8 1506 aa10.66□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Zfp777B9EKF4 885 aa10.65□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Ccdc180J3QNE4 1664 aa10.65□□□□□ -0.7
Cntn1-202ENSMUST00000068378 Cdk11bP24788 784 aaKnown RBP10.63□□□□□ -0.71
Cntn1-202ENSMUST00000068378 Aebp2Q9Z248 504 aaKnown RBP10.6□□□□□ -0.71
Cntn1-202ENSMUST00000068378 TimelessQ9R1X4 1197 aa10.59□□□□□ -0.71
Cntn1-202ENSMUST00000068378 NacadQ5SWP3 1504 aa10.58□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Nop58Q6DFW4 536 aaKnown RBP10.57□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Gtf3c3Q3TMP1 882 aa10.57□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Rad21Q61550 635 aaKnown RBP10.55□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Cdca7Q9D0M2 382 aa10.54□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Zbtb38Q3LR78 1197 aa10.53□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Kdm5dQ62240 1548 aa10.53□□□□□ -0.72
Cntn1-202ENSMUST00000068378 Gm13697A2AK42 830 aa10.51□□□□□ -0.73
Cntn1-202ENSMUST00000068378 Atf5O70191 283 aa10.5□□□□□ -0.73
Cntn1-202ENSMUST00000068378 Hnrnpul2Q00PI9 745 aaKnown RBP10.48□□□□□ -0.73
Cntn1-202ENSMUST00000068378 Igsf3Q6ZQA6 1194 aa10.47□□□□□ -0.73
Cntn1-202ENSMUST00000068378 Scaf1Q5U4C3 1256 aaKnown RBP10.47□□□□□ -0.73
Cntn1-202ENSMUST00000068378 Rtl1Q7M732 1744 aa10.46□□□□□ -0.74
Cntn1-202ENSMUST00000068378 BccipQ9CWI3 316 aa10.45□□□□□ -0.74
Cntn1-202ENSMUST00000068378 Kiaa1211Q5PR69 1207 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 148.2 ms