RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Col6a5A6H584 2640 aa15.82■□□□□ 0.12
Cln6-201ENSMUST00000034776 Trav7-6A0A075B640 112 aa15.82■□□□□ 0.12
Cln6-201ENSMUST00000034776 Pxt1Q8K459 51 aa15.81■□□□□ 0.12
Cln6-201ENSMUST00000034776 Defb10Q8R2I8 73 aa15.81■□□□□ 0.12
Cln6-201ENSMUST00000034776 4930415O20RikQ8CDT5 131 aa15.8■□□□□ 0.12
Cln6-201ENSMUST00000034776 PtprqP0C5E4 2300 aa15.8■□□□□ 0.12
Cln6-201ENSMUST00000034776 Defb50Q6TU36 73 aa15.8■□□□□ 0.12
Cln6-201ENSMUST00000034776 Ighv8-13A0A075B5Y0 101 aa15.79■□□□□ 0.12
Cln6-201ENSMUST00000034776 Igkv6-13A0A0G2JGY3 119 aa15.79■□□□□ 0.12
Cln6-201ENSMUST00000034776 Hint1P70349 126 aaKnown RBP15.79■□□□□ 0.12
Cln6-201ENSMUST00000034776 NrepQ07475 68 aa15.79■□□□□ 0.12
Cln6-201ENSMUST00000034776 Spata3Q9D9T6 193 aa15.79■□□□□ 0.12
Cln6-201ENSMUST00000034776 Gm45213A0A0U1RNZ6 101 aa15.78■□□□□ 0.12
Cln6-201ENSMUST00000034776 6430550D23RikE9Q1X6 194 aa15.78■□□□□ 0.12
Cln6-201ENSMUST00000034776 Sostdc1Q9CQN4 206 aa15.78■□□□□ 0.12
Cln6-201ENSMUST00000034776 Zc2hc1bQ9D534 172 aa15.78■□□□□ 0.12
Cln6-201ENSMUST00000034776 Ighv8-11A0A075B5X4 119 aa15.77■□□□□ 0.11
Cln6-201ENSMUST00000034776 Rpl32-psP17932 135 aa15.77■□□□□ 0.11
Cln6-201ENSMUST00000034776 Igkv3-9A0A140T8P4 119 aa15.76■□□□□ 0.11
Cln6-201ENSMUST00000034776 1700011M02RikB1AX35 88 aa15.75■□□□□ 0.11
Cln6-201ENSMUST00000034776 Rpl13aP19253 203 aaKnown RBP15.74■□□□□ 0.11
Cln6-201ENSMUST00000034776 Gm10577Q3UDV9 132 aa15.74■□□□□ 0.11
Cln6-201ENSMUST00000034776 Gm11020F6ZGD5 61 aa15.73■□□□□ 0.11
Cln6-201ENSMUST00000034776 Cops9Q3U898 57 aa15.73■□□□□ 0.11
Cln6-201ENSMUST00000034776 Cryba4Q9JJV0 196 aa15.73■□□□□ 0.11
Cln6-201ENSMUST00000034776 Trav9d-4A0A0G2JG37 103 aa15.72■□□□□ 0.11
Cln6-201ENSMUST00000034776 Dnah3Q8BW94 4083 aa15.71■□□□□ 0.11
Cln6-201ENSMUST00000034776 Gm7137J3QMW1 236 aa15.7■□□□□ 0.1
Cln6-201ENSMUST00000034776 Ighv2-9-1A0A075B697 116 aa15.7■□□□□ 0.1
Cln6-201ENSMUST00000034776 P01755 137 aa15.7■□□□□ 0.1
Cln6-201ENSMUST00000034776 Defb47Q30KN1 79 aa15.7■□□□□ 0.1
Cln6-201ENSMUST00000034776 Try10Q792Z1 246 aaKnown RBP15.7■□□□□ 0.1
Cln6-201ENSMUST00000034776 Cox11Q6P8I6 275 aa15.69■□□□□ 0.1
Cln6-201ENSMUST00000034776 Eif4ebp3Q80VV3 101 aa15.68■□□□□ 0.1
Cln6-201ENSMUST00000034776 Prh1P05142 261 aa15.68■□□□□ 0.1
Cln6-201ENSMUST00000034776 Notch1Q01705 2531 aa15.68■□□□□ 0.1
Cln6-201ENSMUST00000034776 Dnah10D3YYQ8 4591 aa15.67■□□□□ 0.1
Cln6-201ENSMUST00000034776 4930544G11RikQ9CR99 193 aa15.67■□□□□ 0.1
Cln6-201ENSMUST00000034776 Trav9n-4A0A075B631 113 aa15.67■□□□□ 0.1
Cln6-201ENSMUST00000034776 Dnah6E9Q0B6 4144 aa15.66■□□□□ 0.1
Cln6-201ENSMUST00000034776 Lst1O08843 95 aa15.64■□□□□ 0.09
Cln6-201ENSMUST00000034776 Gm10135F6TEE5 83 aa15.63■□□□□ 0.09
Cln6-201ENSMUST00000034776 Snhg11Q4G0K9 87 aa15.63■□□□□ 0.09
Cln6-201ENSMUST00000034776 Ly6hQ9WUC3 139 aa15.63■□□□□ 0.09
Cln6-201ENSMUST00000034776 Igkv8-34A0A0G2JDU0 121 aa15.62■□□□□ 0.09
Cln6-201ENSMUST00000034776 Bles03Q8VD62 251 aa15.62■□□□□ 0.09
Cln6-201ENSMUST00000034776 B230359F08RikA0A0B4J1K3 109 aa15.62■□□□□ 0.09
Cln6-201ENSMUST00000034776 Gtf2h5Q8K2X8 71 aa15.62■□□□□ 0.09
Cln6-201ENSMUST00000034776 Krtap11-1E9Q2E9 183 aa15.61■□□□□ 0.09
Cln6-201ENSMUST00000034776 Prss58Q8BW11 241 aa15.61■□□□□ 0.09
Cln6-201ENSMUST00000034776 Lage3Q9CR70 148 aa15.61■□□□□ 0.09
Cln6-201ENSMUST00000034776 VwfQ8CIZ8 2813 aa15.61■□□□□ 0.09
Cln6-201ENSMUST00000034776 Gm16181B0V2H2 73 aa15.6■□□□□ 0.09
Cln6-201ENSMUST00000034776 CenpwQ3URR0 86 aa15.6■□□□□ 0.09
Cln6-201ENSMUST00000034776 EnhoQ8K1D8 76 aa15.6■□□□□ 0.09
Cln6-201ENSMUST00000034776 Dnah14A0A140LIJ4 4489 aa15.6■□□□□ 0.09
Cln6-201ENSMUST00000034776 MalO09198 153 aa15.59■□□□□ 0.09
Cln6-201ENSMUST00000034776 Pfn2Q9JJV2 140 aa15.59■□□□□ 0.09
Cln6-201ENSMUST00000034776 PemtQ61907 199 aa15.59■□□□□ 0.09
Cln6-201ENSMUST00000034776 Gm4861Q8C5A4 106 aa15.59■□□□□ 0.09
Cln6-201ENSMUST00000034776 Gm10647E9Q8X0 124 aa15.58■□□□□ 0.08
Cln6-201ENSMUST00000034776 Gm10549Q3URY4 149 aa15.58■□□□□ 0.08
Cln6-201ENSMUST00000034776 SpinklQ8CEK3 90 aa15.58■□□□□ 0.08
Cln6-201ENSMUST00000034776 Igkv3-1A0A075B5P1 119 aa15.57■□□□□ 0.08
Cln6-201ENSMUST00000034776 Fam240bJ3QMB3 78 aa15.57■□□□□ 0.08
Cln6-201ENSMUST00000034776 E130208F15RikQ3UPV3 143 aa15.57■□□□□ 0.08
Cln6-201ENSMUST00000034776 Mzt1Q8BUR9 78 aa15.57■□□□□ 0.08
Cln6-201ENSMUST00000034776 Gm29423A0A087WRM1 55 aa15.56■□□□□ 0.08
Cln6-201ENSMUST00000034776 Cks1bP61025 79 aa15.56■□□□□ 0.08
Cln6-201ENSMUST00000034776 2010109I03RikQ9CQ11 111 aa15.56■□□□□ 0.08
Cln6-201ENSMUST00000034776 AplnQ9R0R4 77 aa15.55■□□□□ 0.08
Cln6-201ENSMUST00000034776 Gm11213A0A1B0GR83 88 aa15.55■□□□□ 0.08
Cln6-201ENSMUST00000034776 SelenowP63300 88 aa15.55■□□□□ 0.08
Cln6-201ENSMUST00000034776 Tmem86bQ497J1 226 aa15.54■□□□□ 0.08
Cln6-201ENSMUST00000034776 Phpt1Q9DAK9 124 aa15.54■□□□□ 0.08
Cln6-201ENSMUST00000034776 C530025M09RikF6RGA8 229 aa15.53■□□□□ 0.08
Cln6-201ENSMUST00000034776 Hrct1Q9D6B9 109 aa15.53■□□□□ 0.08
Cln6-201ENSMUST00000034776 Wdr38Q9D994 303 aa15.53■□□□□ 0.08
Cln6-201ENSMUST00000034776 Ighv1-56A0A0A6YXG2 117 aa15.53■□□□□ 0.08
Cln6-201ENSMUST00000034776 Reg3bP35230 175 aa15.49■□□□□ 0.07
Cln6-201ENSMUST00000034776 Ndufa12Q7TMF3 145 aaKnown RBP15.49■□□□□ 0.07
Cln6-201ENSMUST00000034776 Cox6cQ9CPQ1 76 aa15.49■□□□□ 0.07
Cln6-201ENSMUST00000034776 Gm867A0A1W2P7T4 151 aa15.48■□□□□ 0.07
Cln6-201ENSMUST00000034776 Igkv1-117A0A140T8M0 119 aa15.47■□□□□ 0.07
Cln6-201ENSMUST00000034776 Lgals4Q8K419 326 aa15.47■□□□□ 0.07
Cln6-201ENSMUST00000034776 Ociad2Q9D8W7 154 aa15.47■□□□□ 0.07
Cln6-201ENSMUST00000034776 P01896 185 aa15.46■□□□□ 0.07
Cln6-201ENSMUST00000034776 Trav13-1A0A075B644 110 aa15.46■□□□□ 0.06
Cln6-201ENSMUST00000034776 Rpl28P41105 137 aaKnown RBP15.46■□□□□ 0.06
Cln6-201ENSMUST00000034776 Sslp1Q3UN54 99 aa15.45■□□□□ 0.06
Cln6-201ENSMUST00000034776 Tcl1b5P56845 121 aa15.44■□□□□ 0.06
Cln6-201ENSMUST00000034776 Tcl1b3P56842 122 aa15.44■□□□□ 0.06
Cln6-201ENSMUST00000034776 Dnah17Q69Z23 4481 aa15.43■□□□□ 0.06
Cln6-201ENSMUST00000034776 TnxbO35452 4006 aa15.43■□□□□ 0.06
Cln6-201ENSMUST00000034776 Pglyrp4Q0VB07 374 aa15.43■□□□□ 0.06
Cln6-201ENSMUST00000034776 Igsf10Q3V1M1 2594 aa15.42■□□□□ 0.06
Cln6-201ENSMUST00000034776 Ighv2-9A0A075B5Q5 116 aa15.42■□□□□ 0.06
Cln6-201ENSMUST00000034776 Ighv13-2A0A0A6YWN3 119 aa15.42■□□□□ 0.06
Cln6-201ENSMUST00000034776 Igkv8-24A0A140T8P5 121 aa15.42■□□□□ 0.06
Cln6-201ENSMUST00000034776 Defa2P28309 93 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 77.1 ms