RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 P01755 137 aa10.51□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Brwd1Q921C3 2304 aa10.5□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Spink4O35679 86 aa10.5□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Gm43218A0A0G2JGT0 114 aa10.5□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 SbsponQ3UPR9 264 aa10.5□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 B230359F08RikA0A0B4J1K3 109 aa10.49□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Gm10251J3QPM5 127 aa10.49□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Cox6b1P56391 86 aaKnown RBP10.49□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 TeppQ6IMH0 216 aa10.49□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Bles03Q8VD62 251 aa10.49□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Gm10549Q3URY4 149 aa10.49□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Igkv4-54A0A0G2JES9 117 aa10.48□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Igkv4-53A0A0G2JFC6 119 aa10.48□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Pglyrp4Q0VB07 374 aa10.48□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Ndufa12Q7TMF3 145 aaKnown RBP10.48□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Ss18l2Q9D174 77 aa10.48□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Tm2d2Q8R0I4 213 aa10.47□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Spry2Q9QXV8 315 aa10.47□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Vmo1Q5SXG7 201 aa10.47□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 MrapQ9D159 127 aa10.47□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Igkv1-117A0A140T8M0 119 aa10.46□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 CdsnQ7TPC1 561 aa10.46□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Tmem213Q08EA8 116 aa10.46□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Dand5Q76LW6 185 aa10.45□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Odf3l2Q3TZ65 277 aa10.45□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Gm3233E9Q2H5 230 aa10.45□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Rpl28P41105 137 aaKnown RBP10.44□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Gm904Q3V2L5 102 aa10.44□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Defb29Q8BGW9 78 aa10.44□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Leap2Q91V13 76 aa10.44□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Zfp951A0A087WRH0 451 aa10.43□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Igkv4-61A0A0G2JH00 117 aa10.43□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Prh1P05142 261 aa10.43□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Nhlrc1Q8BR37 401 aa10.43□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 PrcdQ00LT2 53 aa10.43□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Igkv1-35A0A0G2JDE5 120 aa10.42□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Igkv1-99F6XWB2 120 aa10.42□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Ighv2-9-1A0A075B697 116 aa10.42□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Q8R092 253 aa10.42□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Ighv1-59A0A0A6YXE0 117 aa10.41□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Igkv6-13A0A0G2JGY3 119 aa10.41□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 5730596B20RikQ8BQ08 205 aa10.4□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Trav13-1A0A075B644 110 aa10.4□□□□□ -0.74
Nkx3-1-201ENSMUST00000022646 Foxc1Q61572 553 aa10.4□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Tmem223Q9CQE2 199 aaKnown RBP10.4□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 4930524J08RikQ9CUJ5 163 aa10.4□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Prss58Q8BW11 241 aa10.39□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Prr13Q9CQJ5 137 aa10.39□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 CrygfQ9CXV3 174 aa10.39□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Trav14d-3-dv8A0A075B619 120 aa10.38□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Atp5eP56382 52 aa10.38□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Sprr1bQ62267 153 aa10.38□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Hivep3A2A884 2348 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Gm16381A0A1Y7VKT9 73 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Tenm4Q3UHK6 2771 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Trbv13-2A0A140T8N6 113 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 CrygdP04342 174 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 CrygeQ03740 174 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Tex15F8VPN2 2785 aa10.37□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 D730001G18RikA0A087WQU7 115 aa10.36□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Trav13n-2A0A0G2JF93 110 aa10.35□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Esm1Q9QYY7 184 aa10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Nbeal2Q6ZQA0 2742 aa10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 CicQ924A2 2510 aa10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Trav9n-4A0A075B631 113 aa10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Dad1P61804 113 aa10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Psors1c2Q80ZC9 134 aa10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Fbn1Q61554 2873 aaKnown RBP10.34□□□□□ -0.75
Nkx3-1-201ENSMUST00000022646 Acyp1P56376 99 aa10.33□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Znf414Q9DCK4 299 aa10.33□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Dnal4Q9DCM4 105 aa10.33□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 A830031A19RikQ8BNT5 113 aa10.32□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Igkv3-9A0A140T8P4 119 aa10.32□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Mzt1Q8BUR9 78 aa10.32□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Xcl1P47993 114 aa10.32□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Higd2aQ9CQJ1 106 aa10.32□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Cmc4Q61908 68 aa10.31□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Trav13-2A0A075B649 110 aa10.31□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 2010109I03RikQ9CQ11 111 aa10.31□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Tmem86bQ497J1 226 aa10.3□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Gm5142Q8C5X9 133 aa10.3□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Ighv1-56A0A0A6YXG2 117 aa10.3□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Klk9Q32M27 251 aa10.3□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 C530025M09RikF6RGA8 229 aa10.3□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Smim26Q3V460 107 aa10.3□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Igkv8-18A0A0B4J1J3 123 aa10.28□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 MifP34884 115 aaKnown RBP10.28□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Tenm1Q9WTS4 2731 aa10.27□□□□□ -0.76
Nkx3-1-201ENSMUST00000022646 Gm5153P01627 120 aa10.26□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Klk11Q9QYN3 276 aa10.26□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Rpl39lQ9CQD0 51 aa10.26□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Trav3-4A0A075B654 114 aa10.25□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 1810062G17RikG3X8Y2 129 aa10.25□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Gm7102J3QQ10 178 aa10.25□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Tcl1b3P56842 122 aa10.24□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Gm867A0A1W2P7T4 151 aa10.24□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Krtap11-1E9Q2E9 183 aa10.24□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Hbb-b2P02089 147 aa10.24□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Defa1P11477 93 aa10.24□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Wfdc12Q9JHY3 85 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms