RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 PlaurP35456 327 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Gm9903Q8C9Y8 129 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 SetxA2AKX3 2646 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Dynlrb2Q9DAJ5 96 aa8.67□□□□□ -1.02
Trim23-201ENSMUST00000022225 Gm11213A0A1B0GR83 88 aa8.67□□□□□ -1.02
Trim23-201ENSMUST00000022225 Defa20Q45VN2 95 aa8.67□□□□□ -1.02
Trim23-201ENSMUST00000022225 Fam110dQ80X91 271 aa8.67□□□□□ -1.02
Trim23-201ENSMUST00000022225 Ubl5Q9EPV8 73 aa8.67□□□□□ -1.02
Trim23-201ENSMUST00000022225 Trbv30A0A0B4J1P1 111 aa8.66□□□□□ -1.02
Trim23-201ENSMUST00000022225 4930470P17RikQ9D542 155 aa8.66□□□□□ -1.02
Trim23-201ENSMUST00000022225 Spg11Q3UHA3 2430 aa8.66□□□□□ -1.02
Trim23-201ENSMUST00000022225 4930556J24RikQ9D4U7 146 aa8.66□□□□□ -1.02
Trim23-201ENSMUST00000022225 Sorl1O88307 2215 aaKnown RBP8.65□□□□□ -1.02
Trim23-201ENSMUST00000022225 A530084C06RikQ3UTW2 186 aa8.65□□□□□ -1.02
Trim23-201ENSMUST00000022225 Bean1Q9EQG5 255 aa8.65□□□□□ -1.02
Trim23-201ENSMUST00000022225 Akap6E9Q9K8 2307 aa8.65□□□□□ -1.02
Trim23-201ENSMUST00000022225 Ndufc1Q9CQY9 76 aa8.65□□□□□ -1.03
Trim23-201ENSMUST00000022225 Chd9Q8BYH8 2885 aa8.65□□□□□ -1.03
Trim23-201ENSMUST00000022225 Ighv2-9A0A075B5Q5 116 aa8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 Prpf8Q99PV0 2335 aaKnown RBP8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 Igkv1-110A0A0B4J1I0 119 aa8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 Reg3gO09049 174 aa8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 Bles03Q8VD62 251 aa8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 MplkipQ9D011 178 aa8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 Gm3285A0A1W2P7U0 201 aa8.64□□□□□ -1.03
Trim23-201ENSMUST00000022225 Trav13-1A0A075B644 110 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Lamtor3O88653 124 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Gm5153P01627 120 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 P01786 117 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Igkv2-109A0A075B5K6 120 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Igkv8-27A0A0G2JF28 120 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Igkv8-30A0A140T8M3 121 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Pet100P0DJE0 76 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Q99M08 65 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Defa27F2Z403 93 aa8.63□□□□□ -1.03
Trim23-201ENSMUST00000022225 Inafm2A0A1L1STD6 152 aa8.62□□□□□ -1.03
Trim23-201ENSMUST00000022225 Fam19a3Q7TPG6 132 aa8.62□□□□□ -1.03
Trim23-201ENSMUST00000022225 Ubr5Q80TP3 2792 aa8.62□□□□□ -1.03
Trim23-201ENSMUST00000022225 Odf3l2Q3TZ65 277 aa8.62□□□□□ -1.03
Trim23-201ENSMUST00000022225 Ankhd1E9PUR0 2548 aaKnown RBP8.62□□□□□ -1.03
Trim23-201ENSMUST00000022225 Ighv1-49A0A0A6YWX2 117 aa8.61□□□□□ -1.03
Trim23-201ENSMUST00000022225 MobpQ9D2P8 170 aa8.61□□□□□ -1.03
Trim23-201ENSMUST00000022225 Pou2af1Q64693 256 aa8.61□□□□□ -1.03
Trim23-201ENSMUST00000022225 Zfp292Q9Z2U2 2698 aa8.61□□□□□ -1.03
Trim23-201ENSMUST00000022225 Trbv13-2A0A140T8N6 113 aa8.61□□□□□ -1.03
Trim23-201ENSMUST00000022225 Igkv4-53A0A0G2JFC6 119 aa8.6□□□□□ -1.03
Trim23-201ENSMUST00000022225 Trav13d-4A0A0G2JFX3 110 aa8.6□□□□□ -1.03
Trim23-201ENSMUST00000022225 LystP97412 3788 aa8.59□□□□□ -1.03
Trim23-201ENSMUST00000022225 Notch3Q61982 2318 aa8.59□□□□□ -1.03
Trim23-201ENSMUST00000022225 Ighv1-58A0A075B5W9 117 aa8.59□□□□□ -1.03
Trim23-201ENSMUST00000022225 Ighv2-5A0A0A6YY69 116 aa8.59□□□□□ -1.03
Trim23-201ENSMUST00000022225 Gm10772F7AIG4 85 aa8.58□□□□□ -1.04
Trim23-201ENSMUST00000022225 Defb26Q30KN7 186 aa8.58□□□□□ -1.04
Trim23-201ENSMUST00000022225 Igkv8-26A0A075B5N5 123 aa8.58□□□□□ -1.04
Trim23-201ENSMUST00000022225 E130114P18RikF6S0S7 154 aa8.58□□□□□ -1.04
Trim23-201ENSMUST00000022225 Gm10320E9PW43 113 aa8.57□□□□□ -1.04
Trim23-201ENSMUST00000022225 Rbm3O89086 153 aaKnown RBP8.57□□□□□ -1.04
Trim23-201ENSMUST00000022225 Igkv8-18A0A0B4J1J3 123 aa8.57□□□□□ -1.04
Trim23-201ENSMUST00000022225 Gm17689B3GLJ4 109 aa8.56□□□□□ -1.04
Trim23-201ENSMUST00000022225 UqcrqQ9CQ69 82 aa8.56□□□□□ -1.04
Trim23-201ENSMUST00000022225 A830005F24RikQ8BRT5 167 aa8.56□□□□□ -1.04
Trim23-201ENSMUST00000022225 NbeaQ9EPN1 2936 aa8.56□□□□□ -1.04
Trim23-201ENSMUST00000022225 Vpreb2P13373 142 aa8.55□□□□□ -1.04
Trim23-201ENSMUST00000022225 Tcl1b3P56842 122 aa8.55□□□□□ -1.04
Trim23-201ENSMUST00000022225 Klk12B2RVZ0 247 aa8.55□□□□□ -1.04
Trim23-201ENSMUST00000022225 Trav9d-3A0A075B695 113 aa8.54□□□□□ -1.04
Trim23-201ENSMUST00000022225 P01819 144 aa8.54□□□□□ -1.04
Trim23-201ENSMUST00000022225 Gm28374F6SG70 93 aa8.54□□□□□ -1.04
Trim23-201ENSMUST00000022225 Ube2e2Q91W82 201 aa8.54□□□□□ -1.04
Trim23-201ENSMUST00000022225 Ighv10-1A0A0B4J1J6 119 aa8.54□□□□□ -1.04
Trim23-201ENSMUST00000022225 Higd2aQ9CQJ1 106 aa8.52□□□□□ -1.04
Trim23-201ENSMUST00000022225 Csmd2V9GX34 3611 aa8.51□□□□□ -1.05
Trim23-201ENSMUST00000022225 Gm10401E9Q3K6 71 aa8.51□□□□□ -1.05
Trim23-201ENSMUST00000022225 Sec16aA2AIX1 2377 aa8.51□□□□□ -1.05
Trim23-201ENSMUST00000022225 Igkv4-72A0A0B4J1I4 117 aa8.51□□□□□ -1.05
Trim23-201ENSMUST00000022225 A930002H24RikQ8C8Y3 163 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 Defa28D3Z1V9 94 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 Gm10570F6VB42 170 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 Nop10Q9CQS2 64 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 Gm3443F7CCV5 94 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 Sec61gP60060 68 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 A730071L15RikQ8C4X0 137 aa8.5□□□□□ -1.05
Trim23-201ENSMUST00000022225 Cox7a1P56392 80 aa8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 Igkv4-58A0A0G2JGI6 119 aa8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 2310034G01RikA0A286YDL3 209 aa8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 Sprr1bQ62267 153 aa8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 Defb42Q8BVB5 75 aa8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 Lelp1Q9DAE3 120 aa8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 Helz2E9QAM5 2947 aaKnown RBP8.49□□□□□ -1.05
Trim23-201ENSMUST00000022225 Ighv2-2A0A075B5P8 116 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 Trav9n-4A0A075B631 113 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 P01821 116 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 P06320 134 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 Spink8Q09TK9 105 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 Trav13-2A0A075B649 110 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 C530025M09RikF6RGA8 229 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 Defb33Q30KN3 62 aa8.48□□□□□ -1.05
Trim23-201ENSMUST00000022225 Gpha2Q925Q5 128 aa8.47□□□□□ -1.05
Trim23-201ENSMUST00000022225 Ucn2Q99ML8 113 aa8.47□□□□□ -1.05
Trim23-201ENSMUST00000022225 Cspg4Q8VHY0 2327 aa8.47□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms