RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Rpgrip1Q9EPQ2 1331 aa21.46■■□□□ 1.03
Trim23-201ENSMUST00000022225 NischQ80TM9 1593 aa21.33■■□□□ 1.01
Trim23-201ENSMUST00000022225 Rtl1Q7M732 1744 aa21.12■□□□□ 0.97
Trim23-201ENSMUST00000022225 Ccdc180J3QNE4 1664 aa20.92■□□□□ 0.94
Trim23-201ENSMUST00000022225 Abcc9P70170 1546 aa20.79■□□□□ 0.92
Trim23-201ENSMUST00000022225 Acin1Q9JIX8 1338 aaKnown RBP20.74■□□□□ 0.91
Trim23-201ENSMUST00000022225 Gm35339A0A140LHH9 1649 aa20.59■□□□□ 0.89
Trim23-201ENSMUST00000022225 Rhox8Q6VSS7 320 aa20.54■□□□□ 0.88
Trim23-201ENSMUST00000022225 Pcgf6Q99NA9 353 aa20.41■□□□□ 0.86
Trim23-201ENSMUST00000022225 Zcchc6Q5BLK4 1491 aaKnown RBP20.19■□□□□ 0.82
Trim23-201ENSMUST00000022225 Dcaf1Q80TR8 1506 aa20.09■□□□□ 0.81
Trim23-201ENSMUST00000022225 Abcc8B2RUS7 1588 aa20.05■□□□□ 0.8
Trim23-201ENSMUST00000022225 Ehmt2Q9Z148 1263 aaKnown RBP20.02■□□□□ 0.8
Trim23-201ENSMUST00000022225 Trim41Q5NCC3 630 aa19.88■□□□□ 0.77
Trim23-201ENSMUST00000022225 HrcG5E8J6 738 aa19.79■□□□□ 0.76
Trim23-201ENSMUST00000022225 Supt5hO55201 1082 aaKnown RBP19.77■□□□□ 0.76
Trim23-201ENSMUST00000022225 Neurod1Q60867 357 aa19.72■□□□□ 0.75
Trim23-201ENSMUST00000022225 Las1lA2BE28 776 aaKnown RBP19.53■□□□□ 0.72
Trim23-201ENSMUST00000022225 1700123L14RikQ3V2K7 440 aa19.28■□□□□ 0.68
Trim23-201ENSMUST00000022225 Myt1Q8CFC2 1127 aa19.17■□□□□ 0.66
Trim23-201ENSMUST00000022225 Anks4bQ8K3X6 423 aa19.15■□□□□ 0.66
Trim23-201ENSMUST00000022225 CenpbP27790 599 aa19.08■□□□□ 0.64
Trim23-201ENSMUST00000022225 Csrnp3P59055 597 aa19.06■□□□□ 0.64
Trim23-201ENSMUST00000022225 Zeb1Q64318 1117 aa19.04■□□□□ 0.64
Trim23-201ENSMUST00000022225 Cngb1E1AZ71 1325 aa19.02■□□□□ 0.63
Trim23-201ENSMUST00000022225 Sall2Q9QX96 1004 aa19.01■□□□□ 0.63
Trim23-201ENSMUST00000022225 Ccdc136Q3TVA9 1136 aa18.97■□□□□ 0.63
Trim23-201ENSMUST00000022225 NefmP08553 848 aa18.96■□□□□ 0.63
Trim23-201ENSMUST00000022225 Cep164Q5DU05 1446 aa18.95■□□□□ 0.62
Trim23-201ENSMUST00000022225 Aplp2Q06335 707 aa18.9■□□□□ 0.62
Trim23-201ENSMUST00000022225 Rb1cc1Q9ESK9 1588 aa18.76■□□□□ 0.59
Trim23-201ENSMUST00000022225 Mier1Q5UAK0 511 aa18.74■□□□□ 0.59
Trim23-201ENSMUST00000022225 DiexfQ8BTT6 772 aaKnown RBP18.66■□□□□ 0.58
Trim23-201ENSMUST00000022225 Cdk11bP24788 784 aaKnown RBP18.61■□□□□ 0.57
Trim23-201ENSMUST00000022225 Baz1aO88379 1555 aa18.57■□□□□ 0.56
Trim23-201ENSMUST00000022225 Nop58Q6DFW4 536 aaKnown RBP18.53■□□□□ 0.56
Trim23-201ENSMUST00000022225 Bcl11aQ9QYE3 773 aa18.49■□□□□ 0.55
Trim23-201ENSMUST00000022225 Aebp2Q9Z248 504 aaKnown RBP18.49■□□□□ 0.55
Trim23-201ENSMUST00000022225 ClspnQ80YR7 1315 aa18.44■□□□□ 0.54
Trim23-201ENSMUST00000022225 Gm38655A0A286YDK6 273 aa18.43■□□□□ 0.54
Trim23-201ENSMUST00000022225 Wdr66E9Q743 1299 aa18.43■□□□□ 0.54
Trim23-201ENSMUST00000022225 Rsf1E9PWW9 1441 aaKnown RBP18.39■□□□□ 0.53
Trim23-201ENSMUST00000022225 Chic1Q8CBW7 227 aa18.32■□□□□ 0.52
Trim23-201ENSMUST00000022225 Gab3Q8BSM5 595 aa18.3■□□□□ 0.52
Trim23-201ENSMUST00000022225 ScribQ80U72 1612 aa18.28■□□□□ 0.52
Trim23-201ENSMUST00000022225 Smarca2Q6DIC0 1577 aa18.25■□□□□ 0.51
Trim23-201ENSMUST00000022225 Fam71e1A1L3C1 212 aa18.23■□□□□ 0.51
Trim23-201ENSMUST00000022225 Ppargc1bQ8VHJ7 1014 aa18.15■□□□□ 0.5
Trim23-201ENSMUST00000022225 Ccdc88bQ4QRL3 1481 aa18.13■□□□□ 0.49
Trim23-201ENSMUST00000022225 Kdm5dQ62240 1548 aa18.1■□□□□ 0.49
Trim23-201ENSMUST00000022225 Crybg2B7ZCC2 1516 aa18.04■□□□□ 0.48
Trim23-201ENSMUST00000022225 Hnrnpul2Q00PI9 745 aaKnown RBP18.03■□□□□ 0.48
Trim23-201ENSMUST00000022225 SafbD3YXK2 937 aaKnown RBP18.03■□□□□ 0.48
Trim23-201ENSMUST00000022225 UbtfP25976 765 aaKnown RBP18.03■□□□□ 0.48
Trim23-201ENSMUST00000022225 Mapk8ip2Q9ERE9 830 aa18.02■□□□□ 0.47
Trim23-201ENSMUST00000022225 TonslQ6NZL6 1363 aa18.02■□□□□ 0.47
Trim23-201ENSMUST00000022225 Tnnt3Q9QZ47 272 aa18.01■□□□□ 0.47
Trim23-201ENSMUST00000022225 PrkcshO08795 521 aa17.98■□□□□ 0.47
Trim23-201ENSMUST00000022225 Golga3P55937 1487 aa17.94■□□□□ 0.46
Trim23-201ENSMUST00000022225 Ifnlr1Q8CGK5 535 aa17.91■□□□□ 0.46
Trim23-201ENSMUST00000022225 Anp32aO35381 247 aa17.82■□□□□ 0.44
Trim23-201ENSMUST00000022225 Brd4Q9ESU6 1400 aaKnown RBP17.81■□□□□ 0.44
Trim23-201ENSMUST00000022225 NacadQ5SWP3 1504 aa17.81■□□□□ 0.44
Trim23-201ENSMUST00000022225 Rtl5Q5DTT4 599 aa17.78■□□□□ 0.44
Trim23-201ENSMUST00000022225 Rapgef2Q8CHG7 1496 aa17.73■□□□□ 0.43
Trim23-201ENSMUST00000022225 Ap3b1Q9Z1T1 1105 aa17.71■□□□□ 0.43
Trim23-201ENSMUST00000022225 Znf710Q3U288 666 aa17.68■□□□□ 0.42
Trim23-201ENSMUST00000022225 Ncapd3Q6ZQK0 1506 aa17.68■□□□□ 0.42
Trim23-201ENSMUST00000022225 Top2bQ64511 1612 aa17.65■□□□□ 0.42
Trim23-201ENSMUST00000022225 Synj1Q8CHC4 1574 aa17.62■□□□□ 0.41
Trim23-201ENSMUST00000022225 Nolc1E9Q5C9 702 aaKnown RBP17.62■□□□□ 0.41
Trim23-201ENSMUST00000022225 Cecr2E9Q2Z1 1453 aa17.57■□□□□ 0.4
Trim23-201ENSMUST00000022225 Rpap1Q80TE0 1409 aa17.55■□□□□ 0.4
Trim23-201ENSMUST00000022225 Pelp1Q9DBD5 1123 aaKnown RBP17.54■□□□□ 0.4
Trim23-201ENSMUST00000022225 Cep162Q6ZQ06 1403 aa17.54■□□□□ 0.4
Trim23-201ENSMUST00000022225 Stra8P70278 393 aa17.51■□□□□ 0.39
Trim23-201ENSMUST00000022225 Kdm5bQ80Y84 1544 aa17.5■□□□□ 0.39
Trim23-201ENSMUST00000022225 Amer1Q7TS75 1132 aa17.5■□□□□ 0.39
Trim23-201ENSMUST00000022225 Supt16hQ920B9 1047 aa17.5■□□□□ 0.39
Trim23-201ENSMUST00000022225 Calr4Q3TQS0 420 aa17.49■□□□□ 0.39
Trim23-201ENSMUST00000022225 Hdac5Q9Z2V6 1113 aa17.45■□□□□ 0.38
Trim23-201ENSMUST00000022225 Cc2d2aQ8CFW7 1633 aa17.44■□□□□ 0.38
Trim23-201ENSMUST00000022225 Sycp2Q9CUU3 1500 aa17.41■□□□□ 0.38
Trim23-201ENSMUST00000022225 Plekhg3Q4VAC9 1341 aa17.41■□□□□ 0.38
Trim23-201ENSMUST00000022225 Top2aQ01320 1528 aaKnown RBP17.4■□□□□ 0.38
Trim23-201ENSMUST00000022225 CftrP26361 1476 aa17.4■□□□□ 0.38
Trim23-201ENSMUST00000022225 Clip1Q922J3 1391 aa17.4■□□□□ 0.38
Trim23-201ENSMUST00000022225 Myt1lP97500 1187 aa17.39■□□□□ 0.37
Trim23-201ENSMUST00000022225 Eid3Q3V124 375 aa17.38■□□□□ 0.37
Trim23-201ENSMUST00000022225 Esf1Q3V1V3 845 aaKnown RBP17.35■□□□□ 0.37
Trim23-201ENSMUST00000022225 Eif4g1Q6NZJ6 1600 aaKnown RBP17.34■□□□□ 0.37
Trim23-201ENSMUST00000022225 Washc2Q6PGL7 1334 aa17.32■□□□□ 0.36
Trim23-201ENSMUST00000022225 Fmn1Q05860 1466 aa17.29■□□□□ 0.36
Trim23-201ENSMUST00000022225 Upf2A2AT37 1269 aaKnown RBP17.27■□□□□ 0.35
Trim23-201ENSMUST00000022225 Cttnbp2B9EJA2 1648 aa17.24■□□□□ 0.35
Trim23-201ENSMUST00000022225 Ppp4r2Q0VGB7 417 aa17.24■□□□□ 0.35
Trim23-201ENSMUST00000022225 Wdr43Q6ZQL4 677 aaKnown RBP17.24■□□□□ 0.35
Trim23-201ENSMUST00000022225 TchhA0A0B4J1F9 1599 aa17.23■□□□□ 0.35
Trim23-201ENSMUST00000022225 Ccdc27Q3V036 639 aa17.2■□□□□ 0.34
Trim23-201ENSMUST00000022225 Baz1bQ9Z277 1479 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms