RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 A830031A19RikQ8BNT5 113 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Nbeal2Q6ZQA0 2742 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Lst1O08843 95 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Defb29Q8BGW9 78 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Leap2Q91V13 76 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 P06328 117 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Reg3gO09049 174 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Rpl18aP62717 176 aaKnown RBP6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Serp2Q6TAW2 65 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 NipblQ6KCD5 2798 aaKnown RBP6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Igkv4-57-1A0A075B5M4 119 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Sh2d1aO88890 126 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Fam19a5Q91WE9 132 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Ubl5Q9EPV8 73 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Pfn2Q9JJV2 140 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Esm1Q9QYY7 184 aa6.55□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Vpreb1P13372 142 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Gm26566Q8CAC1 153 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Ly6hQ9WUC3 139 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Rnase1P00683 149 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 P01820 115 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Spink1P09036 80 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 A130051J06RikQ8CAU1 227 aa6.54□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Gm9767G3X930 207 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 P01750 117 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 4930518I15RikQ3V2W7 57 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Ighv1-82A0A0G2JEU7 117 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Trav13n-1A0A0G2JEU8 110 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Gm19935A0A1B0GSF9 52 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Sprr3O09116 238 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 TeppQ6IMH0 216 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 CdsnQ7TPC1 561 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Ighv1-75A0A075B5Y2 117 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Igkv4-62A0A0G2JDW9 117 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 5730596B20RikQ8BQ08 205 aa6.53□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Igkv4-57A0A0A6YYE7 117 aa6.52□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Lage3Q9CR70 148 aa6.52□□□□□ -1.36
Col28a1-201ENSMUST00000115537 DmdP11531 3678 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Trbv16A0A0B4J1H3 115 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Eif4ebp1Q60876 117 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ndufa12Q7TMF3 145 aaKnown RBP6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 1700010B08RikQ9DAI7 102 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Gm9195A0A140LHT4 2805 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Myo15aQ9QZZ4 3511 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-50A0A075B5W1 117 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Igkv4-70A0A0B4J1I5 116 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Igkv1-35A0A0G2JDE5 120 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Rps28P62858 69 aaKnown RBP6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Cmc4Q61908 68 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 ScxQ64124 207 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Timm17bQ9Z0V7 172 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-64A0A075B5X3 117 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Trav9d-4A0A0G2JG37 103 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ang3P97802 145 aa6.52□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Pkd1l1Q8R526 2615 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv8-11A0A075B5X4 119 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Gm10337F7DEP7 55 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Tmem254aP0DN89 123 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Tmem254bP0DN90 123 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Tmem254cP0DN91 123 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Defb10Q8R2I8 73 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-85A0A075B5Y6 117 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-5A0A0A6YWG2 117 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 1700056E22RikF7CNM6 234 aa6.51□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ndufs7Q9DC70 224 aa6.5□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Gm17472A0A075B683 117 aa6.5□□□□□ -1.37
Col28a1-201ENSMUST00000115537 BikO70337 150 aa6.5□□□□□ -1.37
Col28a1-201ENSMUST00000115537 P01729 129 aa6.5□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Acyp1P56376 99 aa6.5□□□□□ -1.37
Col28a1-201ENSMUST00000115537 BC025920Q3US60 128 aa6.5□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Igkv4-59A0A0B4J1I8 117 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 9530053A07RikE9PVG8 2581 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-66A0A075B5X5 117 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Trav9-2A0A075B647 113 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Trav9-4A0A0B4J1K2 113 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ovol3D3YYM0 189 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Lamtor3O88653 124 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Spink8Q09TK9 105 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Gphb5Q812B2 130 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Q9CX25 107 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Rpl36aP83882 106 aaKnown RBP6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Klk11Q9QYN3 276 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Pla2g2dQ9WVF6 144 aa6.49□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Utp20Q5XG71 2788 aaKnown RBP6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Igfn1Q3KNY0 2849 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 RelnQ60841 3461 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv3-3A0A0A6YWL2 116 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv2-6-8A0A0A6YWY9 116 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Gm7257D3YX25 99 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 SmcpP15265 143 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-12A0A0A6YXJ9 117 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 AI854703Q8BIN3 203 aa6.48□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ighv1-49A0A0A6YWX2 117 aa6.47□□□□□ -1.37
Col28a1-201ENSMUST00000115537 P01753 117 aa6.47□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Cd164l2Q9D6W7 172 aa6.47□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ucn2Q99ML8 113 aa6.47□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Pglyrp1O88593 182 aa6.47□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Gm9922Q8C3P1 144 aa6.47□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Ly6gP35461 111 aa6.46□□□□□ -1.37
Col28a1-201ENSMUST00000115537 Tcte2E9PY37 120 aa6.46□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms