RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 9530053A07RikE9PVG8 2581 aa5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 Igkv14-126A0A075B5K0 117 aa5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 Fam19a1Q7TPG8 133 aa5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 Tet1Q3URK3 2007 aaKnown RBP5.4□□□□□ -1.55
Chm-202ENSMUST00000113388 Trav13-2A0A075B649 110 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm10197F6QEY5 67 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Tmem14cQ9CQN6 114 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Ankrd17Q99NH0 2603 aaKnown RBP5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Trav9n-4A0A075B631 113 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Ighv1-49A0A0A6YWX2 117 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Rpl39P62892 51 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Higd1cQ76I25 96 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Cd52Q64389 74 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Ang2Q64438 145 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Usf3B2RUQ2 2221 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Igkv4-81A0A0G2JEY5 119 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm10570F6VB42 170 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm5464Q3UY29 175 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Q4KKZ1 196 aa5.39□□□□□ -1.55
Chm-202ENSMUST00000113388 Abca1P41233 2261 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Ccl19O70460 108 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Igkv4-62A0A0G2JDW9 117 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Tmem263Q9DAM7 115 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Ighv1-75A0A075B5Y2 117 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 P06320 134 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Mrps21P58059 87 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Eif4ebp1Q60876 117 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 AI854703Q8BIN3 203 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Rnf185Q91YT2 192 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Tmem167aQ9CR64 72 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Cd164l2Q9D6W7 172 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 P01820 115 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Dpm3Q9D1Q4 92 aa5.38□□□□□ -1.55
Chm-202ENSMUST00000113388 Pgpep1lQ9CWB5 130 aa5.37□□□□□ -1.55
Chm-202ENSMUST00000113388 Esm1Q9QYY7 184 aa5.37□□□□□ -1.55
Chm-202ENSMUST00000113388 Fhl3Q9R059 289 aa5.37□□□□□ -1.55
Chm-202ENSMUST00000113388 Ly6hQ9WUC3 139 aa5.37□□□□□ -1.55
Chm-202ENSMUST00000113388 AtrQ9JKK8 2635 aa5.37□□□□□ -1.55
Chm-202ENSMUST00000113388 Trdv5A0A075B661 115 aa5.37□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm17472A0A075B683 117 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 P04941 107 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm26566Q8CAC1 153 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Setd2E9Q5F9 2537 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Prop1P97458 223 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 A730015C16RikQ8C992 119 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Fam216bQ8CC14 138 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Igfn1Q3KNY0 2849 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Igkv14-111A0A140T8P9 117 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Lelp1Q9DAE3 120 aa5.36□□□□□ -1.55
Chm-202ENSMUST00000113388 Trbv13-1A0A0B4J1P8 112 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Trav9d-4A0A0G2JG37 103 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Rpl28P41105 137 aaKnown RBP5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Trav13-4-dv7A0A075B6C2 110 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Trav13d-4A0A0G2JFX3 110 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 IappP12968 93 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm10300Q8C8P7 189 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Tenm4Q3UHK6 2771 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm21748Q3UE70 102 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 1700010B08RikQ9DAI7 102 aa5.35□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm9922Q8C3P1 144 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Ube2e2Q91W82 201 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Ighv1-66A0A075B5X5 117 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Igkv13-84A0A140T8N3 115 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Trbv13-2A0A140T8N6 113 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Crip1P63254 77 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Fhl4Q8CDC8 279 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Q9DAB9 146 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Zfp462B1AWL2 2495 aaKnown RBP5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Gm17521F6QAC8 156 aa5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Prr3Q811B5 190 aaKnown RBP5.34□□□□□ -1.55
Chm-202ENSMUST00000113388 Ighv1-63A0A075B5X2 117 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Trav13d-1A0A075B606 110 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Ighv3-4A0A0A6YXF1 117 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 B230217C12RikE9Q3Z1 139 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv2-109A0A075B5K6 120 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv4-70A0A0B4J1I5 116 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Ncoa6Q9JL19 2067 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Ighv2-5A0A0A6YY69 116 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Rnase2aQ8K196 155 aa5.33□□□□□ -1.56
Chm-202ENSMUST00000113388 Ighv1-50A0A075B5W1 117 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Ighv5-8A0A075B676 92 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm10643Q3URG9 111 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm15217A2CG07 155 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Fam19a4Q7TPG5 135 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Q9CX25 107 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Erdr1J3QMM0 206 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Prrc2aQ7TSC1 2158 aaKnown RBP5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv4-58A0A0G2JGI6 119 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Ndufa4l2Q4FZG9 87 aa5.32□□□□□ -1.56
Chm-202ENSMUST00000113388 Trav13n-1A0A0G2JEU8 110 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Sfta2E9PXB6 77 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 1700056E22RikF7CNM6 234 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 P84751 237 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Trav13n-2A0A0G2JF93 110 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 P01747 120 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Usp9yF8VPU6 2556 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Nsd1O88491 2588 aaKnown RBP5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Wisp2Q9Z0G4 251 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Ighv1-55A0A075B5W6 117 aa5.31□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm10837Q3UTT8 145 aa5.31□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms