RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Ly6c2P0CW03 131 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 AspmQ8CJ27 3122 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Dido1Q8C9B9 2256 aaKnown RBP6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Glrp1E9Q9S8 174 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Camk2n2Q78WH7 79 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Lst1O08843 95 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Ighv1-61P01749 117 aa6.18□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Ighv8-5A0A0A6YY60 119 aa6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Ociad2Q9D8W7 154 aa6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Timm17bQ9Z0V7 172 aa6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 MifP34884 115 aaKnown RBP6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Rpl18aP62717 176 aaKnown RBP6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Gm3618D3Z4P5 127 aa6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Gm26661M0QWV4 156 aa6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Tmem223Q9CQE2 199 aaKnown RBP6.17□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Ptpn13Q64512 2453 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Zfyve26Q5DU37 2529 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Gm10518F6UQQ9 182 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Gm20730A0A075B5J6 119 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Vps13aQ5H8C4 3166 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 PrlhG3UWC3 86 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Ly6gP35461 111 aa6.16□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Rbmy1bQ60990 380 aa6.15□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Hrct1Q9D6B9 109 aa6.15□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 Prh1P05142 261 aa6.15□□□□□ -1.42
Sf3b1-201ENSMUST00000027127 U90926O08546 118 aa6.15□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Gm37389A0A0A6YW05 95 aa6.15□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Mrpl52Q9D0Y8 121 aa6.15□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Qrich2A0A140LIY9 2337 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Igkv3-4A0A140T8Q4 119 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Gm9767G3X930 207 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ube2d3P61079 147 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ube2d2P62838 147 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Rbx1P62878 108 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Cd164l2Q9D6W7 172 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Sorl1O88307 2215 aaKnown RBP6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Reg3bP35230 175 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Prrc2aQ7TSC1 2158 aaKnown RBP6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ube2d1P61080 147 aaKnown RBP6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Igkv3-3A0A140T8Q0 119 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Vpreb3D3Z6J4 130 aa6.14□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ccdc179J3QM76 67 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 SrarpQ3ULG3 163 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 SbsponQ3UPR9 264 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Naa38Q9D2U5 125 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Crip2Q9DCT8 208 aaKnown RBP6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Igkv1-88A0A140T8N1 120 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Gm20726G3UX18 150 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Gm17577J3QNF7 156 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ighv8-12A0A0G2JDE1 119 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Igkv8-21A0A140T8P7 120 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Acyp1P56376 99 aa6.13□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Trav13d-1A0A075B606 110 aa6.12□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ighv1-72P01751 139 aa6.12□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Cfc1P97766 202 aa6.12□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 9530003J23RikQ8BM26 151 aa6.12□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Gm10542F6XDR3 90 aa6.12□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Trav13d-4A0A0G2JFX3 110 aa6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Smim20D3Z7Q2 69 aa6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Higd2aQ9CQJ1 106 aa6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 CrygdP04342 174 aa6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Defb47Q30KN1 79 aa6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 3110070M22RikQ9DAQ7 118 aa6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 MgaA2AWL7 3003 aaKnown RBP6.11□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Defb45Q3V490 66 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Dmxl1Q6PNC0 3013 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Wdfy3Q6VNB8 3508 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Spink4O35679 86 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Shisa2Q8QZV2 295 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Klk5Q9D140 293 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Cdc42se2Q8BGH7 84 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 FrylF8VQ05 3007 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Pde6gP09174 87 aa6.1□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ighv1-62-1A0A075B5U3 116 aa6.09□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Trav13-2A0A075B649 110 aa6.09□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Trav13n-1A0A0G2JEU8 110 aa6.09□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Gm10647E9Q8X0 124 aa6.09□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 AngP21570 145 aa6.09□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 Ighv1-59A0A0A6YXE0 117 aa6.09□□□□□ -1.43
Sf3b1-201ENSMUST00000027127 BC067074F6RXI4 2391 aa6.09□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 P01823 113 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Defb13Q8R2I4 64 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Bod1lE9Q6J5 3032 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Map1aQ9QYR6 2776 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Trav9n-4A0A075B631 113 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Trav11A0A0B4J1J9 114 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Smrp1Q2MH31 260 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Brk1Q91VR8 75 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Tcl1b3P56842 122 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm10577Q3UDV9 132 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Jbts17Q8CE72 3214 aa6.08□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm10401E9Q3K6 71 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Vpreb2P13373 142 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Fam19a1Q7TPG8 133 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Spry2Q9QXV8 315 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Gm4707V9GXN5 68 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Frem2Q6NVD0 3160 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Usp9xP70398 2559 aaKnown RBP6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 Ormdl1Q921I0 153 aa6.07□□□□□ -1.44
Sf3b1-201ENSMUST00000027127 CrygfQ9CXV3 174 aa6.07□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms