RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Gm10767Q3TQP0 103 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 H1fxQ80ZM5 188 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Nhlrc1Q8BR37 401 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 HampQ9EQ21 83 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Abca12E9Q876 2595 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Klk1b4P00757 256 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Ube2wQ8VDW4 151 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Gm21748Q3UE70 102 aa6.08□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Ighv2-6-8A0A0A6YWY9 116 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Trav9n-2A0A0G2JDP3 113 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Rpl36aP83882 106 aaKnown RBP6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 4930564D02RikQ9D4S4 103 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Trav13d-1A0A075B606 110 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Glrp1E9Q9S8 174 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Rnf183Q8QZS5 190 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 4930544G11RikQ9CR99 193 aa6.07□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Ighv1-11A0A0A6YWI9 117 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Gm10490F6VBM2 120 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 MrapQ9D159 127 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Q9DAQ5 155 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Smim10l1A0A087WNQ7 89 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Spink1P09036 80 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Bri3P28662 125 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Wfdc15aQ8BH89 80 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Tmem101Q91VP7 257 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Sec61gP60060 68 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Bahcc1Q3UHR0 2643 aa6.06□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Gm7075D3Z497 112 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Fhl2O70433 279 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Psmb8P28063 276 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Defb18Q30KP5 85 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 SpinklQ8CEK3 90 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Krtap26-1Q9D7N2 215 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Trav4d-3A0A075B625 110 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Krtap27-1E9PX37 202 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 4930470P17RikQ9D542 155 aa6.05□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Fgfbp3Q1HCM0 245 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Kmt2bO08550 2713 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Trav7-6A0A075B640 112 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Trav4-3A0A0B4J1K1 110 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Rnf152Q8BG47 203 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Cdip1Q9DB75 208 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 NpwA0A1L1STR8 176 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Rbmy1bQ60990 380 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Zc2hc1bQ9D534 172 aa6.04□□□□□ -1.44
Bdnf-208ENSMUST00000111049 A930009A15RikG3UYI6 118 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 BC048562Q80ZQ7 204 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Gcn1E9PVA8 2671 aaKnown RBP6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Hivep2Q3UHF7 2430 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Gm10509O88255 85 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Gata1P17679 413 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Ang3P97802 145 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Q99M08 65 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Ucn2Q99ML8 113 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Rif1Q6PR54 2419 aaKnown RBP6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 B230217C12RikE9Q3Z1 139 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 P06329 120 aa6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 Smg1Q8BKX6 3658 aaKnown RBP6.03□□□□□ -1.44
Bdnf-208ENSMUST00000111049 NbeaQ9EPN1 2936 aa6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Myo9aQ8C170 2542 aa6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Gm867A0A1W2P7T4 151 aa6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Crip2Q9DCT8 208 aaKnown RBP6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Znf740Q6NZQ6 180 aa6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Q8R092 253 aa6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Cyyr1Q8VIH7 165 aa6.02□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Gm10135F6TEE5 83 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Atp5g3P56384 141 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Gm9913Q8BQQ2 135 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Ankrd11E9Q4F7 2643 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 2310009B15RikA0A0A6YWI4 143 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Gm10542F6XDR3 90 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 P84751 237 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 3110070M22RikQ9DAQ7 118 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Timm17bQ9Z0V7 172 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Lama5Q61001 3718 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Ighv1-49A0A0A6YWX2 117 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Trav13n-1A0A0G2JEU8 110 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 RetnQ99P87 114 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 1700010B08RikQ9DAI7 102 aa6.01□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Krtap4-2B1AQ85 167 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Smim20D3Z7Q2 69 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Gm10322F7D7I4 111 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Mapk1ip1lQ8BH93 242 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Defa1P11477 93 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Eif4ebp1Q60876 117 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Igkv4-68A0A0B4J1I7 117 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Dnal4Q9DCM4 105 aa6□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Nbeal1E9PYP2 2688 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Igkv4-78A0A0A6YYE5 119 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Tmem213Q08EA8 116 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Ccdc179J3QM76 67 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Nop10Q9CQS2 64 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Lst1O08843 95 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Rpl35aO55142 110 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Ighv1-72P01751 139 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Morn3Q8C5T4 241 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Ndufa3Q9CQ91 84 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Gm9195A0A140LHT4 2805 aa5.99□□□□□ -1.45
Bdnf-208ENSMUST00000111049 Trav9d-4A0A0G2JG37 103 aa5.98□□□□□ -1.45
Bdnf-208ENSMUST00000111049 SelenowP63300 88 aa5.98□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms