RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 NischQ80TM9 1593 aa14.91□□□□□ -0.02
Bdnf-208ENSMUST00000111049 Rhox8Q6VSS7 320 aa14.62□□□□□ -0.07
Bdnf-208ENSMUST00000111049 Abcc9P70170 1546 aa14.36□□□□□ -0.11
Bdnf-208ENSMUST00000111049 Gm35339A0A140LHH9 1649 aa14.2□□□□□ -0.14
Bdnf-208ENSMUST00000111049 Abcc8B2RUS7 1588 aa13.99□□□□□ -0.17
Bdnf-208ENSMUST00000111049 Rtl1Q7M732 1744 aa13.95□□□□□ -0.18
Bdnf-208ENSMUST00000111049 Ccdc180J3QNE4 1664 aa13.83□□□□□ -0.2
Bdnf-208ENSMUST00000111049 Rpgrip1Q9EPQ2 1331 aa13.77□□□□□ -0.2
Bdnf-208ENSMUST00000111049 Ccdc136Q3TVA9 1136 aa13.42□□□□□ -0.26
Bdnf-208ENSMUST00000111049 Ehmt2Q9Z148 1263 aaKnown RBP13.41□□□□□ -0.26
Bdnf-208ENSMUST00000111049 Acin1Q9JIX8 1338 aaKnown RBP13.35□□□□□ -0.27
Bdnf-208ENSMUST00000111049 HrcG5E8J6 738 aa13.32□□□□□ -0.28
Bdnf-208ENSMUST00000111049 Zcchc6Q5BLK4 1491 aaKnown RBP13.25□□□□□ -0.29
Bdnf-208ENSMUST00000111049 Trim41Q5NCC3 630 aa13.18□□□□□ -0.3
Bdnf-208ENSMUST00000111049 Rb1cc1Q9ESK9 1588 aa13.08□□□□□ -0.32
Bdnf-208ENSMUST00000111049 Dcaf1Q80TR8 1506 aa13.05□□□□□ -0.32
Bdnf-208ENSMUST00000111049 Mapk8ip2Q9ERE9 830 aa13.04□□□□□ -0.32
Bdnf-208ENSMUST00000111049 Baz1aO88379 1555 aa12.9□□□□□ -0.34
Bdnf-208ENSMUST00000111049 Pcgf6Q99NA9 353 aa12.9□□□□□ -0.34
Bdnf-208ENSMUST00000111049 Cngb1E1AZ71 1325 aa12.9□□□□□ -0.34
Bdnf-208ENSMUST00000111049 Gab3Q8BSM5 595 aa12.84□□□□□ -0.35
Bdnf-208ENSMUST00000111049 ScribQ80U72 1612 aa12.83□□□□□ -0.36
Bdnf-208ENSMUST00000111049 Kdm5dQ62240 1548 aa12.79□□□□□ -0.36
Bdnf-208ENSMUST00000111049 Cep164Q5DU05 1446 aa12.77□□□□□ -0.36
Bdnf-208ENSMUST00000111049 NacadQ5SWP3 1504 aa12.75□□□□□ -0.37
Bdnf-208ENSMUST00000111049 Esf1Q3V1V3 845 aaKnown RBP12.69□□□□□ -0.38
Bdnf-208ENSMUST00000111049 Zeb1Q64318 1117 aa12.69□□□□□ -0.38
Bdnf-208ENSMUST00000111049 Supt5hO55201 1082 aaKnown RBP12.66□□□□□ -0.38
Bdnf-208ENSMUST00000111049 NefmP08553 848 aa12.64□□□□□ -0.39
Bdnf-208ENSMUST00000111049 Chic1Q8CBW7 227 aa12.59□□□□□ -0.39
Bdnf-208ENSMUST00000111049 Crybg2B7ZCC2 1516 aa12.56□□□□□ -0.4
Bdnf-208ENSMUST00000111049 Brd4Q9ESU6 1400 aaKnown RBP12.55□□□□□ -0.4
Bdnf-208ENSMUST00000111049 Smarca2Q6DIC0 1577 aa12.54□□□□□ -0.4
Bdnf-208ENSMUST00000111049 Mier1Q5UAK0 511 aa12.49□□□□□ -0.41
Bdnf-208ENSMUST00000111049 Rsf1E9PWW9 1441 aaKnown RBP12.48□□□□□ -0.41
Bdnf-208ENSMUST00000111049 Las1lA2BE28 776 aaKnown RBP12.47□□□□□ -0.41
Bdnf-208ENSMUST00000111049 Wdr66E9Q743 1299 aa12.44□□□□□ -0.42
Bdnf-208ENSMUST00000111049 UbtfP25976 765 aaKnown RBP12.43□□□□□ -0.42
Bdnf-208ENSMUST00000111049 Golga3P55937 1487 aa12.41□□□□□ -0.42
Bdnf-208ENSMUST00000111049 Sycp2Q9CUU3 1500 aa12.39□□□□□ -0.43
Bdnf-208ENSMUST00000111049 Myt1lP97500 1187 aa12.39□□□□□ -0.43
Bdnf-208ENSMUST00000111049 Ccdc88bQ4QRL3 1481 aa12.35□□□□□ -0.43
Bdnf-208ENSMUST00000111049 Neurod1Q60867 357 aa12.35□□□□□ -0.43
Bdnf-208ENSMUST00000111049 Npm2Q80W85 207 aa12.35□□□□□ -0.43
Bdnf-208ENSMUST00000111049 Sall2Q9QX96 1004 aa12.29□□□□□ -0.44
Bdnf-208ENSMUST00000111049 Cecr2E9Q2Z1 1453 aa12.28□□□□□ -0.44
Bdnf-208ENSMUST00000111049 Synj1Q8CHC4 1574 aa12.21□□□□□ -0.45
Bdnf-208ENSMUST00000111049 CftrP26361 1476 aa12.17□□□□□ -0.46
Bdnf-208ENSMUST00000111049 Cdk11bP24788 784 aaKnown RBP12.17□□□□□ -0.46
Bdnf-208ENSMUST00000111049 Nop58Q6DFW4 536 aaKnown RBP12.14□□□□□ -0.47
Bdnf-208ENSMUST00000111049 TonslQ6NZL6 1363 aa12.13□□□□□ -0.47
Bdnf-208ENSMUST00000111049 ClspnQ80YR7 1315 aa12.12□□□□□ -0.47
Bdnf-208ENSMUST00000111049 Anks4bQ8K3X6 423 aa12.1□□□□□ -0.47
Bdnf-208ENSMUST00000111049 Ppargc1bQ8VHJ7 1014 aa12.1□□□□□ -0.47
Bdnf-208ENSMUST00000111049 Plekhg3Q4VAC9 1341 aa12.08□□□□□ -0.48
Bdnf-208ENSMUST00000111049 Clip1Q922J3 1391 aa12.06□□□□□ -0.48
Bdnf-208ENSMUST00000111049 Aebp2Q9Z248 504 aaKnown RBP12.06□□□□□ -0.48
Bdnf-208ENSMUST00000111049 Cttnbp2B9EJA2 1648 aa12.03□□□□□ -0.48
Bdnf-208ENSMUST00000111049 Fmn1Q05860 1466 aa12.03□□□□□ -0.48
Bdnf-208ENSMUST00000111049 Il27Q8K3I6 234 aa12.01□□□□□ -0.49
Bdnf-208ENSMUST00000111049 Cep162Q6ZQ06 1403 aa12.01□□□□□ -0.49
Bdnf-208ENSMUST00000111049 Rapgef2Q8CHG7 1496 aa12□□□□□ -0.49
Bdnf-208ENSMUST00000111049 CenpbP27790 599 aa11.99□□□□□ -0.49
Bdnf-208ENSMUST00000111049 Csrnp3P59055 597 aa11.98□□□□□ -0.49
Bdnf-208ENSMUST00000111049 Top2bQ64511 1612 aa11.98□□□□□ -0.49
Bdnf-208ENSMUST00000111049 Ap3b1Q9Z1T1 1105 aa11.98□□□□□ -0.49
Bdnf-208ENSMUST00000111049 BicraF8VPZ9 1578 aa11.97□□□□□ -0.49
Bdnf-208ENSMUST00000111049 Smarca4Q3TKT4 1613 aaKnown RBP11.95□□□□□ -0.5
Bdnf-208ENSMUST00000111049 Cc2d2aQ8CFW7 1633 aa11.94□□□□□ -0.5
Bdnf-208ENSMUST00000111049 DiexfQ8BTT6 772 aaKnown RBP11.92□□□□□ -0.5
Bdnf-208ENSMUST00000111049 1700123L14RikQ3V2K7 440 aa11.9□□□□□ -0.5
Bdnf-208ENSMUST00000111049 Top2aQ01320 1528 aaKnown RBP11.88□□□□□ -0.51
Bdnf-208ENSMUST00000111049 Eid3Q3V124 375 aa11.87□□□□□ -0.51
Bdnf-208ENSMUST00000111049 Aplp2Q06335 707 aa11.85□□□□□ -0.51
Bdnf-208ENSMUST00000111049 Fam50aQ9WV03 339 aaKnown RBP11.84□□□□□ -0.51
Bdnf-208ENSMUST00000111049 Eea1Q8BL66 1411 aa11.83□□□□□ -0.52
Bdnf-208ENSMUST00000111049 Ube2uB1AUC4 352 aa11.81□□□□□ -0.52
Bdnf-208ENSMUST00000111049 Tnnt3Q9QZ47 272 aa11.81□□□□□ -0.52
Bdnf-208ENSMUST00000111049 Setd5Q5XJV7 1441 aa11.81□□□□□ -0.52
Bdnf-208ENSMUST00000111049 NclP09405 707 aaKnown RBP11.8□□□□□ -0.52
Bdnf-208ENSMUST00000111049 Stra8P70278 393 aa11.8□□□□□ -0.52
Bdnf-208ENSMUST00000111049 Iqgap2Q3UQ44 1575 aa11.77□□□□□ -0.53
Bdnf-208ENSMUST00000111049 Myt1Q8CFC2 1127 aa11.77□□□□□ -0.53
Bdnf-208ENSMUST00000111049 Lmod2Q3UHZ5 550 aa11.74□□□□□ -0.53
Bdnf-208ENSMUST00000111049 Atad2bE9Q166 1460 aaKnown RBP11.73□□□□□ -0.53
Bdnf-208ENSMUST00000111049 Gm38655A0A286YDK6 273 aa11.73□□□□□ -0.53
Bdnf-208ENSMUST00000111049 BlmO88700 1416 aa11.73□□□□□ -0.53
Bdnf-208ENSMUST00000111049 Kif15Q6P9L6 1387 aa11.73□□□□□ -0.53
Bdnf-208ENSMUST00000111049 Pds5bQ4VA53 1446 aaKnown RBP11.71□□□□□ -0.54
Bdnf-208ENSMUST00000111049 Ncapd3Q6ZQK0 1506 aa11.69□□□□□ -0.54
Bdnf-208ENSMUST00000111049 Ccdc18Q640L5 1455 aa11.68□□□□□ -0.54
Bdnf-208ENSMUST00000111049 Npm1Q61937 292 aaKnown RBP11.66□□□□□ -0.54
Bdnf-208ENSMUST00000111049 Ttbk1Q6PCN3 1308 aa11.66□□□□□ -0.54
Bdnf-208ENSMUST00000111049 Arhgap35Q91YM2 1499 aa11.66□□□□□ -0.54
Bdnf-208ENSMUST00000111049 Ccer2J3QPU5 274 aa11.64□□□□□ -0.55
Bdnf-208ENSMUST00000111049 Slc24a1Q91WD8 1130 aa11.62□□□□□ -0.55
Bdnf-208ENSMUST00000111049 Arap1Q4LDD4 1452 aa11.61□□□□□ -0.55
Bdnf-208ENSMUST00000111049 Baz1bQ9Z277 1479 aa11.61□□□□□ -0.55
Bdnf-208ENSMUST00000111049 PtprkP35822 1457 aa11.59□□□□□ -0.55
Bdnf-208ENSMUST00000111049 Ercc6F8VPZ5 1481 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms