RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gm17359A0A0G2JEB7 487 aa12.15□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Serp2Q6TAW2 65 aa12.14□□□□□ -0.47
Ubr3-201ENSMUST00000055758 5730596B20RikQ8BQ08 205 aa12.14□□□□□ -0.47
Ubr3-201ENSMUST00000055758 P01753 117 aa12.14□□□□□ -0.47
Ubr3-201ENSMUST00000055758 OtoglF7A4A7 2325 aa12.14□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Fam19a4Q7TPG5 135 aa12.14□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Ighv1-82A0A0G2JEU7 117 aa12.13□□□□□ -0.47
Ubr3-201ENSMUST00000055758 BC107364E9Q5A2 140 aa12.13□□□□□ -0.47
Ubr3-201ENSMUST00000055758 P01750 117 aa12.13□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Gm10542F6XDR3 90 aa12.13□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Edn3P48299 214 aa12.13□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Fam110aQ8R184 296 aa12.12□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Gm44965A0A0N4SVR3 59 aa12.12□□□□□ -0.47
Ubr3-201ENSMUST00000055758 1500011B03RikQ3TTH7 73 aa12.11□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Nav2E9Q842 2432 aa12.11□□□□□ -0.47
Ubr3-201ENSMUST00000055758 TeppQ6IMH0 216 aa12.11□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Trbv16A0A0B4J1H3 115 aa12.11□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Odf1Q61999 247 aa12.11□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Ighv1-12A0A0A6YXJ9 117 aa12.11□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Ighv5-8A0A075B676 92 aa12.1□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Gm9970F6ZED4 185 aa12.1□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Sh2d1aO88890 126 aa12.1□□□□□ -0.47
Ubr3-201ENSMUST00000055758 BlcapP62951 87 aa12.1□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Gm17324Q8C6J8 137 aa12.1□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Apoc4Q61268 124 aa12.1□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Gp9O88186 177 aa12.09□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Q9DAQ5 155 aa12.09□□□□□ -0.47
Ubr3-201ENSMUST00000055758 Wfdc6bF6ULY1 148 aa12.08□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Myo9aQ8C170 2542 aa12.08□□□□□ -0.48
Ubr3-201ENSMUST00000055758 P04945 108 aa12.08□□□□□ -0.48
Ubr3-201ENSMUST00000055758 LoxP28301 411 aa12.08□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Wfdc15bQ9JHY4 80 aa12.08□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Col24a1Q30D77 1733 aa12.07□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Ighv1-52A0A0A6YXC3 117 aa12.07□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Gm21994F6T2D2 329 aa12.07□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Gm10401E9Q3K6 71 aa12.07□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Plac8l1Q08EJ0 177 aa12.07□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Ccl24Q9JKC0 119 aa12.07□□□□□ -0.48
Ubr3-201ENSMUST00000055758 UrahQ9CRB3 118 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Triap1Q9D8Z2 76 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 P0C913 63 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 1700010B08RikQ9DAI7 102 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 1520401A03RikA0A0J9YVH6 598 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Erdr1J3QMM0 206 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Ighv10-1A0A0B4J1J6 119 aa12.06□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Higd2aQ9CQJ1 106 aa12.05□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Defb40Q70KL2 73 aa12.05□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Cfc1P97766 202 aa12.05□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Q99M08 65 aa12.04□□□□□ -0.48
Ubr3-201ENSMUST00000055758 P04940 107 aa12.03□□□□□ -0.48
Ubr3-201ENSMUST00000055758 P04941 107 aa12.03□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Rnf138Q9CQE0 245 aaKnown RBP12.03□□□□□ -0.48
Ubr3-201ENSMUST00000055758 4930535I16RikQ9CUI2 172 aa12.03□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Klk5Q9D140 293 aa12.03□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Gm9949Q8C9F4 104 aa12.03□□□□□ -0.48
Ubr3-201ENSMUST00000055758 Ufsp1Q9CZP0 217 aa12.02□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Crip1P63254 77 aa12.01□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Wfdc3Q14AE4 130 aa12.01□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Dkk4Q8VEJ3 221 aa12.01□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Dmbt1Q60997 2085 aa12.01□□□□□ -0.49
Ubr3-201ENSMUST00000055758 BaalcQ8VHV1 145 aa12.01□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Gm8439G3UWA7 96 aa12□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Gm1968Q3T9I3 115 aa12□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Wdr38Q9D994 303 aa12□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Ighv8-5A0A0A6YY60 119 aa12□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Gm14137Q8CE97 175 aa11.99□□□□□ -0.49
Ubr3-201ENSMUST00000055758 PpdpfQ9CR37 115 aa11.99□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Q9D131 166 aa11.99□□□□□ -0.49
Ubr3-201ENSMUST00000055758 PscaP57096 123 aa11.99□□□□□ -0.49
Ubr3-201ENSMUST00000055758 ScxQ64124 207 aa11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Ube2d4D3YUH6 135 aa11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Igf2rQ07113 2483 aaKnown RBP11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Ighv1-63A0A075B5X2 117 aa11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 3110082J24RikF6Z6Z2 108 aa11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 P04942 107 aa11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Tmem223Q9CQE2 199 aaKnown RBP11.98□□□□□ -0.49
Ubr3-201ENSMUST00000055758 9230109A22RikQ8BHE6 111 aa11.97□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Gm37988J3QM41 62 aa11.97□□□□□ -0.49
Ubr3-201ENSMUST00000055758 IgipA0A1B0GR74 53 aa11.97□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Fhl1P97447 280 aaKnown RBP11.97□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Defb38Q7TNV7 63 aa11.97□□□□□ -0.49
Ubr3-201ENSMUST00000055758 A830005F24RikQ8BRT5 167 aa11.97□□□□□ -0.49
Ubr3-201ENSMUST00000055758 1810032O08RikE9PZV8 113 aa11.96□□□□□ -0.49
Ubr3-201ENSMUST00000055758 Ighv1-53A0A075B5W3 117 aa11.96□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P01748 117 aa11.96□□□□□ -0.5
Ubr3-201ENSMUST00000055758 AW146154Q3TPQ7 468 aa11.96□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm9805F6YK59 57 aa11.96□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ube2d3P61079 147 aa11.95□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm10267M0QWD8 85 aa11.95□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P84751 237 aa11.95□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ighv2-7A0A075B5Q8 116 aa11.95□□□□□ -0.5
Ubr3-201ENSMUST00000055758 U90926O08546 118 aa11.95□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm15217A2CG07 155 aa11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ramp1Q9WTJ5 148 aa11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Gm12057A0A087WR21 115 aa11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Ube2d1P61080 147 aaKnown RBP11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 Rnase1P00683 149 aa11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 9430015G10RikA2ASP7 199 aa11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 P01630 113 aa11.94□□□□□ -0.5
Ubr3-201ENSMUST00000055758 PolqQ8CGS6 2544 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 87.9 ms