RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Ighv1-75A0A075B5Y2 117 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 Ighv1-85A0A075B5Y6 117 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 Ighv7-4A0A0A6YXL5 121 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 P01837 106 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 P18529 117 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 Gm10767Q3TQP0 103 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 OtosQ8R448 89 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 CstadQ9D245 104 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 Pcnx2Q5DU28 2122 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 Ash1lQ99MY8 2958 aa4.84□□□□□ -1.63
Ccdc38-203ENSMUST00000132214 Smg1Q8BKX6 3658 aaKnown RBP4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv5-4A0A075B5P9 117 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv1-26A0A075B5V0 117 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv5-12-4A0A0A6YWG4 117 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Trbv13-1A0A0B4J1P8 112 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 P01820 115 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ndufb4Q9CQC7 129 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Plac1Q9JI83 173 aa4.84□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Sdk1Q3UH53 2193 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Fam208bQ5DTT3 2382 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv1-58A0A075B5W9 117 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv5-9-1A0A0A6YVS4 126 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm7849D3YX03 116 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Defa28D3Z1V9 94 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 P06334 169 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ube2e1P52482 193 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Tff3Q62395 81 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ube2e2Q91W82 201 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Med12lQ8BQM9 2157 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 OtoglF7A4A7 2325 aa4.83□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Trav14-2A0A075B694 121 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv1-37A0A0A6YW32 117 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Trav14-1A0A0G2JF94 121 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm10320E9PW43 113 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Saa3P04918 122 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Prok1Q14A28 105 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Rph3alQ768S4 302 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Lyzl1Q9CPX3 148 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Prr15Q9D1T5 122 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ankhd1E9PUR0 2548 aaKnown RBP4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Bahcc1Q3UHR0 2643 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Dopey1Q8BL99 2399 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv5-12A0A075B5Q4 117 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 A0A1Y7VLU2 103 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 1700042G07RikB1AUF7 90 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Bri3P28662 125 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 AmelxP63277 210 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ormdl2Q9CQZ0 153 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Q9D8Q6 235 aa4.82□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Dnajc13D4AFX7 2248 aaKnown RBP4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm17359A0A0G2JEB7 487 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 4930447F04RikA2AFR2 126 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm7257D3YX25 99 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Edn3P48299 214 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 NdpP48744 131 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Snrpd3P62320 126 aaKnown RBP4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Trav6-2Q5R1I4 113 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 4930442H23RikQ9D5G7 103 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Slc25a15Q9WVD5 301 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv5-8A0A075B676 92 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv9-3A0A0B4J1J5 117 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm44965A0A0N4SVR3 59 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm11444F6QMA6 170 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm933J3QPC1 141 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Vpreb2P13373 142 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Wfdc3Q14AE4 130 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Crip2Q9DCT8 208 aaKnown RBP4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Map1aQ9QYR6 2776 aa4.81□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv1-39A0A075B5V5 117 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ighv7-2A0A0A6YX91 119 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm45623A0A1B0GSF6 103 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm2564F6Z9S8 108 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm15056F6ZR08 88 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Tnfsf12O54907 249 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Ccl19O70460 108 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Eif4ebp1Q60876 117 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Cxxc4Q6NXI8 198 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Eif4ebp3Q80VV3 101 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Timm21Q8CCM6 249 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Q8VC23 124 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Spint4Q9D263 159 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Iah1Q9DB29 249 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Usp9xP70398 2559 aaKnown RBP4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 LrbaQ9ESE1 2856 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 PkdrejQ9Z0T6 2126 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm38119A0A0A6YX29 146 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Tcte2E9PY37 120 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm9925F6T2U3 160 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm21060J3KMU4 56 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 P01812 117 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 CrpP14847 225 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Timm17bQ9Z0V7 172 aa4.8□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Setd2E9Q5F9 2537 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 DscamQ9ERC8 2013 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Trav6-4A0A075B6B4 115 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm33815A0A087WNV3 176 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Col8a2P25318 699 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Reg3bP35230 175 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 Gm10384Q3UQ87 92 aa4.79□□□□□ -1.64
Ccdc38-203ENSMUST00000132214 CnfnQ6PCW6 111 aa4.79□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 83.2 ms