Protein–RNA interactions for Protein: F6ZR08

Gm15056, Predicted gene 15056, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm15056F6ZR08 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Gm15056F6ZR08 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Gm15056F6ZR08 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Gm15056F6ZR08 Gm25239-201ENSMUST00000174915 86 ntBASIC25.01■■□□□ 1.59
Gm15056F6ZR08 Psd-208ENSMUST00000224556 2034 ntBASIC24.52■■□□□ 1.52
Gm15056F6ZR08 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm15056F6ZR08 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Gm15056F6ZR08 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm15056F6ZR08 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Gm15056F6ZR08 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Gm15056F6ZR08 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Gm15056F6ZR08 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Gm15056F6ZR08 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm15056F6ZR08 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm15056F6ZR08 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm15056F6ZR08 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm15056F6ZR08 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm15056F6ZR08 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm15056F6ZR08 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Gm15056F6ZR08 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.99■■□□□ 1.27
Gm15056F6ZR08 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Gm15056F6ZR08 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm15056F6ZR08 Gm15042-201ENSMUST00000120212 883 ntBASIC22.77■■□□□ 1.24
Gm15056F6ZR08 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm15056F6ZR08 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Gm15056F6ZR08 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Gm15056F6ZR08 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm15056F6ZR08 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm15056F6ZR08 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm15056F6ZR08 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.34■■□□□ 1.17
Gm15056F6ZR08 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm15056F6ZR08 Gm15045-201ENSMUST00000117359 883 ntBASIC22.33■■□□□ 1.17
Gm15056F6ZR08 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.24■■□□□ 1.15
Gm15056F6ZR08 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm15056F6ZR08 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.2■■□□□ 1.15
Gm15056F6ZR08 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm15056F6ZR08 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Gm15056F6ZR08 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.17■■□□□ 1.14
Gm15056F6ZR08 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm15056F6ZR08 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm15056F6ZR08 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm15056F6ZR08 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm15056F6ZR08 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm15056F6ZR08 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.06■■□□□ 1.12
Gm15056F6ZR08 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm15056F6ZR08 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm15056F6ZR08 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.03■■□□□ 1.12
Gm15056F6ZR08 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm15056F6ZR08 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.91■■□□□ 1.1
Gm15056F6ZR08 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm15056F6ZR08 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm15056F6ZR08 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm15056F6ZR08 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Gm15056F6ZR08 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm15056F6ZR08 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm15056F6ZR08 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm15056F6ZR08 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm15056F6ZR08 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm15056F6ZR08 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm15056F6ZR08 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm15056F6ZR08 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm15056F6ZR08 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.49■■□□□ 1.03
Gm15056F6ZR08 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm15056F6ZR08 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm15056F6ZR08 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm15056F6ZR08 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.41■■□□□ 1.02
Gm15056F6ZR08 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm15056F6ZR08 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm15056F6ZR08 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm15056F6ZR08 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gm15056F6ZR08 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm15056F6ZR08 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm15056F6ZR08 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm15056F6ZR08 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Gm15056F6ZR08 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm15056F6ZR08 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm15056F6ZR08 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm15056F6ZR08 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm15056F6ZR08 Gm24109-201ENSMUST00000175489 103 ntBASIC21.2■□□□□ 0.98
Gm15056F6ZR08 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm15056F6ZR08 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gm15056F6ZR08 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm15056F6ZR08 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm15056F6ZR08 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm15056F6ZR08 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm15056F6ZR08 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm15056F6ZR08 Gm23366-201ENSMUST00000175022 89 ntBASIC21.08■□□□□ 0.97
Gm15056F6ZR08 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm15056F6ZR08 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm15056F6ZR08 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm15056F6ZR08 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm15056F6ZR08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Gm15056F6ZR08 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm15056F6ZR08 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm15056F6ZR08 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm15056F6ZR08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Gm15056F6ZR08 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm15056F6ZR08 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm15056F6ZR08 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Gm15056F6ZR08 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms